Information report for XP_016515320.1
Gene Details
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Functional Annotation
- Refseq: XP_016515315.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- Refseq: XP_016515316.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- Refseq: XP_016515317.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- Refseq: XP_016515318.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- Refseq: XP_016515319.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- Refseq: XP_016515320.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1
- TrEMBL: A0A1S4DPH3 — A0A1S4DPH3_TOBAC; AT-rich interactive domain-containing protein 2-like isoform X1
- STRING: XP_009591214.1 — (Nicotiana tomentosiformis)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Manihot esculenta: Manes.01G255100.1.p
- Nicotiana benthamiana: Niben101Scf11738g00001.1, Niben101Scf04988g01015.1
- Populus trichocarpa: Potri.003G129800.1
- Prunus mume: XP_008238928.1, XP_016650277.1, XP_008233025.1
- Prunus persica: Prupe.5G103500.1.p
- Pyrus bretschneideri: Pbr018219.1, Pbr018197.1
- Vitis vinifera: GSVIVT01027004001
- Ziziphus jujuba: XP_015896116.1, XP_015866473.1, XP_015866475.1, XP_015866474.1
Sequences
CDS Sequence:
- >XP_016515320.1|Nicotiana_tabacum|MYB_related|XP_016515320.1
ATGGAAGCATGGTCAAGTTTAAATGATGAGTCTCAGGTATATAAAGGAAATGAGAGTGGTTCTGGTATTAATCTTACAGTAGAAGTAAATGGCATTGATGGCTGTAGTAAGAATAGGCTAAAGAGCTTGTTTGATCAAGTTCTTTCTGTTTTTCTAAGTGAGGTAACTGAGAAAAAATGTGTAAGGCCTCTTCCAGTTATGACCGGTAGTGGGAAGCCTCTGGATTTGTTTAAACTTTACTGGATTGTGAGGAAAATAGGGGGATATGACCGCGTTTCGAGCAAGAATTTGTGGGGCTTTATTGCAGAGCATTGTGGGTTGGATGTTGGGGCTGTTGCATTTGTGAAGTTGGTTTATGTTAAGTATTTGGCTGAATTTGATCATTGGCTAAGGCAGTTATGTAAAGAAGGAAACTTGGAGAAACGAGAGGGTGGGGTTGTTCGCCGACTTGATTTGTTGTCAAAGGAGTTGGAGACAAGGTTTAGGAGGTTGTTGCTCCGTAGGTGTCAGAAAAAGAAAGATGCTAATTTGCTTCCTTCGAAAAATGGTCAGGTTGATTTTGAAATGCTTACTACTGAAAGTGTTAATAAAACCAATGATTACACAACACGAAGAAGTTTCAATGCTGAAAACAGGAACGGTAACCTTTACAATGGCGATGAAAGATCCGTTTCTAAGATTGACGACGACTACGTTTTTTTGGCATCTGCCGAGGGGATTGTCGAGAAGGTCCTTTATAAAGCACCTGAAAAATCAAATAATGAATATGATGACGACGAAAAATTCTTTGCCCGCGATATTAAAAATAAAGTGACATCTAACGGAGAGGTGATTCAGAGAGCTGCGTCGGCCATGAGTGTTATTGAGAATGTATTTGATTCTCGCAAGAGAAAAAGAGAATCTTCATGTTTCTCAGGAATGTTGAATTGGATTAATCATGCGGCAAAACATTCTAATGATCCTGAAATTGGAGAAGTTCCTGAATCTTCCAAGTGGAAAGGTCATACAAGCAACGAGTTCTGGTTCCAGGTCTTGTTGGTTAAGGAAGCATTGCTGAAGAGAAGGCATACTGATACAAATGCAGAGGAATCTAATCCTCAGCAGAAAAAGCAGAGAATGCATCCGTTCATGTATGAAGAGAGACTCAACAATCAACCTGCTGAAAAACTAAGATGCAGCAAAAGGATCCCCGTTTCACCAAAACATGTTCCTTGTCCGTGTTGTAACTCATGTTCGACCTCTCAAAACAAAGCTTCAACTCATCAGAAGGAAGAAGAACAAGATACTGGGCCAGATCTTACAAGTATTGAGGTATCAGTAACAGAAAAAACTGATGACTTAGGGGATCAGCAAACACACCCTGAAGTTTCTGTGGGTCCTCTCCACCAAGCTGAAGTCCCTGAATGGTCGGGGGTGATTTCTGAGAGTGATTCCAAGTGGTTAGGCACGCGAATGTGGCCTCCCGAAGTGGAAACAACAAAATCTTTGGTTGAGTTAGATCCTATCGGGGAGGGAAGACGAAGTTCATGTGGTTGTCGATTTCCACAATCTGTTGAATGCATCAGGTTCCATATTGCGGAGAAGAGGTTTAAATTGAAGCTCGAGCTCGGTCCTTTGTTCAACCGATGGAGGTTTGATCGCATGGGAGAAGAAATTTCACTTTCTTGGACAGCTGAAGAGGAAGAGAGATTCAAAGATATGGTAAGGTCAAGTTCTACGTCGAATAACAAATGGAAGAATTCTAAGAAACTACTTCCATCCAAGACTAGGAATATGTTGGTTAGCTATTACTTCAATGTATTCCTTATCAGACGTCGGAGCTATCAAAACCGAGTTACTCCAAAAGAACTCGATAGCGATGATGATGAGATTGAGCTTGGGTCTGTCGGCGACAGTTTTGGTAATATTGCAGTTCATGTACCAAGCTCCAGGTCACTAACATGCGTCGAGAATAAGGTATGCTCTGATCTGGAGTAA
Protein Sequence:
- >XP_016515320.1|Nicotiana_tabacum|MYB_related|XP_016515320.1
MEAWSSLNDESQVYKGNESGSGINLTVEVNGIDGCSKNRLKSLFDQVLSVFLSEVTEKKCVRPLPVMTGSGKPLDLFKLYWIVRKIGGYDRVSSKNLWGFIAEHCGLDVGAVAFVKLVYVKYLAEFDHWLRQLCKEGNLEKREGGVVRRLDLLSKELETRFRRLLLRRCQKKKDANLLPSKNGQVDFEMLTTESVNKTNDYTTRRSFNAENRNGNLYNGDERSVSKIDDDYVFLASAEGIVEKVLYKAPEKSNNEYDDDEKFFARDIKNKVTSNGEVIQRAASAMSVIENVFDSRKRKRESSCFSGMLNWINHAAKHSNDPEIGEVPESSKWKGHTSNEFWFQVLLVKEALLKRRHTDTNAEESNPQQKKQRMHPFMYEERLNNQPAEKLRCSKRIPVSPKHVPCPCCNSCSTSQNKASTHQKEEEQDTGPDLTSIEVSVTEKTDDLGDQQTHPEVSVGPLHQAEVPEWSGVISESDSKWLGTRMWPPEVETTKSLVELDPIGEGRRSSCGCRFPQSVECIRFHIAEKRFKLKLELGPLFNRWRFDRMGEEISLSWTAEEEERFKDMVRSSSTSNNKWKNSKKLLPSKTRNMLVSYYFNVFLIRRRSYQNRVTPKELDSDDDEIELGSVGDSFGNIAVHVPSSRSLTCVENKVCSDLE