Information report for Tp57577_TGAC_v2_mRNA6302
Gene Details
|
|
Functional Annotation
- Refseq: XP_013469040.1 — protein ALWAYS EARLY 3 isoform X4
- TrEMBL: A0A2K3NNN3 — A0A2K3NNN3_TRIPR; Always early 2-like protein
- STRING: AES61372 — (Medicago truncatula)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_012569977.1, XP_004495724.1, XP_004495723.1, XP_012569975.1, XP_012569974.1, XP_004495722.1
- Glycine max: Glyma.20G234500.2.p, Glyma.10G153800.9.p, Glyma.10G153800.8.p, Glyma.10G153800.7.p, Glyma.10G153800.6.p, Glyma.10G153800.12.p, Glyma.10G153800.10.p, Glyma.20G234500.5.p, Glyma.20G234500.3.p, Glyma.20G234500.1.p, Glyma.10G153800.22.p, Glyma.10G153800.21.p, Glyma.10G153800.20.p
- Medicago truncatula: Medtr1g083040.6, Medtr1g083040.1, Medtr1g083040.4, Medtr1g083040.2, Medtr1g083040.3, Medtr1g083040.5
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA6302|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA6302
ATGGCACCGACAAGGAAATCTAGAAGTGTGAATAAGCGGTTTGCAAACGACGTTTCTCCTGAGAAAGATGGAGTTAGTTCAAATAAAAACAAACAACGGAAGAAGAAATTGTCTGATAAATTGGGATCTCAGTGGAGCAAGGGGGAGCTACAGCGATTCTATGAGGCATACAGAAAGTATGGGAAAGATTGGAAGAAGGTTGCTGCTGCTGTACGTAACAGATCTATTGAAATGGTTGAAGCTCTTTACAATATGAATCGGGCATACCTATCTCTACCAGAGGGCACGGCTTCTGTTGTAGGTCTCATTGCAATGATGACAGATCATTATAATGTCCTGGAAGAGAGTGAAAGTGAAAGGGAGAGCAATGATGCACCAGGATCTCGAAAACCTGTGAAACGAAAGCGTGAAAAAGTTCAGCCTAGTGTCTCAAAGGATCCTGTCCAGTCTCAGTCTGTAACTTCCGGTGATGGTTGCCTCTCTCTACTGAAGAAAAGACGCATTGATGGTATCCAGCCTCGTGCTGTTGGGAAAAGGACACCCCGAGTCCCAGTTTACCACTCTTACAAGAAAGATGAAAGGGAGAATTATGTTTCTCCTAATAAAAGAAGCTTGAAGTCCACTGGTGATGCTAATGATGATGAAGTTGCAGATGTAGCTTTGGCATTATCCAGGGCTGCACAAAGAGGAGACTCTCCCCTTATTTCACAAACACCACATAGGAGAGCAGAGCAGAAGTCCTCTCCTGCTCAGAGCTTGGAAAGAATGCACCAAATGTCAGAGAAGGCTCGTGCCAAGTTTCGCAATGTTGTGGATGGAGAGTTTTTGGAAGGTAGTCTAGAAAGCAGGGGAGCTGAAAATGGAGAATATGTTAGAGATACTAGTTCGTTGATGGACATGGAAGGAGTGAGCAACACTAGAGTTCTTCTGAAGGGAGGAAAATTTTACAGAAAGAAAGAGAGAGTGGAAAATGTTGGAAATTACCAACTTGATGATGGAGGAGAAGCATGCAGCGGCACTGAAGAAGGACTTAGTTTTAGTTCTTTGAAGGAAAAGAATATGGAGGTTACCAATGAAAAGCTCGAGCAATTCTCTCCAAGAAGTCAGCGGAAAAGAAGCAAAAAACTTTTCTGTGCAGATGAAATCAATGCCTTGAATGCTTTGGAAACCTTAGCCGATCTATCTCTAATGATGCCGACATCTAATGGAGAATCTGAATCATCTATCCAGTTGAAGGGAGACAGAATGAATGTTGATAAAGATGATAAGTCTGCTTTACCTGAAGCAACATCAACAAGTCATAAGAGAAATAAAGTTAAACCTCGCGCTGTCCCTGGAGCTGACACTTCAACGTCCAAAAAATCTAAACTCGGAAAGGATATATCAAATGATACCAATGCTGTCTCTGAATCAAAAGACCAGATTCCATTTGCTGATAGAACATGGAAAAGAAAGCCGAAATCCATGAAAGCTGTAGATGATGAGAACAAAACGGTGATTAAAGGAAAACACCCTGATCAGGTTTTTGCATCACCGAAACAATCAAAGATGGTCAAACCACCAGAGGTGTTCCTACGTGTTGATCAGAAGGGTTTAGCAGTTTCATCAACTGCTGAAATTCCACTTTTGAGTGAAGTTAGTTCGCAAACTAAACAAAGAAGTAGACGCAAGATGATTTTTCAGAGACCATCCATGCCTAAAGAGAAGTCTTCTGAGAATGTATTGAAAAGCCAATCTAATAAGTACTCTACCCAAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTTATTTGGTTCGCAGATGGTTTACTTTTGAATGGTTTTATAGTGCACTTGATTATCCATGGTTTGCCAAAAGAGAATTTGTGGAGTACTTAAACCATGTTGGACTAGGGAATATCCCAAGGCTAACTCGTGTTGAGTGGAGTGTCATAAAAAGTTCTCTTGGCAAACCACGGAGGTTCTCTGAACACTTTTTACATGAGGAAAGACAAAAACTTGAACAGTACCGAGACTCAGTGAGGAAACATTATTCTGAGCTGCGGGCTGGTATAAGAGATGGACTTCCGACAGATTTGGCGAGACCATTATGTGTTGGACAACGAGTAATTGCCATTCACCCCAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACAGTTGACCATGACAAGTGTAGGATTCAGTTTGACCGTCCTGAGTTAGGAGTTGAATTCATCATGGACATTGATTGCATGCCTTCGAATCCATTCGATAATATGCCAGAAGCTTTGAGGAGGCAGATTGGTGCCAGAAAAGCCTCTTTTATGACTACAGAACCACAGCTTAATGGAAATTCAAGTTTTGGGGGATGTGAAATGCACTCATCGCCTGTGAAGGGGGATGCCAACCATGTCACTTCCCAGGCCAATATTGATAACCTCTGTGCACTAGCTGCTTGTGCTCAACCGTGTAAAGTGATGCAACATCAAGCTAAAGAAGCTGATATACATGCACTTTCTGAACTAAAGCGTGCTCTTGATAAAAAGGAGACAGCATTAACAGAGCTCCGTAATGCAAATAGTGGCATATTGGAAAACCAAAATGGCATAGAATGTTTAAAAGATTCCGAAGGTTTCAAGAAGCATTATGCCACGGTTTCTGATACTATGCTTCAATTGAGGCAGCGTAATACCTACACAGACAACTCTCTGCCACCATGGATGAAGCCCAGAGCAAAGTTCGAAGTACATGATGACCTTCCTAGTGTGTTGGATAGTTCTATGTCACAAGAGTCTAGGTCAACCGTCATTGAAATCATTAAAGGATCCAGGCTACGGGCACATGCAATGCTGGATGCTGCATTTCAGGCATGGTCTCAAGCTACAAAGGAAGGTAAAGATGCTATTACAAAGATTGGGCAGGCATTGGATTCTATCGATTATCAGCAGTTGTCCTCCAAGTACAGGTTGCCTGTGATAAGGTCGCAAGATCAAGTGAATGGCAGTTTTTACCATCATAATCAGTCGACTTGCAGAGCATCAGAGCCTTTACTTAATGATGCATCTGGTCCAAAACTGCATAAAGATTCCGAACAAGTTGATATCGAAATACCATCGGAGCTCATCGCTTCATGTGTTGCGACATTAACTATGATACAGAGTTGTACTGAACGGCAATATCCTCCAGCAGATGTGGCTCGGATATTAGATTCTGCTGTTACCAGCCTGCAACCGTGTGATCCTCGAAACCTTCCTATTTACAGAGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCTTCTTAG
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA6302|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA6302
MAPTRKSRSVNKRFANDVSPEKDGVSSNKNKQRKKKLSDKLGSQWSKGELQRFYEAYRKYGKDWKKVAAAVRNRSIEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESESERESNDAPGSRKPVKRKREKVQPSVSKDPVQSQSVTSGDGCLSLLKKRRIDGIQPRAVGKRTPRVPVYHSYKKDERENYVSPNKRSLKSTGDANDDEVADVALALSRAAQRGDSPLISQTPHRRAEQKSSPAQSLERMHQMSEKARAKFRNVVDGEFLEGSLESRGAENGEYVRDTSSLMDMEGVSNTRVLLKGGKFYRKKERVENVGNYQLDDGGEACSGTEEGLSFSSLKEKNMEVTNEKLEQFSPRSQRKRSKKLFCADEINALNALETLADLSLMMPTSNGESESSIQLKGDRMNVDKDDKSALPEATSTSHKRNKVKPRAVPGADTSTSKKSKLGKDISNDTNAVSESKDQIPFADRTWKRKPKSMKAVDDENKTVIKGKHPDQVFASPKQSKMVKPPEVFLRVDQKGLAVSSTAEIPLLSEVSSQTKQRSRRKMIFQRPSMPKEKSSENVLKSQSNKYSTQKEKLSSCLSSYLVRRWFTFEWFYSALDYPWFAKREFVEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLHEERQKLEQYRDSVRKHYSELRAGIRDGLPTDLARPLCVGQRVIAIHPKTREIHDGSVLTVDHDKCRIQFDRPELGVEFIMDIDCMPSNPFDNMPEALRRQIGARKASFMTTEPQLNGNSSFGGCEMHSSPVKGDANHVTSQANIDNLCALAACAQPCKVMQHQAKEADIHALSELKRALDKKETALTELRNANSGILENQNGIECLKDSEGFKKHYATVSDTMLQLRQRNTYTDNSLPPWMKPRAKFEVHDDLPSVLDSSMSQESRSTVIEIIKGSRLRAHAMLDAAFQAWSQATKEGKDAITKIGQALDSIDYQQLSSKYRLPVIRSQDQVNGSFYHHNQSTCRASEPLLNDASGPKLHKDSEQVDIEIPSELIASCVATLTMIQSCTERQYPPADVARILDSAVTSLQPCDPRNLPIYREIQMCMGRIKTQILALIPS*