Gene Details:

• Gene ID: AHYPO_013985-RA
• Gene Family: NF-X1 Family
• Description: NF-X1 Family protein
• Species: Amaranthus hypochondriacus
• Source: NF-X1 family gene from PlantTFDB

Protein Features:

• SuperFamily:  SSF57850
• PROSITE profile:  PS50016
• PROSITE pattern:  PS01359
• PROSITE profile:  PS50089
• SMART:  SM00438
• Pfam:  PF01422
• Pfam:  PF01424
• Gene3D:  G3DSA:3.30.70.330
• InterPro:  IPR019787    IPR019786    IPR001841    IPR000967    IPR001374    IPR012677

Annotation Proteins:

• Refseq:  XP_021726725.1  — NF-X1-type zinc finger protein NFXL1-like
• Swissprot:  Q9SY59  — NFXL1_ARATH; NF-X1-type zinc finger protein NFXL1
• TrEMBL:  A0A0J8E6T7  — A0A0J8E6T7_BETVU; Uncharacterized protein
• STRING:  XP_010693736.1  — (Beta vulgaris)

Gene Ontology:

• GO:0006355  — Biological Process — regulation of transcription, DNA-templated
• GO:0005634  — Cellular Component — nucleus
• GO:0000166  — Molecular Function — nucleotide binding
• GO:0003676  — Molecular Function — nucleic acid binding
• GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
• GO:0005515  — Molecular Function — protein binding
• GO:0008270  — Molecular Function — zinc ion binding

Family Introduction:

• The human NF-X1 protein and homologous proteins in eukaryotes represent a class of transcription factors which are characterised by NF-X1 type zinc finger motifs. The Arabidopsis genome encodes two NF-X1 homologs, which we termed AtNFXL1 and AtNFXL2.
• The Arabidopsis AtNFXL1 and AtNFXL2 proteins are characterized by NF-X1 type zinc fingers, which potentially mediate DNA binding, and PHD finger motifs, which potentially mediate protein interactions. The AtNFXL1 protein is part of a regulatory mechanism, which improves the physiological status of plants and supports growth and survival under stress.

Literature:

• The AtNFXL1 gene encodes a NF-X1 type zinc finger protein required for growth under salt stress.   DOI:  10.1016/j.febslet.2006.07.079 ;  PMID:  16905136

Sequences: