Information report for Vocar.0015s0393.1.p
Gene Details
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Functional Annotation
- Refseq: XP_002946677.1 — hypothetical protein VOLCADRAFT_116093
- TrEMBL: A0A2K3DXF9 — A0A2K3DXF9_CHLRE; Uncharacterized protein
- STRING: XP_002946677.1 — (Volvox carteri)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Musa acuminata: GSMUA_Achr10P06560_001
- Nicotiana attenuata: A4A49_29101
- Panicum virgatum: Pavir.1NG427500.1.p
- Triticum aestivum: Traes_6BL_2F2381640.1, Traes_2BL_3041037F1.1, Traes_2AL_660616C44.1, Traes_2DL_31EED5C94.1
- Zea mays: GRMZM2G170322_P02
Sequences
CDS Sequence:
- >Vocar.0015s0393.1.p|Volvox_carteri|MYB_related|Vocar.0015s0393.1.p
ATGGACACGTCTGCAGATGAAGCCATCGCTCGTGCGCTCGGTGCCGAATATTATGGAGCAGGAGACCCAGACTATGCAGCCGACGCCGCCTATATAGACGATTCAGAAGACTCAGATTATGGCGGTGGGCCTCGCAAAAGGAAACGAAAAGTTGGGGGCGGCGGTCGTGGCCGTGGGCGAGGCAGGCCGCCAGGTGGGAACCCTTTCGAAACGGCCTCATCGCCTCCCAAGCCCACACAGCTGCGCGGCGGCCACGCCCCCGCATTACTTGCCCGCTGTCTAACTCTCCAACCCGGCCTCACGGGGGCCTCTCGAGTACCTCCTCCCCCACTGCACGCCGCCCCCCTCCCCCGTACCGCCCAACTGTCAGGCTCAGGCGCAGCAGCTCGTCACGACACCCCCGTCCCCGCAGCCGCAGCCGCCGCTGGCAGCGCCGGCGACCCATCCGATGGCGACGGCGACTCCGACGACGAGGGCGACGACCGCACTAAGAGCGGCCGGCGGCGGCGCAAGGACGTGGGTAAGCAGCGCCAGGCGGGCCGCGCCTGGAGCTCGGAGGAAGAGGCCATGTTCCTGCGCGCCATGGAGCTGCACGGCCGCGATTGGAAGCGCGGGAGCGAGCTTGTGGGCACTCGCGACCACCGCGCCATCGCCTCCCACGCCCAAAAGTACTTCATCAAGCTTTGCCTGGCCGGGAAGCCGCTTCCCATGGCGGTGGCGCGCACGGGCCTGGGCTACACGCTCAGTGGCGCCATGCTGGATCCGTACTCCGCGGCGGCTAGGTCATACGGCTTCAAACCGGAGCTACTGACCCGTCTTAGCCCCGAGGAGCTTCAACAGGCACTATCCGGACTGGATCTGGATCGATTGCCGGTCATGTACGGCGGCCGGCTGCCGGACGATCAGGCGCCGCCGCCGCCGCCGCCCCGCAGCACCTCTGCAGGGGGAGTTCTGGCGGCGTCGCAGGATCCTAACCAGGCAGCGGCGGCCGCCGCCATGGCTGCGGCAGTCGCGGCGGCCGCCGCGGCCGCAGGCGGCGGTGTTCAGGGCATCACACCCGCCCAACTCGTGGCGGCCGCGGCGGCAGCGGCAGCGCAGGCGCAGCTGACAGCAGCAGGCAGTCTGGGGTTGCCGACGGCAGCGCCCGCCGCCGCCCCCATCGCTAACCCCTCCGCAGCGCCCGCATTCGGGTCTTTCACGGCACTGCTGTCCGGCGCCGCTGACGGCGGCGCCAACGCCACGTCAACGGCGCCGCTGGGCTCACTTTCGGCGGCGTTGGCGGCAGCGCCTGTGGCGGCAGCGGCCGCGGCAGCGGCAGTGTCCCCACTCATGGTCCTGCCGCCGCCACCGCCGCCGCCGGCGACCGTCCCCGCGGTAGCCGTCCGTACGGAGTACGCCCGCAACCGCCCCCGACGCGAGCTCGCAGGCCAACGCGCCCAGATGGGCCTTACGAGTGAGAGCCTCCAATTAGTGAAGCCCCAGGAGTTCATGGGGCTGCCCGGCAGCGGCGCCCCGCGCTCGCAGCCGTACACCGTCGATATGTCGACGTGGGCGTTAATGGCGATGGATTTCCACGCGCACCTGAGCTCCTACGAGGTGATCGGTCTGCTTGGCGGCACGTGGAACCCCGAAACGCGGCAGCTGGTGGTTATTGAGGCGTACGCGTGCCGCCGGGCGGAGGGCAGCGATGCGGCCACGTCGGTGGAGCTGGATCCTGAGTCGCAGGTGGAGGTGCAGTCCATGATGGAGGCTAAGGGACAGCAGTGCGTGGGCTGGTACCACTCGCACCCCGTATTCGAGCCCAGCCCCAGCCAGAAGGACATGGACAACCAGCGGAACTACCAGGCGCTGTTCAGGTGCGAGACCACCAAGCTGGAGCCCTTCATCGGGATTATCGTGGGGCCTTATGACCTGGCCCTCCCACAGCCCATTTCCATCATCACCACCTTCGTCGTACAATCGTTCAAGGGCTCATTGGTGCCGTACTCTGTACGCTGCCAGCTCCACGGCTATGAGGTGGTGCCCGACAGCCCCATGATGTCCAAGCTGCTGGCCATGTTGGACACCTTCAGGGACGACCCGGGGCGGGTGGACCTGGGGCAGCTGTGGAGGGGCTACAGCTACATCATGGCGGACGGCTCCGTGGATGCCGTACCACTGACCCGCCTCGCCAAACTGCGCCACTCTCTGAGCACCTACATGCGGGAGGCTGATCCAGCAGCAGTACGGCAAGTGCTGGATCTGTTGTGCAGTGAGCTAGCGAACCGCTGGGGGGTAAACCTTGCGACGGCGCTGGCGGCTGGCGATGGCGCCGCGACGGGGCCGGCGGCAGCGCTCGGGCTGCCGCCGCCTGACGCCAACGGCGTGGCGGCGGCGTCGGCGGCGTCAGACGGGCCACCCCCTGGAGGCTCCATGTTGGGGTTGCTGCTGGAAGATGGGGACGCGGCACCACCGCCGCCGCCACCACCGCCGCCAGCGGCAGATGTATTAGGCCTAACAGCCGGCGCCGCCGTTGTGGCGGCGGCGCCACAGCAAATCGGCACGGGCGGCTTATTCCAAGCCATGTTACAAGACGACGATGACGATGATGGTGGCCACAACAACGCGCCGCAGTTGTCACCAGCGGCGGCGGCGGCGGCGGTCGTAGCAGCGGGGCCGCTGACGGCTGCGGGGCCGGGGCAGGGCGCCACCGAACCAGGAGCCGCAGCACCACCATCACCATCAACAACATGGCCAGCAGCAGCAGGACTATCAGCAGCACTGTGCAACGACGGGACCGGTGTACGATCAAGCGGTTGGTGGTTACGGGCAGCAGCAGGGGGGTTCGCCGTTGGGCGGTTGCACCCCCCCCCCCCGACAGTCGCGATATCCGGCAGGGCCTTGCGTGGCGGCGGACCCCCTGGACCTGGCTGTGGCACTGGTTGGCCGCGTGATGAACAGATAGGAGGGGAGTGTGCTGTAGGTGTCGCAGGTGGTTGCAGATCTGCGGCGGATGGTGCGTGTGGGGGGTTGGGTGGGGTTGGGGGGATGCATCTGGTAGAGAGCAATCTGTTGGGGGCCACCATATTGTCAGGACGCTATGGGATTTTGAACGTTGGTGGTTGTGCAGTCCGTCGGCCGGTTTCAAAAAGTGGAGGGAGGGAGCTGACCGGGCGGGAAGGAGACTGCACTGCAGGTTCGGGGATCGCACGTCCGTAG
Protein Sequence:
- >Vocar.0015s0393.1.p|Volvox_carteri|MYB_related|Vocar.0015s0393.1.p
MDTSADEAIARALGAEYYGAGDPDYAADAAYIDDSEDSDYGGGPRKRKRKVGGGGRGRGRGRPPGGNPFETASSPPKPTQLRGGHAPALLARCLTLQPGLTGASRVPPPPLHAAPLPRTAQLSGSGAAARHDTPVPAAAAAAGSAGDPSDGDGDSDDEGDDRTKSGRRRRKDVGKQRQAGRAWSSEEEAMFLRAMELHGRDWKRGSELVGTRDHRAIASHAQKYFIKLCLAGKPLPMAVARTGLGYTLSGAMLDPYSAAARSYGFKPELLTRLSPEELQQALSGLDLDRLPVMYGGRLPDDQAPPPPPPRSTSAGGVLAASQDPNQAAAAAAMAAAVAAAAAAAGGGVQGITPAQLVAAAAAAAAQAQLTAAGSLGLPTAAPAAAPIANPSAAPAFGSFTALLSGAADGGANATSTAPLGSLSAALAAAPVAAAAAAAAVSPLMVLPPPPPPPATVPAVAVRTEYARNRPRRELAGQRAQMGLTSESLQLVKPQEFMGLPGSGAPRSQPYTVDMSTWALMAMDFHAHLSSYEVIGLLGGTWNPETRQLVVIEAYACRRAEGSDAATSVELDPESQVEVQSMMEAKGQQCVGWYHSHPVFEPSPSQKDMDNQRNYQALFRCETTKLEPFIGIIVGPYDLALPQPISIITTFVVQSFKGSLVPYSVRCQLHGYEVVPDSPMMSKLLAMLDTFRDDPGRVDLGQLWRGYSYIMADGSVDAVPLTRLAKLRHSLSTYMREADPAAVRQVLDLLCSELANRWGVNLATALAAGDGAATGPAAALGLPPPDANGVAAASAASDGPPPGGSMLGLLLEDGDAAPPPPPPPPPAADVLGLTAGAAVVAAAPQQIGTGGLFQAMLQDDDDDDGGHNNAPQLSPAAAAAAVVAAGPLTAAGPGQGATEPGAAAPPSPSTTWPAAAGLSAALCNDGTGVRSSGWWLRAAAGGFAVGRLHPPPPTVAISGRALRGGGPPGPGCGTGWPRDEQIGGECAVGVAGGCRSAADGACGGLGGVGGMHLVESNLLGATILSGRYGILNVGGCAVRRPVSKSGGRELTGREGDCTAGSGIARP*