Information report for Tp57577_TGAC_v2_mRNA8161
Gene Details
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Functional Annotation
- Refseq: XP_003627173.1 — seed linoleate 9S-lipoxygenase-3
- Swissprot: P09186 — LOX3_SOYBN; Seed linoleate 9S-lipoxygenase-3
- TrEMBL: G7LI99 — G7LI99_MEDTR; Lipoxygenase
- STRING: AET01649 — (Medicago truncatula)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0055114 — Biological Process — oxidation-reduction process
- GO:0000786 — Cellular Component — nucleosome
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0016702 — Molecular Function — oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
- GO:0046872 — Molecular Function — metal ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G22400
- Beta vulgaris: BVRB_7g169930
- Capsicum annuum: T459_08160
- Cucumis melo: MELO3C004253.2
- Daucus carota: DCAR_016115
- Glycine max: GmLOX3;LOX3, GmLOX2;LOX2, GmLOX1;LOX1, Glyma.07G039900, Glyma.16G008700
- Manihot esculenta: MANES_11G019100
- Medicago truncatula: Medtr8g020970
- Oryza sativa: OsLOX1, LOX-3, OsLOX3;LOX3, L-2, OsLOX10
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA8161|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA8161
ATGACATACCTTTCAAATGACACACCAGCTCCATTAGTCTACTATAGACAAGATGAACCGAAGACTTTAAGAGGAGATGGAATAGGAGAGCGTAAAGAATGGGACAGAGTCTATGATTATGATGTTTACAATGATTTGGGTGATCCCGATAAAGGTCAAAGTTATGCTCGTCCAATTTTGGGAGGATCTAGCGGTCATCCTTATCCTCGTAGGGGAAGAACAGGCAGAAAACCAACAACAACAGATGTAATTCCATTGATAAAATCTGTATTTGACAGAAACTTCACACCAAATGAATTTGATAGCTTTGATGATGTGCTTGATCTGTATGAAGGAGGAATTAAGCTGCCTACAGATATACTTAGCCAAATTAGTCCTTTACATGTGTTATCAGAAATCTTTCGAACTGATGGTGAACAATTCCTCAAGTTTCCAACACCTAAAGTAATTCAAGTGAGCAAGTCTGCGTGGATGACTGATGAAGAGTTGGAAGAGAGATTATTGCTGGAGTTTCCTCCAAAAAGTAAGCTTGATAGTGCAGTCTATGGTGATCATACTAGCACAATAACCAAAGAGCACATACAGCTTAACTTAGAGGGTCTCACTGTTGATGAGGCTATACAAAACAAGACATTGTTCTTGCTAGAACACCATGACACAATAATTCCATATCTAAGGCTAATAAACTCAACTTCCACAAAGGCCTATGCTTCAAGAACGATTCTTTTCTTGAAAAATGATGGAACTTTAAAGCCTTTGGCCATTGAGCTAAGCCTTCCACATCCTGAAGGAGATCAATTTGGTGTAACTAGTAATGTCTACTTGCCTGCAATTGAAGGTGTTGAAAGTACTATTTGGCTACTTGCCAAGGCTTATGTTATAGTAAATGACTCATGCTATCATCAACTTGTCAGCCATTGGTTAAATACTCATGCGGTTGTTGAACCATTTGTCATAGCAACAAATAGACAACTTAGTGTGCTTCATCCTATTTATAAACTATTATATCCTCATTATCGTGATACCATGAATATAAATGCACTTGCTAGATCATCCTTAGTCAATGCAGATGGTATTATTGAAAAGACATTCTTGTGGGGAGGATATGCTATGGAGATATCTTCAAAAGTTTATAAGGATTGGGTTTTTACAGACCAAGCCCTGCCTGCTGATCTTATCAAAAGAGGAATAGCAGTAGAGGATTCAACTTCCCCTCACGGTCTTCGTATAGTGATAGAGGATTACCCTTATGCTGTTGACGGACTAGACATTTGGGACGCTATTAAGACATGGAAGTGGGGTCATGGTGACAAGAAAGGCGAGCCGTGGTGGCCTAAAATGCAAACTCGCGAAGACTTGATCCAAGTTTGCAGTATTATCATATGGACTGCTTCAGCTCTTCACGCAGCTGTTAATTTTGGACAATATCCATATGGAGGTTTCATATTAAACCGTCCAACTCTAAGTAGACGATTAATGCCTGAGAAAGGTACTACCGAGTATGATGAGCTAGCCACCAATCCTCAAAAGGCTTACTTGAGAACAATTACACCAAAGTTTCAAACTCTCATTGATCTTTCAGTCATAGAAATATTGTCAAGACATGCTTCAGATGAGTACTACCTTGGACAAAGAGACAGTGCTGAGTATTGGACTTCTGATACAAATGCCTTAGCAGCCTTCAAGAAGTTTGGAAAAACACTAACTGAAATTGAGGGACAACTCATAATAAGGAACAATAATGAGTCATTGAGAAACAGAGTTGGGCCAGTTAGACCATCTCCAATGCTTAAATGGACATCGGAAGAAGAAGACGCACTTGTTGCAGGAATCAAAAAACACGGTGCTGGAAAATGGAGGGCCATTCTTCTTGATCCTCAGTTTGCTCCTTTACTCACTTCTCGTTCCAACATCGACCTCAAGGATAAATGGCGAAATATGAATGTTTATGTGACTGCTGAAGGTGTTAGGACTCCCAAGCCCAAAGTTGCTGCTACTACTTCTTCTGATATTGTTATCAATGATTCTTGTCAAAATGAACAAGATGTTAATACCCCTCCAAGGTACAATGCCATGGTTTTTGAAGCTCTATCTACATTAAAAGATACTAATGGGTCCGATCTAAACGCCATTGCTAGTTTCATTGAGCAAAAGCATCAGGTTCCTCAAAATTTCAGACGGACACTGAGTTCGAGGATAAGAACCCTTGTGAATCAAGAGAAGCTTGAAAAGGTACAAAATTGTTACAAGATAAAAAAAGAAACCTCATTGGTGACAAAATCACCTTCATCAAAACAAAAGGCAGTAAAGCCACAACAACAATCATCAGTCGCTGATGATATGCTGAAGAAAGCAGCTGATACTGCAGCATACATAGTTGCTGAGGCTGAAAACAAATCATATCTGGCAGTTGAGGCATGCAAGGAGACTGAAAGATTCTCACGTTTGGCCGAAGAAAACGATGCAATGTTATTGTTAGCCGAAGAACTTTATAAACAATGTTTGCGCGGTGAAACTCTCAAATGGGCTTAA
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA8161|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA8161
MTYLSNDTPAPLVYYRQDEPKTLRGDGIGERKEWDRVYDYDVYNDLGDPDKGQSYARPILGGSSGHPYPRRGRTGRKPTTTDVIPLIKSVFDRNFTPNEFDSFDDVLDLYEGGIKLPTDILSQISPLHVLSEIFRTDGEQFLKFPTPKVIQVSKSAWMTDEELEERLLLEFPPKSKLDSAVYGDHTSTITKEHIQLNLEGLTVDEAIQNKTLFLLEHHDTIIPYLRLINSTSTKAYASRTILFLKNDGTLKPLAIELSLPHPEGDQFGVTSNVYLPAIEGVESTIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRQLSVLHPIYKLLYPHYRDTMNINALARSSLVNADGIIEKTFLWGGYAMEISSKVYKDWVFTDQALPADLIKRGIAVEDSTSPHGLRIVIEDYPYAVDGLDIWDAIKTWKWGHGDKKGEPWWPKMQTREDLIQVCSIIIWTASALHAAVNFGQYPYGGFILNRPTLSRRLMPEKGTTEYDELATNPQKAYLRTITPKFQTLIDLSVIEILSRHASDEYYLGQRDSAEYWTSDTNALAAFKKFGKTLTEIEGQLIIRNNNESLRNRVGPVRPSPMLKWTSEEEDALVAGIKKHGAGKWRAILLDPQFAPLLTSRSNIDLKDKWRNMNVYVTAEGVRTPKPKVAATTSSDIVINDSCQNEQDVNTPPRYNAMVFEALSTLKDTNGSDLNAIASFIEQKHQVPQNFRRTLSSRIRTLVNQEKLEKVQNCYKIKKETSLVTKSPSSKQKAVKPQQQSSVADDMLKKAADTAAYIVAEAENKSYLAVEACKETERFSRLAEENDAMLLLAEELYKQCLRGETLKWA*