Information report for Vocar.0001s1620.1.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_002956184.1 — hypothetical protein VOLCADRAFT_97174
- TrEMBL: D8UC27 — D8UC27_VOLCA; Uncharacterized protein
- STRING: XP_002956184.1 — (Volvox carteri)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Oryza sativa: OsMYB3R2-L
Sequences
CDS Sequence:
- >Vocar.0001s1620.1.p|Volvox_carteri|MYB_related|Vocar.0001s1620.1.p
ATGTATAGCGACGACGGAACGACATCATCTGATGATCCATCTCCTGCAGCTGGGAGGAAGGAGTGGTCCCGCAAGAACGAGCATCTTCTGAAGGGAACGGAGAAAAGAAGGCGTCGCAAGAGACCTGCGTGGACCCTGGAAGAGGAGAGTCTTTTGGCTGAGAAACATGCCCTGCATGGCAATGCATGGATGCTAATAGCGAAAAGCTTACCTGGCCGAACTCCTGGTGAAGTCAAGAACATCTACAACAGCACGCTTCGGGCAACTCGACAAGGCACACGTTCCCTGCTGCGTGCCTACGCTCTGGCCGTTCAGGGACGCGAACACGACGACGACGCGCGGCATTCGGCCTACAGCGCGGTCCTGGAGGCGCACGAGGAAGAAAACCGTCTGGCGGAAGCGGAGGCAGCTGCGTTAGTTGCGGCGGCCGCTGCGGCATCTGGTCATCCGCTGCTGGCCAACCCCGTGGCCGGAATGTTCCCCATGGGGATGCTACAATCCATGGGCATCCCGCTTCAAATTCAAATCCAGCCCCGCCAAAACTGGCCTCCAGGAGTACCATTTAATATTAACGACGTCCAGCCTGAGCGACTCAACCCACATGACCAACTGCGTCTGGCACTGCTACACCACCACCATAACGTGCAGCAAATGCAACTAAACCACCTGTCCAACGAACCGCTTTCTGAGCAGGAAAGAGAGGAGCAGCAGCTGCAGCTGCTGCAGCAAATGCAGCTGAGCCAGCTGCAGGGGCAGCAGCGGCAAGACGGAGAAGAAAACCCCGGGGAGCCCGGGGCCCAGCAGCAAGAACAACAACAACAACAATATCAGCAGCAGGAAGGCAGCATGATGCACATGATGCTGACGGATGTACCCCCTAATACCAGCACCCTTCCTGGCTGGGCCCCCGGGGCCCTCCAGCCACCCACGGGGGGTAATAACCCAGCGGTAAATAAAGCATCCAAGACTACAGCTGCTGCTGCTGCTGCTGCCGCGCTAGGGCAACTAGGGCTTCCTGCGATGCCGGCTGCGTTTTCGGAAACCGCAGGAGGGGGCTGCGTCAGTTTCCCCAGCGGCCCCGGTGTAAGTGCTGGTGTAGATGGCGTTTTGGGTATGGCTGGGGGCCCGCCAAGCCAGACGCCGCTTCCCGGCGATGGGGGAGTGTCTGCGCTGGACCTCTCTTCTCCAGAGCATGCAGGCCGGGGCGCGAGCCGCGAGGAGCCGATTACGGACGGAGGGCCACGCCTCCTCGCGGCCGGAGACGGTAACGCTGACCGGGATGCAGGCACCGGCGATTCATCACGGGGGGTGGCACCATCTGTTGCTGCTGCTGCAGCTGCTGCAGCAGCAGCTGCCGCGGCCGTAGCTGCTGCGCAAAGCACAGGACATGATGGCGCTCGAAGCGGGGGCGGCGGCAATGATGGCGATGGCGACATTCACACGGAGAACAAGCCTCCGTTGCTGCTGCCGCCCCCACTCCCGCCGCCACTGTCGCCACGCCAAGCCCATGCGGCCGCCGCGACCAGCCGCAAGCGGTCTTCAGCGGGACCGCCCGTGGACTCCGCGGCTGCCAGCGGCCCCGCAAGCAAACGGCCCAGGCGCCGCTATATGCCAACGGTGCGTGGCGCCCAGACGCGCCGCGAAGGCCTTTTCGAATCCGACGGCGAGGACCATGGCAGCCCGAATCCGCCATCACCCGCGCGGTCCGGCTCGCCAAGCGGCCGGCGGCCGGCGACCATGGGGACTGCGCCGCCGCCGCTGTCGCAGGCTCGACGGGCTGGGGAGGTGGGACTGGGATTGCCCTCGGAGTCCCTCCCCCGGAAAGTCCCGCCGCCGCCGCCACAACAGCAGCCGCAGCAGGACCAGGAGAGGGAGAAGGAGCCGACATCCGCCGGAGATGTCAAGCACCCGGCGCAGGAGCAGGAGGGAGAGCCTGAGGTCCAGCAGCGGATGCAGGCGCTGAAACTTCCACGGCGGTCATCACGTCAGCAGCAACAACAGCAGCAACATCATCATCAGCAACACCAACAGCTTCTACCGTTGCAGCCGAAACAGAGGCAGCTAGTCAGTGGGAAGGACGATTCGCTGATGCTGCTGTTGGCTGCGCAACCCGAATTGGATGAGGAGTCCGCGGAAGAGCTGCGGCGGCGAATAGAGAAGGAGGAGGAGAGGCTTATTGATGCCATGGCCATGACGGATATCCCGCCATCGCCCTCGCGTAACATGCAGAAGGGCCTGCAGAAGAAGGTTCTGGAGCTGCAGCGGCAGGTACAGCGGCTACAGGAAGACAAAATGCGGTTGCTGCAACACGAGGAGAAGCTGCGGCCGCCGCCGCCACCGCCGAAGCCCAGGCCCGAGCCGCCCAAGCCACAAGAGATTATCCTTCGGTCTCGCACGCAGCGTAAGAGCGCGCGGGGCGTAGCCCTTGCTACTGCAGCGGTGGCGGCGGCGGATCTGCAGGAAGATGAGGGAGGCGAGGAGGCTGTCGAGGAGGACGAGGAGGAGAAGAAGAAGCAACCAGCGCGGCCACCGCCACAGCTGCTTCTGCAGCGAACGAAAGCGGATGAGGAGCGCGGGCGGGCCGGGCGCGAGAAGCGCAAATCTGCCAAGGTCAAGCGGCGAGACGCCGAGGGGGCCGAGGAGGAGGAGGAGGAGGACGACGAGGAGGAGGAGCGGCGGGAGGAGGCGGAAGCTGCGGTCGATGACGATGGGGAGGAATGGCGAGAAGAGGACTATGGGGCGCCGCGGGAGGAAGTGCCGCCACCACCACAACCACCGCTACCGGTGGTGAATATGAGTATGTTTGGCAGGGGCCCCCTCGGACTGACGCCATCTCTCGGGCTGCCGCCGGTGGGGGATCCCGCTGCCTATGCGGGCCTTCTGGAAGGTCTGGGCCGCTCTGGGGCCCTCCCCGACCTGCCTATGGTGGTCCTGCGTCCGCCGGATGGTGGTCCGCCCGTTCTGTGCCTCGCCGTGCCCATAAGCACCCTCAGTCCGGGAGATGTACCCATGGGGGCCTTGCCCATTGGCGACTTGCCGCGCGGCAGCACCTTGCCTCCCGTGGGAACCCTGCCTCTAGGTGGCTTGCCCATCGGCAACATCGCTGCCGCAGCAGCCGCTGGCTGGCCGCCGCCGCAGCAGCCGCTTCCACCGCCGGGACTTCCGTTTGGCCCCGCCATGGCCGTGGCCGGTTTGTTTGGAAGCGGCGAGGATCGGCCACCGCAGCTGCAGCATGGACCGCACCTTGCCCGCCATGGCCCGGTGGCCGATGGAGGAGGAGGAGCGGTCACTCGCGCCCGGGCACGCGGCCCGGGGCAGGGTCAAAGCCAGGGTCAAGGCTTTGAGGCATTGGCAGCGGCCGCAGCAGCCGCCGCCGCCGCCGGCAGCTCGGGGCCTTCAAACAGCAGACGACCTGGAGACCGGCCGTCCGGCGCTGCAGCTGCTACAACTCGCGGCAACAGCGGCGGCGCTGCCACAGACCCGAGCAGCTCACAGGGTTACGGTCAGGGCCAAGGACAAGCACAAGGCCATGAGCGAGGTACGCGGGCGGCGCCTGGTTCGTCACAGGGCACCGCCGCTACTGCTAAGGGCGACAGTGCCGGAGGGCAGGGTGGTGATGGACCGCCAGGTGGGCGCTGGGCCGTGGCGGCGGCGCCGGCTAACAGCGGCGGTGGCGGAGGCAGTGCCAGGGAGGGTGGCCGGTTTGCGAAGGGAGTACCTCGCGGGGGCGGTTCTTTCACCGGCGGGAGAGACGTGGTGAGCAGCAAGGCGATGAGCAGTCCTGAACAGGCCGCCGCGATTTTGCTGGCGGCGGCAGCGGGCTCAGGCGGCGGTGGCGGTGCAGGTGCGGGAACTGGAAGATTCCGCAAGGTGCCCGGCGCTGGCGCAGGTGGCCCGTCTCGAGGACAGGCAGCACCCGGCGGCGGAGGGGGGCAGCAGTGGAGTGGGCCGCAGGGTAGCGGCCCGGCGGCGGAGGCGGATGGCAGTGAGAACGAGGAAGATCCGCAACCTGCCGCTGCGGATCGCCGTATGGCGCGGCTGCCGCCGGCGGCCGCCTCGGCTTCTAGGGAGCAGAGGAGGGGTGAGGCGTCCCGTGCGGTTCCCCCCGGTGCAGACGCCGACGGAGGCCACGTCGGCGTTGGCGAGGGTACACGTGGGCCAGGTGGCGCGCGTGGGGGGCCCGGCGGGGGCGGGGCCGCCGCAGCAGGTCGAGCCGGCGATGTTGGCGATGACGCAGGCGCGAGTAGTGACGAGGACTACAGCGACAAGAGCAACGATGTTGGTCCCGGGCCACTGCCAGGCCCCGAGGATTTCATGCGGATGTTCCCGGGGGGCTTTGGGGTTCCGCCGAGACCTCCGTTCTTGCCTGGAGGCGGTCGTGGCATGGCCCCTTTTATGGCCCCCTTCATGGGCCCAGCCTTCGACCGGGCAGCAGGCGGAAGGCCACTTGGGCCCGATGAATACGGCGTCGATGCAGCGCTTAATACGGAACGGGCGTATGCCAACCTGCTTGACGCGTTTCCTGGGGCGGCGCCACGGCGCGGCGGCGGCGGTGGCGGCGGCGGTGGCGGCAGCCTGGGAGCGGCTTCGGGTTTCGGCGGCTTGGGCCCCTCAGGTCCGGGGCGGGCAGGTGCTGGTGTTGGCGGCGCGGCGGCCGCTTCACGGCGTGTCGCTCCACCGATGCTGCCGCAGCAGATGCCGGCCCCCGCGCTGCTTGGGCTACAGATGCAGCTCTTGATGACGCAAATGGGGCAACCCGGGCTGATGCCGCCCGGGCTGGTGCCGCCAGGTGGGCCGGGTGCAAGGATGCCGCTGCAACAGCCCAGAGGCGGGGGCGGCTCTGGCGCCTCTGGTCACATGCCCGTGCCGAAGCATATGCCGATGCACATGCCCATGCCGATGCACATGCAAGATCACGGCGTCATCCCCGGCGGTGGCGGTCCCCGGGGCCGAACCGGCGCTCGGCCTTCCGGAGGGCCCCCCCAGCCGCAGCAGCCGACTGGGCGAGGCGCACGACGAGCGGGAACACGGCATTACGAAGACGACGAGGATTCAGAGTCGGATGAATAG
Protein Sequence:
- >Vocar.0001s1620.1.p|Volvox_carteri|MYB_related|Vocar.0001s1620.1.p
MYSDDGTTSSDDPSPAAGRKEWSRKNEHLLKGTEKRRRRKRPAWTLEEESLLAEKHALHGNAWMLIAKSLPGRTPGEVKNIYNSTLRATRQGTRSLLRAYALAVQGREHDDDARHSAYSAVLEAHEEENRLAEAEAAALVAAAAAASGHPLLANPVAGMFPMGMLQSMGIPLQIQIQPRQNWPPGVPFNINDVQPERLNPHDQLRLALLHHHHNVQQMQLNHLSNEPLSEQEREEQQLQLLQQMQLSQLQGQQRQDGEENPGEPGAQQQEQQQQQYQQQEGSMMHMMLTDVPPNTSTLPGWAPGALQPPTGGNNPAVNKASKTTAAAAAAAALGQLGLPAMPAAFSETAGGGCVSFPSGPGVSAGVDGVLGMAGGPPSQTPLPGDGGVSALDLSSPEHAGRGASREEPITDGGPRLLAAGDGNADRDAGTGDSSRGVAPSVAAAAAAAAAAAAAVAAAQSTGHDGARSGGGGNDGDGDIHTENKPPLLLPPPLPPPLSPRQAHAAAATSRKRSSAGPPVDSAAASGPASKRPRRRYMPTVRGAQTRREGLFESDGEDHGSPNPPSPARSGSPSGRRPATMGTAPPPLSQARRAGEVGLGLPSESLPRKVPPPPPQQQPQQDQEREKEPTSAGDVKHPAQEQEGEPEVQQRMQALKLPRRSSRQQQQQQQHHHQQHQQLLPLQPKQRQLVSGKDDSLMLLLAAQPELDEESAEELRRRIEKEEERLIDAMAMTDIPPSPSRNMQKGLQKKVLELQRQVQRLQEDKMRLLQHEEKLRPPPPPPKPRPEPPKPQEIILRSRTQRKSARGVALATAAVAAADLQEDEGGEEAVEEDEEEKKKQPARPPPQLLLQRTKADEERGRAGREKRKSAKVKRRDAEGAEEEEEEDDEEEERREEAEAAVDDDGEEWREEDYGAPREEVPPPPQPPLPVVNMSMFGRGPLGLTPSLGLPPVGDPAAYAGLLEGLGRSGALPDLPMVVLRPPDGGPPVLCLAVPISTLSPGDVPMGALPIGDLPRGSTLPPVGTLPLGGLPIGNIAAAAAAGWPPPQQPLPPPGLPFGPAMAVAGLFGSGEDRPPQLQHGPHLARHGPVADGGGGAVTRARARGPGQGQSQGQGFEALAAAAAAAAAAGSSGPSNSRRPGDRPSGAAAATTRGNSGGAATDPSSSQGYGQGQGQAQGHERGTRAAPGSSQGTAATAKGDSAGGQGGDGPPGGRWAVAAAPANSGGGGGSAREGGRFAKGVPRGGGSFTGGRDVVSSKAMSSPEQAAAILLAAAAGSGGGGGAGAGTGRFRKVPGAGAGGPSRGQAAPGGGGGQQWSGPQGSGPAAEADGSENEEDPQPAAADRRMARLPPAAASASREQRRGEASRAVPPGADADGGHVGVGEGTRGPGGARGGPGGGGAAAAGRAGDVGDDAGASSDEDYSDKSNDVGPGPLPGPEDFMRMFPGGFGVPPRPPFLPGGGRGMAPFMAPFMGPAFDRAAGGRPLGPDEYGVDAALNTERAYANLLDAFPGAAPRRGGGGGGGGGGSLGAASGFGGLGPSGPGRAGAGVGGAAAASRRVAPPMLPQQMPAPALLGLQMQLLMTQMGQPGLMPPGLVPPGGPGARMPLQQPRGGGGSGASGHMPVPKHMPMHMPMPMHMQDHGVIPGGGGPRGRTGARPSGGPPQPQQPTGRGARRAGTRHYEDDEDSESDE*