Information report for Vang08g00010.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_017408386.1 — PREDICTED: AT-rich interactive domain-containing protein 2-like
- TrEMBL: A0A0S3SZ05 — A0A0S3SZ05_PHAAN; Uncharacterized protein
- STRING: XP_007135094.1 — (Phaseolus vulgaris)
- GO:0010628 — Biological Process — positive regulation of gene expression
- GO:0016575 — Biological Process — histone deacetylation
- GO:0048235 — Biological Process — pollen sperm cell differentiation
- GO:0000118 — Cellular Component — histone deacetylase complex
- GO:0048555 — Cellular Component — generative cell nucleus
- GO:0048556 — Cellular Component — microsporocyte nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_18285
- Glycine max: Glyma.18G234900.3.p, Glyma.18G234900.2.p, Glyma.18G234900.1.p, Glyma.09G257700.6.p, Glyma.09G257700.5.p, Glyma.09G257700.4.p, Glyma.09G257700.3.p, Glyma.09G257700.1.p, Glyma.18G234900.4.p
- Manihot esculenta: Manes.01G255100.1.p
- Medicago truncatula: Medtr7g078120.3, Medtr7g078120.2, Medtr7g078120.1
- Prunus mume: XP_016650277.1
- Ziziphus jujuba: XP_015866475.1, XP_015866474.1, XP_015866473.1
Sequences
CDS Sequence:
- >Vang08g00010.1|Vigna_angularis|MYB_related|Vang08g00010.1
TTGAATTCGATGTCCATGGCAGGGCGGTTGCAGTTATACGACGGTGTTCGCGAAGAAGATAGTGGTGAAATATTTGGAGGCTCGAACGACGATTCTTTGTGCCGTTTCGAGAGGTTGTTTGCAGAGTTCTTTAGTGAGATCTGTGCATTTAATTGCGTTTTGCATTATCCTCCAATGCTGTCTGATGGGCAGGACGTGGATTTGTATAGGTTGTTTTTGGTGGTAAGAGGGAAGGGTGGATACGATGCCGTTTGCAAAGGGAAGTTGTGGGATTCGGTTGGGGAGGAGTCTGGGATGGGAGTGAGTGTTGGGTCCTCTGTTGAGTTGGTTTACAGTAGGTACTTGAGTGCTTTGGATTCATGGATGAAGAAAGTTGCTGAGAGTAAGGTGTCTCCCGAATTTGGTGTGGTGGATGATAGGGATAAGTTTGGGAGGCGGTTAATGGAGTTGCAGGCTGAGGTGGAAGGGTTGCTTTCCGGTTGTGCGGATGAGAGGGTGGTTTTGGTTGGGGAGGATGTCGAGGGTGGTCTTGATGAAGATGATCACAACTTGGATGGGAGGGAGTTATCCGGTGCTAATGGGGTGAAAAGTAACGGTGATGAAGGAGGTGAACATAGACAATGTGATGATTCGGAGATGCCGGACAATGACATGGATGAGGCGGTTCTTGGAAACTCGGATAAGGGAAATGATTTAATGGGAGGGGAGGAAGGGTTTGATGGAGGGAAAATGCCTGAAGAGCAGGCTGTGGATATATCGGATGGGGCTAACAAAAGTGGGACTGGAGTGGTGAGTGGAGGCAAGCAGTGTGACGACAGTGATGATAAGGGCTTGGTGTTGGATGCATCTGGTGGTAATAGTGATGATGATAGTTCTGGTCACAAGAGGAAGAGAGAGGGGTCTGTGTGGGATTCATCTAGTGATGATTGTGATAGTCCTAGTCGTAAGAGAATGCGAGAGTCTGCAATGGATATGCTGAGCTGGATTACTGGTGTTGCAAAAGATCCCGGTGATCCTGAAGTTGGTTCAATACCTGAAAAGTCAAAGTGGAAGTCTTACAGTAGTCAGGAGGTGTGGAAACAGGTGCTGTTGTTTCGGGAAGCTACGTTTTACAGAAGAGGTTCTGAGGCAAGCAATGAACAACGTAATTGGCAGAATCAGAAGATGCATCCGTGCTTGTATGAAGAACAAGTTGGGACAAACTACAATCTCAGAGACAGGTTGAAATGTGACAAGAAGCTTTTGTTTGGCAAATCTGCATCTTTGCGAAGCTCTTCTGATTCATCTTTGGCAACTGAGAACAGAACACCTGGTTCTCACACTGAAGGTCAATCTGAGTTGCGTGATTCTCCAGATGCAAATTCAGGTCTTGACAAATGTGCAACAGTACGCATTCCTTTGGGGACAAATCATCAAGCCGAAATACCAGAATGGACTGGTGTGACTTCTGAAAGTGATTCTAAGTGGTTAGGGACTCGAATATGGCCACAGGAAACAGTAAATACCAGACTTATTGAAAGGGACCCCATAGGAAAGGGGAGACAAGGTTCATGTGGCTGCCCAGAAGAAGGTTCTGTTGAGTGTGTAAGATTTCACATTTCAGAGAAAAGGGCTAAAGTTAAGCTGGAATTGGGCAATGCATTTTACGATTGGGACTTTGATCGGGTTGGTGAAGAAGTTAGGCTAATGTGGACGAAAGAAGAAGAGAAAAAGTTTGAGGATGTGGTTCGGTCAAACCCTCCATCACTTGAGAAATATTACTGGGACTATATTTTTAGGGCATTTCCTGATAAAAGCAGGGCAGAGTTAGTTAGCTACTACTTCAATGTCTTTATGTTGCAGCGCAGAGGATACCAGAATAGGCACACTCCCGATGACATTGATAGTGATGACAATGATGACGAAGCTGGACCATTAAGGAATGTTTTTGGACCTCAGATACAGAATTCTGGACATGAGATGCAGAGTTCGCGAGGCTCCATCTTATTAACCCCCAAAAAGACACGTAAAAAGGGAAAATAG
Protein Sequence:
- >Vang08g00010.1|Vigna_angularis|MYB_related|Vang08g00010.1
LNSMSMAGRLQLYDGVREEDSGEIFGGSNDDSLCRFERLFAEFFSEICAFNCVLHYPPMLSDGQDVDLYRLFLVVRGKGGYDAVCKGKLWDSVGEESGMGVSVGSSVELVYSRYLSALDSWMKKVAESKVSPEFGVVDDRDKFGRRLMELQAEVEGLLSGCADERVVLVGEDVEGGLDEDDHNLDGRELSGANGVKSNGDEGGEHRQCDDSEMPDNDMDEAVLGNSDKGNDLMGGEEGFDGGKMPEEQAVDISDGANKSGTGVVSGGKQCDDSDDKGLVLDASGGNSDDDSSGHKRKREGSVWDSSSDDCDSPSRKRMRESAMDMLSWITGVAKDPGDPEVGSIPEKSKWKSYSSQEVWKQVLLFREATFYRRGSEASNEQRNWQNQKMHPCLYEEQVGTNYNLRDRLKCDKKLLFGKSASLRSSSDSSLATENRTPGSHTEGQSELRDSPDANSGLDKCATVRIPLGTNHQAEIPEWTGVTSESDSKWLGTRIWPQETVNTRLIERDPIGKGRQGSCGCPEEGSVECVRFHISEKRAKVKLELGNAFYDWDFDRVGEEVRLMWTKEEEKKFEDVVRSNPPSLEKYYWDYIFRAFPDKSRAELVSYYFNVFMLQRRGYQNRHTPDDIDSDDNDDEAGPLRNVFGPQIQNSGHEMQSSRGSILLTPKKTRKKGK*