Information report for CA06g06960
Gene Details
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Functional Annotation
- Refseq: XP_016575561.1 — PREDICTED: NF-X1-type zinc finger protein NFXL2
- Swissprot: Q9FFK8 — NFXL2_ARATH; NF-X1-type zinc finger protein NFXL2
- TrEMBL: A0A2G2WI94 — A0A2G2WI94_CAPBA; NF-X1-type zinc finger protein NFXL2
- STRING: Solyc06g051570.2.1 — (Solanum lycopersicum)
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009651 — Biological Process — response to salt stress
- GO:0009908 — Biological Process — flower development
- GO:0010310 — Biological Process — regulation of hydrogen peroxide metabolic process
- GO:0042335 — Biological Process — cuticle development
- GO:0045892 — Biological Process — negative regulation of transcription, DNA-templated
- GO:0045893 — Biological Process — positive regulation of transcription, DNA-templated
- GO:2000037 — Biological Process — regulation of stomatal complex patterning
- GO:0005634 — Cellular Component — nucleus
- GO:0000987 — Molecular Function — core promoter proximal region sequence-specific DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
- The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.
Literature and News
Gene Resources
Homologs
- Cucumis sativus: Cucsa.136670.1
- Glycine max: Glyma.18G027000.1.p, Glyma.18G027000.3.p, Glyma.18G027000.2.p, Glyma.18G027000.4.p
- Lotus japonicus: Lj6g3v0521560.1
- Nicotiana benthamiana: Niben101Scf02221g01001.1
- Nicotiana tabacum: XP_016462046.1, XP_016456072.1
- Petunia inflata: Peinf101Scf09649g00006.1
- Ricinus communis: 28162.m000128
- Salvia miltiorrhiza: SMil_00020853-RA_Salv
- Sesamum indicum: XP_011076693.1
- Solanum lycopersicum: Solyc06g051570.2.1
- Solanum melongena: Sme2.5_10561.1_g00009.1
- Ziziphus jujuba: XP_015877400.1
Sequences
CDS Sequence:
- >CA06g06960|Capsicum_annuum|NF-X1|CA06g06960
ATGACGTCCACCGTTGCTCCAACTCTGTCCAACTCGGATTCCGACTCCTCCCATTGCCACCATCACTCCGACCTGTCTTCGACCATCTTCAAGTCGTACCTTGAACTTTCGGGTGAGCAGCAAAACGAAAAACATGATCTTATAAAAATCCAAGCTTTTCTTACTTCTTCTCGTTCGGGTGCCCTCTCATGCCTCATTTGCCTTGAAAGAATCCGTCCTTCTGATCCCACATGGTCCTGTTCCTCTCTCTGTTTCGCCGTCTTTCATCTCCACTGCATTCAATCGTGGGCCGTACAATCCTCCAATTTGGCTGCCGCCCGTGCCGCCACGCGCGCTGCCACTCCAAATGAAAGCTCCCTTCTATGGCACTGCCCTAAATGCCGCATTGAGTATCCTAAATCCCAGATCCCTAAAACATACTACTGTTTCTGTGGAAAACTTCCAGATCCACCTCATGATCCTTGGGTTTTACCTCATTCTTGCGGTGAAATTTGTGGGAGGCCGTTGAAGTACAATTGTGGACACCATTGCTTATTGTTGTGCCACCCTGGACCGTGTCCCTCTTGTCCTAAATTGGTGAAATCCAAGTGTTTTTGTGGGGCTTTGGAAGATGTCAAACGATGTGGCTTTAAGAATTTCTCGTGCAATGGTATTTGTAAAAACTTGTTGGATTGCAACACTCATAGGTGCAGTGAAATTTGCCATGAGGGTGATTGCCCTCCTTGTAAAGCTAAAGGCATGTTTAAGTGTCAGTGCGGGAAGGTGGAGATGAAAAGAGAGTGTTTTGATAGGGTCTTTAGGTGTGAAAATCCATGTGACAAGTTACTTGGGTGTGGGCGGCATAAGTGTGAGAAAGGTTGTCATGAGGGTGACTGTGGAGATTGTCCACTTCAAGGGAAGAGGACTTGCCCTTGTGGGAAGAGAGTTTATGAAGGGATTGCCTGTGACGTTGCAGTTTTAGTATGTGGAGCAACATGTGGTAAAATGCTGAGCTGTGGATTTCATAGGTGCCCTGAAAGGTGCCACAGAGGTCCCTGCATTGAAACTTGTAGGGTGGTCGTTACCAAATCATGTAGGTGCGGGAGTTTTATGAAACTGGTTCCTTGCTACCAAGACATGACATGTGAAAGGAAGTGTCAGAAAATGCGGGACTGTGGAAGACATGCCTGTAAACGCCGCTGCTGTGATGGGGATTGCCCACCTTGTTCTGAGGTCTGTTCATATTTTGATAATTTTGTAAATTATTATTATTCCTAA
Protein Sequence:
- >CA06g06960|Capsicum_annuum|NF-X1|CA06g06960
MTSTVAPTLSNSDSDSSHCHHHSDLSSTIFKSYLELSGEQQNEKHDLIKIQAFLTSSRSGALSCLICLERIRPSDPTWSCSSLCFAVFHLHCIQSWAVQSSNLAAARAATRAATPNESSLLWHCPKCRIEYPKSQIPKTYYCFCGKLPDPPHDPWVLPHSCGEICGRPLKYNCGHHCLLLCHPGPCPSCPKLVKSKCFCGALEDVKRCGFKNFSCNGICKNLLDCNTHRCSEICHEGDCPPCKAKGMFKCQCGKVEMKRECFDRVFRCENPCDKLLGCGRHKCEKGCHEGDCGDCPLQGKRTCPCGKRVYEGIACDVAVLVCGATCGKMLSCGFHRCPERCHRGPCIETCRVVVTKSCRCGSFMKLVPCYQDMTCERKCQKMRDCGRHACKRRCCDGDCPPCSEVCSYFDNFVNYYYS*