Gene Details:

  • Gene ID: Cagra.4395s0205.1.p
  • Gene Family: NF-X1 Family
  • Description: NF-X1 Family protein
  • Species: Capsella grandiflora
  • Source: NF-X1 family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_023645860.1  — NF-X1-type zinc finger protein NFXL1
  • Swissprot:  Q9SY59  — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
  • TrEMBL:  A0A178WL38  — A0A178WL38_ARATH; NFXL1
  • STRING:  Cagra.4395s0205.1.p  — (Capsella grandiflora)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0009642  — Biological Process — response to light intensity
  • GO:0009651  — Biological Process — response to salt stress
  • GO:0009697  — Biological Process — salicylic acid biosynthetic process
  • GO:0010188  — Biological Process — response to microbial phytotoxin
  • GO:0010310  — Biological Process — regulation of hydrogen peroxide metabolic process
  • GO:0042742  — Biological Process — defense response to bacterium
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0005515  — Molecular Function — protein binding
  • GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

  • The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
  • The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.

Literature:

Sequences:

CDS Sequence:
  • >Cagra.4395s0205.1.p|Capsella_grandiflora|NF-X1|Cagra.4395s0205.1.p
    ATGAGCTTTCATCTCAGGAGAGATAGGAACGATGATAGGTCTCGATTCAATTCTCAGCATACTTGGATTCCTAGAAGCTCATCTACCTCAGTGGGGGTCGTAAACGAGCCTTCTCTTCCTCCTACTACTGATAGATATTCTGGAAGCCTTGATACTGGTGCTGCATCCCGTCCTGCTCCTCCGCCCTATAACCAGCAACAGAGGAGTAATAACATTGGTCCAGCTCCACCTAATCGACAAAGAAGAAATGAGGCTGCCGGAACCCTGCCCGATAACCAGCACCACAGGAGCAATTTCGTTGGGCCCCCTCCACCTAATCGACAAAGAAGAAATGAGGCTGCGGGAACTCTGCCTAATAACCAGCACCAAAGGAGTAATTTTACTGGTCCACCTCCACCGAATCGACAACGAAGAAATAATGCTTCAGGAACTCTTCCGGATGATCGTCAAAGAGTTTCATCTAGGGTGCGGCCTGTGAATCAGGGGAAAAGGGTAGCTAAGGAGGAGAATATTGTGATGGCAGACCCAAACTTGCCTCAACTTGTTCAAGAGTTACAGGAGAAACTGGTAAAGAGTTCTATTGAGTGTATGATTTGCTATGATAAGGTTGGGCGATCTGCCAATATCTGGTCTTGCTCTAGCTGTTATTCCATTTTCCATATGAATTGTATCAAGAGGTGGGCTCGAGCACCAACTTCAATTGATTTACTGGCTGAGAAAAATCAAGGTGATAATTGGAGATGTCCAGGTTGCCAATCTGTACAGCTGACATCATCCAAAGAGATATGCTATCGGTGCTTTTGTGGAAAGAGAAAAGATCCACCATCTGATCCATATCTGACTCCACACTCATGCGGAGAACCATGTGGGAAGCCTCTGGAGAAAGAGTTTGCGGCAGCTGAGATAACTAAAGAAGAGTTATGTCCTCATGTCTGTGTGTTGCAGTGTCATCCTGGTCCATGTCCTCCCTGTAAGGCATTTGCTCCACCTCGTAGTTGTCCTTGTGGTAAGAAGATGGTTACTACTAGATGTTCCGAGCGGAGATCTGTTATTGTTTGTGGGCAGCGTTGTGATAAGCTTCTCAATTGCGGGCGTCATCAATGTGAAAGGGCTTGTCACGTTGGCCCTTGTGATCCTTGTCAGGTACTGGTAGATGCCACATGTTTCTGCAAGAAAAAAGTGGAGACTGTTATTTGCGGGGATATGAATGTGAAGGGAGAGTTGAAAGCAGAAGATGGTGTGTATTCTTGCAATTTTAACTGTGGGAAGCCGCTTGGATGTGGTAATCATTTCTGTTCCGAGGTTTGCCATCCCGGACCTTGCGGGGACTGTGACTTGCTTCCCAGTAGAGTGAAGACATGCTATTGTGGGAAAACGCGTTTAGAAGAACAGATCAGGCGTAGTTGCTTGGACCCAATTCCTTCTTGTTCAAATATATGCAGGAAGCTTCTTCCTTGTAGGTTACATACTTGCAATGAGGTATGCCATGAAGGCGATTGCCCGCCTTGTTTAGTCCAAGTAAACCAGAAATGCCGGTGTGGGTCAACATCCAGGGCAGTGGAATGCTACATAACAACTTCTTCAGATACAGAGAAGTTTGTGTGTGCTAAGCCATGTGGGTGTAAGAAGAATTGTGGGAGACATAGATGTAGCGAGCGCTGCTGTCCTCTCATGAACAAGAAGAAGAATGATCTATCAGGCGATTGGGACCCACACGTCTGCCAAATACCTTGTGGGAAGAAGCTAAGATGCGGGCAGCATTCCTGTGAATCTTTATGTCACAGTGGACATTGCCCTCCTTGTCTCGAGATGATCTTCACTGATCTTACGTGTGCTTGTGGAAGAACTTCGATTCCTCCACCACTACCATGTGGGACACCTGTTCCTAGCTGTCAGCATCCATGCTCGATTCCTCAGTCTTGTGGCCATTCTGCTACGCATGGATGCCATTTTGGAGATTGTCCTCCTTGTTCTGCCCCTGTGGAAAAGAAGTGCGTTGGTGGTCATGTGGTTCTCAGAAACATACCTTGTGGGTTGAAAGACATTAGATGTAACAAGATTTGTGGAAAGACGAGGCGTTGTGGCATGCATGCTTGTGCCAGAACTTGTCACCCAGAACCTTGTGACAACTACAATGAATCTGAAGCTGGTATGCGTGTTACATGTGGACAGAAGTGTGGTGCTCCTAGAAGGGATTGTAGACACACTTGTGGAGCACTCTGCCATCCATCTGCGCCTTGCCCTGACCGTAGATGTGAATTTCCAGTCACAATTACTTGTTCATGTGGCCGCATAACCGCTACGGTCCCTTGTGATGCTGGAGGAAACAGTGCCAACGGTTCTAATATTGACTCTGCGGCCTATGATGAAGCCTCTATTTTGCAGAAGCTTCCAGCGCCACTTCAGCCTGTTGACGGAAATCGAATCCCTCTCGGGCAGAGAAAGCTCTTGTGTGATGACGAGTGTGCTAAGCTGGAGCGTAAGCGGGTTCTTCAAGATGCATTTGATATCACTCCGCCAAATCTGGAGGCATTACATTTCAGTGAGAATTCTGCTATGACAGAGATTATCTCAGACCTTTATAGGCGTGATCCAAAGTGGGTACTGGCTGTCGAAGAGCGCTGCAAGTTTCTGGTACTTGGGAGAGCCAGAGGAAGCACAAGTGCCCTTAAGGTCCATGTCTTCTGCCCGATGCAGAAAGATAAACGAGAAACGGTTAGGCTAATAGCTGAGAGGTGGAAGCTTGGTGTTAGCAACGCAGGGTGGGAGCCAAAACGGTTTACAGTAGTTCATGTAACACCAAAATCAAAACCGCCAACACGGATCATTGGAGCTAGGGGTGGTGCTATCTCGATAGGAGGGCCACACCCACCGTCTTTTGATCCGCTGGTGGATATGGATCCTGGACTCGTGGTATCTTTGCTGGATCTTCCGAGAGAGGCAAATATCAGCGCCTTGGTACTGAGATTTGGGGGTGAATGCGAGCTTGTTTGGCTGAATGACAAGAATGCTTTAGCCGTGTTCCACGACCATGCCAGAGCTGCTACTGCGATGAGGAGGCTTGAGCACGGTTCAGTATACCATGGAGCTGTGGTTGTCCAGAGCGGCGGGCAATCTCCATCACTTAGTAATGCATGGGGAAAATTACCTGGCGGCTCGGCGTGGGATGTTAACAAAGGAAATCCATGGAAGAAAGCTGTGATTCAGGAGAGTGATGACTCCTGGGGAGCTGAAGATTCCCCCATTGGAGGATCATCTACAGATATTCAAGCCTCTGCTTTAAGAGCTGCAAAGAGCAACAATCCAATTGCTACCTCGGTTAACCGTTGGAGCGTTTTGGAGCCTGAGAAGGCCAGCACGTCCAATTTAGAGTGTATTGGTCAGATAGAAGAAAGCACAAGCTCAAAAGCTAACGGTAAACAACCGGTGGAAGGGTCTGGTGAAGAAGTGGTGGATGACTGGGAGAAGGTATGTGAATGA
Protein Sequence:
  • >Cagra.4395s0205.1.p|Capsella_grandiflora|NF-X1|Cagra.4395s0205.1.p
    MSFHLRRDRNDDRSRFNSQHTWIPRSSSTSVGVVNEPSLPPTTDRYSGSLDTGAASRPAPPPYNQQQRSNNIGPAPPNRQRRNEAAGTLPDNQHHRSNFVGPPPPNRQRRNEAAGTLPNNQHQRSNFTGPPPPNRQRRNNASGTLPDDRQRVSSRVRPVNQGKRVAKEENIVMADPNLPQLVQELQEKLVKSSIECMICYDKVGRSANIWSCSSCYSIFHMNCIKRWARAPTSIDLLAEKNQGDNWRCPGCQSVQLTSSKEICYRCFCGKRKDPPSDPYLTPHSCGEPCGKPLEKEFAAAEITKEELCPHVCVLQCHPGPCPPCKAFAPPRSCPCGKKMVTTRCSERRSVIVCGQRCDKLLNCGRHQCERACHVGPCDPCQVLVDATCFCKKKVETVICGDMNVKGELKAEDGVYSCNFNCGKPLGCGNHFCSEVCHPGPCGDCDLLPSRVKTCYCGKTRLEEQIRRSCLDPIPSCSNICRKLLPCRLHTCNEVCHEGDCPPCLVQVNQKCRCGSTSRAVECYITTSSDTEKFVCAKPCGCKKNCGRHRCSERCCPLMNKKKNDLSGDWDPHVCQIPCGKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGRTSIPPPLPCGTPVPSCQHPCSIPQSCGHSATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGMHACARTCHPEPCDNYNESEAGMRVTCGQKCGAPRRDCRHTCGALCHPSAPCPDRRCEFPVTITCSCGRITATVPCDAGGNSANGSNIDSAAYDEASILQKLPAPLQPVDGNRIPLGQRKLLCDDECAKLERKRVLQDAFDITPPNLEALHFSENSAMTEIISDLYRRDPKWVLAVEERCKFLVLGRARGSTSALKVHVFCPMQKDKRETVRLIAERWKLGVSNAGWEPKRFTVVHVTPKSKPPTRIIGARGGAISIGGPHPPSFDPLVDMDPGLVVSLLDLPREANISALVLRFGGECELVWLNDKNALAVFHDHARAATAMRRLEHGSVYHGAVVVQSGGQSPSLSNAWGKLPGGSAWDVNKGNPWKKAVIQESDDSWGAEDSPIGGSSTDIQASALRAAKSNNPIATSVNRWSVLEPEKASTSNLECIGQIEESTSSKANGKQPVEGSGEEVVDDWEKVCE*