Information report for Vocar.0050s0012.1.p
Gene Details
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Functional Annotation
- Refseq: XP_002956540.1 — hypothetical protein VOLCADRAFT_97533
- TrEMBL: D8UCZ5 — D8UCZ5_VOLCA; Uncharacterized protein
- STRING: XP_002956540.1 — (Volvox carteri)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Nicotiana tabacum: XP_016433967.1, XP_016433966.1
- Solanum tuberosum: PGSC0003DMP400045417
Sequences
CDS Sequence:
- >Vocar.0050s0012.1.p|Volvox_carteri|MYB_related|Vocar.0050s0012.1.p
ATGGAGGAAGAGGAGGGAGGAGCTGAGGTTGAGGAAGACAGTGCCTCGATTGAAGACTCCTCACGCCGCCGCACTGGCTCCGGCATGACCTCGCTGCCGCGTAATATTAACAGGCAAAGGGCTCCTAGTATAGTGGGCACGGTCGACGGACAGCGCCAAAGGAACGCACCCCGAGGCGAATGGTCTCCGGCCGAGGAGGCAGTCCTAGCCAGGAAGCACATGGAGCTCGGAAACAAGTGGACCACAATCTCTCACTTCTTACCTGCACGCAGCGACAATGACGTCAAGAACATCTGGCACAGCACGCTTCGCTCCAAGAACTCGGAGCGCCGCTCCTTTCTCCGCACGTATGCAAGAGCAGTACGTGACTGCGCGAACGACGCTGAGGCGCGCAAGCAAGCTTACGAAATGGCACAGCGAGTCTGCGGGCCGCCCCAGCCCATTGAGCAGGCGCTCGCGACCGTGCAGCAGCAATACCAGCAGCAGTTGCAGATGCAGGCCAATCAACAGGATGAGGTCCTGGCAGACGGTGATTCACCCGAGTTCGAGCCCGACGCGGAGCGCGACAGCGACCAGCCAGCCCCCGGGCCTGGCCCCGATGGACCTCAGCCCCATTCCCAGGCGCCTCAGCCCGCCCAAGAGTCCCTAGGGGAGGTGGCAGTACGCTCCGGCACATGCAGCCGTACAAACAGCGCGCCGGATTCCCAGCAGCACAGCGGTGGGGCGAAAAGTGAGGCAAAGAGAATCCGTTTGTCGGGGTTTGGGGGGTTGGGAAAGACGAACCACGAAGGAGCCTGTCCAATCCCCGAATTGAACCACTCGCATAACCCCCCCATCGCGATGCCATTGCACCCAAACATCCCCCTCAGGCACTTCCCCCCGCATCAACAAGACGAACAGCCTCCTCTGCCTTCCCCACGACTCGATGGCGCACCGGGGCTACAGCCGCAACTACCAACTGCTACAACGGCAACCGCCGCGGGCCGTGGCCCCATGACACTCAATCGCAATAGCTACTGCCTCGGACCGGAGGGGGTCTTCGGACTTATGACTTGTGGATCGGGGGGTGGTGTAGATAGCGCATCCTTGCATATGCAGCAGCAGCAGCAGCAGCGACAACACAATCAACAGCAGCAGCTGCTGCAGCAACTTCAGCAGCTTCAGCAGCAGCAACAACAGCTTTATCTGGCGGGGTACGGCTGCCGTACAGGCGCAGAAGTGGATTCCTCCTGCCTGGCCCGGTTATCCGCCCTTCATTTGGCAACATCCGACTACCAGCTGCTCCACCGCCAGCAACAGCAGCAGCAACAGCAACAGCAGCAACAGCCAGATGCACAAGGCCAAAGAGATATTTTAGCATTCGCCAACTCACCTTCCTCTGGAGCTCAGTTCCTCCAACAGCAACAGCAACAGCAGCAACGCCCTACTTTAATGCAACCCTTCTACGGACTTCTAGCCACAATGTCAGCACCCAACAACAACAACAACAACAGCAACAGTAGCGGTAACTCGAACCAACAGCTCCTCCTAGCCCGTAACAGCGGCACCGCCAGCGGACTCATCACCCCAGCGGGAGGAGGAGGCGGAAGCCAACCTCTGGCGCCGCGCGCCGGTCACCACCAGACGCTGCTGGCTCCCCCCTCCTCGTCATCCCTACCGGCACTCGCGTCGACGGCCGCAGCCGCCGGCGGCGCCATTGGCCTCGCCGGTACGGGGCTAGGAGGCGGCTTATCGGGCGCGGGAGGGCAGCAGCCGCAGCCGCCCAGCAGCGGGGGGCTAGAGCTTGACGACTTTCTGGGCGGGGACCTGGATCTGACCGCGGAGGACCTGATGGCCATGTTGGGGCCCCAGACGTCGTCGCAGCGGTGCGGTCCCGGATCCGCCCTGCTCGACAGCAGCCTGGATGCCGCCGGGGCCCATGGAACCGTGTTCCACTGCGGCGACGGCGGCGGAGGCGGAGGCGGTCGGCCCTCCGGGCCCCCCCGCGGCGCCGCCGGGGACCGCCAACAGCAACAGCAGCTATCAGTCCCGCTACTGCCCCCACATCATCTTCAAGATATGCAACAACAGCAGCAACAGCAACAGCCCGATGCGTTTGATTCATTGCTAGCTGAACTTGAACAGAGGGGACGGTTACATGTCGTACAACCCCACCCACCACTAGCCGGAATGCTTAGCTTACCATTACCAGAAATGGGAACTCCGCAGCAGCAGCAACAGCCACAGCAGCAGCCGTTTTTTCAAGATGACGTGCTCGGTTTGGGGCCGCTAGGCACGCCGTACGCGTCGTACTCCGCCGCCGCCTTCACCTCCCCCTACCATTGCACTCCGGGACCGAACTCACTAGACCTTCATTCATTGGACAGACAGACAGGCAGACAGACAGACACAGACATGAACGCGCATATATACCTTCTTTTCCCTCCCCAACCTCAACTGCGCCCCAATTATCCCCAACACCACACAGGGCAGCAAGGTTATCTGGATCCCGGATCCAAGCAACACCTGCCGCAACTCAACCCCACCCACCTGCACCAGCACCAGCAGCTACAGCTGGGTCCTCAACCCCTGGGAGCTCCGCGGAGAGGCTCGGCCCTGGGAATGTTCGGCACCACCGCTGTCGCCGCATGCTGCAATGAAAGCTACAGCAATGGCAGCAGCGGACTCCTCTCGCCTCGGACGTTCGGTGCCCCCTTAGGCCTCACCAGCCTAAACGGCACGACACCGCAGCACCAGCACCAGCAGCGCCCGCCGGGGGCCACCGGCGGAACTCCGCGATCGCTACAAACTGTGGGCAGTGGAGGAGGAGGCGGCGGCGGCGGCTGCTCTGCCACCGCTGCCTGGCAGTCTGGCATTTGGGCGCCGGGGCTGCTCCGCGGCGTCGGCAGCGGCGCCATCGCCACCGCCGCCACCGACAGCAGCCCCGCCGCCACTGCCGCCGTGGGCACTGAGTCGCTTACTGGCGAGGCTGCGGGCAGCGGCGCCGGCGCCTGCATGACAGGGTCCGCGGGTGCAACGCCGCCGCCGCCGCCAGGCTCCGCCGTCACTGCCGTCGCTGCCGGTGACGGCGGCGGCTGCTGCGGCAGCGGCGGCTTCTCAGGTCAAACGGGCTCCGGTCTGCTGCCGGTCGACCTGCTGTCTTTCCTGGCGGCGCCCGCCAAGGTGGACGTCGTGACGATGGGACTGGACTCGGGCGACCTCTTGGACTGTATGGATTGTGAGGGGGAGGCGCTGCCGGAGACTGGGAGCGCCGGCGGCGGCTGCGGCGGCAACGGCGGCGGCGGCAGCATCAGCGGCTGCAGTGCGGCGGAACCCGCGGACCCCTTGACACTGCTCATGTCGGGGAGGGGCTCGCTGGCACAGCGCCCGCCACCGCCGCAACAGCAGCAGCAGCAGGTTTCGGGTGGACGAGGCGGCCTGGTGTTGCGGGGGGCAGGAGGAGGCGCGGGGGGAGGCGGTGCGCAGGCATGTGGACCAGCCATGAAAATGTCGTCCTCCCCGTCTTCGTCGTTTTCCCGTAGCGCGGGAACGATTGGTCCGCTACTGCAGCTGTAG
Protein Sequence:
- >Vocar.0050s0012.1.p|Volvox_carteri|MYB_related|Vocar.0050s0012.1.p
MEEEEGGAEVEEDSASIEDSSRRRTGSGMTSLPRNINRQRAPSIVGTVDGQRQRNAPRGEWSPAEEAVLARKHMELGNKWTTISHFLPARSDNDVKNIWHSTLRSKNSERRSFLRTYARAVRDCANDAEARKQAYEMAQRVCGPPQPIEQALATVQQQYQQQLQMQANQQDEVLADGDSPEFEPDAERDSDQPAPGPGPDGPQPHSQAPQPAQESLGEVAVRSGTCSRTNSAPDSQQHSGGAKSEAKRIRLSGFGGLGKTNHEGACPIPELNHSHNPPIAMPLHPNIPLRHFPPHQQDEQPPLPSPRLDGAPGLQPQLPTATTATAAGRGPMTLNRNSYCLGPEGVFGLMTCGSGGGVDSASLHMQQQQQQRQHNQQQQLLQQLQQLQQQQQQLYLAGYGCRTGAEVDSSCLARLSALHLATSDYQLLHRQQQQQQQQQQQQPDAQGQRDILAFANSPSSGAQFLQQQQQQQQRPTLMQPFYGLLATMSAPNNNNNNSNSSGNSNQQLLLARNSGTASGLITPAGGGGGSQPLAPRAGHHQTLLAPPSSSSLPALASTAAAAGGAIGLAGTGLGGGLSGAGGQQPQPPSSGGLELDDFLGGDLDLTAEDLMAMLGPQTSSQRCGPGSALLDSSLDAAGAHGTVFHCGDGGGGGGGRPSGPPRGAAGDRQQQQQLSVPLLPPHHLQDMQQQQQQQQPDAFDSLLAELEQRGRLHVVQPHPPLAGMLSLPLPEMGTPQQQQQPQQQPFFQDDVLGLGPLGTPYASYSAAAFTSPYHCTPGPNSLDLHSLDRQTGRQTDTDMNAHIYLLFPPQPQLRPNYPQHHTGQQGYLDPGSKQHLPQLNPTHLHQHQQLQLGPQPLGAPRRGSALGMFGTTAVAACCNESYSNGSSGLLSPRTFGAPLGLTSLNGTTPQHQHQQRPPGATGGTPRSLQTVGSGGGGGGGGCSATAAWQSGIWAPGLLRGVGSGAIATAATDSSPAATAAVGTESLTGEAAGSGAGACMTGSAGATPPPPPGSAVTAVAAGDGGGCCGSGGFSGQTGSGLLPVDLLSFLAAPAKVDVVTMGLDSGDLLDCMDCEGEALPETGSAGGGCGGNGGGGSISGCSAAEPADPLTLLMSGRGSLAQRPPPPQQQQQQVSGGRGGLVLRGAGGGAGGGGAQACGPAMKMSSSPSSSFSRSAGTIGPLLQL*