Gene Details:
- Gene ID: WALNUT_00023528-RA
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Juglans regia
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_018814795.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814796.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814797.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814798.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814799.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814800.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814801.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814802.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814803.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814805.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814806.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814807.1 — PREDICTED: transcription factor MYB59-like
- Refseq: XP_018814808.1 — PREDICTED: transcription factor MYB59-like
- TrEMBL: A0A2I4E5W9 — A0A2I4E5W9_JUGRE; transcription factor MYB59-like
- STRING: XP_008350343.1 — (Malus domestica)
- STRING: XP_008387530.1 — (Malus domestica)
Gene Ontology:
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >WALNUT_00023528-RA|Juglans_regia|MYB_related|WALNUT_00023528-RA
ATGTTGCAAACAACAATGGCTTATCAAGTAGCCATGCAAGGAGGGAGATTGCGCAAAGGGCCTTGGGTTGAAGAAGAAGATGAGCGGCTCACGACCTTTGTCTCCCTCATGGGGGAACGGAGGTGGGATTCCATTGCCAGAGCATCAGGTCTACAAAGAAGTGGTAAAAGCTGCAGGTTGCGGTGGATGAACTATCTCCGTCCTGATCTTAAGCATGGTCAACTAAGCATTGATGAAGAGCGGATCATTCTTCAACTTCATGAGTTATGGGGTAACAAGTTAGGGAACTTTCATTCTAAAATAAACAATGCTGAACAAGACTTCTTCTTTCATGAACAAGGTGGCATGACTACTGTAAGATATCAGTGTGGAAACAAGGGCTCTGTTGATAAGGACTCGTGGGGTACCATGAACGATATCTCCTCCGATGCACTCGGGTTCTCGGACCTTCAATTTACTTGTTCTCCATATGAAACCCGCTTATCAGATTGGATCTCAGGAGTTTCAGATGATCAAAGCAAAATAAAGCATCAGGAAGACTGTAATACTATAGAATCATGTTGCTGTTATCTTGCTTGGATTTCAGACAATTCAAATACATGGGACTACTCAGGTTCCCTGTGGGACATGGATTAA
Protein Sequence:
- >WALNUT_00023528-RA|Juglans_regia|MYB_related|WALNUT_00023528-RA
MLQTTMAYQVAMQGGRLRKGPWVEEEDERLTTFVSLMGERRWDSIARASGLQRSGKSCRLRWMNYLRPDLKHGQLSIDEERIILQLHELWGNKLGNFHSKINNAEQDFFFHEQGGMTTVRYQCGNKGSVDKDSWGTMNDISSDALGFSDLQFTCSPYETRLSDWISGVSDDQSKIKHQEDCNTIESCCCYLAWISDNSNTWDYSGSLWDMD