Information report for Tp57577_TGAC_v2_mRNA35450
Gene Details
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Functional Annotation
- Refseq: XP_003597364.2 — telomere repeat-binding protein 5 isoform X1
- Refseq: XP_024632533.1 — telomere repeat-binding protein 5 isoform X1
- Refseq: XP_024632534.1 — telomere repeat-binding protein 5 isoform X1
- Swissprot: Q6R0E3 — TRP5_ARATH; Telomere repeat-binding protein 5
- TrEMBL: A0A2Z6M5Q8 — A0A2Z6M5Q8_TRISU; Uncharacterized protein
- STRING: AES67615 — (Medicago truncatula)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_13525, C.cajan_21169
- Citrus sinensis: orange1.1g042386m
- Glycine max: Glyma.15G037300.2.p, Glyma.15G037300.1.p, Glyma.13G337100.2.p, Glyma.13G337100.1.p, Glyma.11G138700.5.p, Glyma.11G138700.4.p, Glyma.11G138700.3.p, Glyma.11G138700.7.p, Glyma.11G138700.6.p, Glyma.11G138700.1.p, Glyma.11G138700.2.p, Glyma.12G062300.1.p, Glyma.12G062300.2.p
- Medicago truncatula: Medtr2g097290.5, Medtr2g097290.4, Medtr2g097290.2, Medtr2g097290.1
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA35450|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA35450
ATGGTGGCGCAGAACAGAATAAATTATGGATTTAATGGCTATCAGGTGCCAAAAAAGCCTCGTGCCGCACGATCACCTAGGAAGAGGGATACATTACAAAGAAGTGTGGAAAACGATCGAATGTGCGCGATTGACTTATTGGCCACCGTAGCTGCCGGCACTTTATTGCAAGAGAAACAGAATCCAATCATACCTAGTGATGGATCACCGAAAAAAGATCAGCATGGATTTGTTAAAGAAGAAGATGAAGATGCAAATACACCATTCAAAGCCGAGCTTCCTAATGAAGCAAGTTGTGACAAAAGGCTTCAACATGGATTTGTTAAGGAAGCATGTGCGGATGCAAATAAGCCATTGAAAGCCGAGCTCTCTGATGATGGAAGTAGTGAGAAAAAATGTTTCTATACTCTTTCTTCACAGGTGTACGATCCAAATTTCTGTTCGAAGGAAAATCTGCATCATCCTGAAATCGATGGTCAATCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCGGAGAGGTTTGTTACTGACAATATGGTCGATAGAAAAAGCCATAGTGAAATGAAAAATATTACTAGCAAAGTTGAATTAGGATCTTCTGGATATCCAGATTGTAATGATTGCAACTTAGATGTTCATGTAAGTATAGTAAAGGACGAGGTCCAAAATTCCGAGAAGGTGCCAATCGGTACTTCGGTTGGAATGTGCTGTTTTGAGGATCCCGTGGATGAAAAACCTCAAGTGCCAGTCAATTTAGGTGGCAATGCCAAGTTGTCTGGTTATGAAGATAGCACGCCTCATAACTCTTTGTTCAAAGGTTGCGACAATGTAACAGTAGTTGGTAGAGATGATGACGAAAACTTTTCAGGGTGCTCTCACCCTAGTTCAAAAACAAAGACCTTTAGGTCAAAGACTTGTATAGGTGACCAAAGAATAAGGAAAAGATTGGCTTCTAAATATCGGAAAGTTGCTCGAGAATCAAAGCACGATACACTTTCTAACAATGTAGTGGATAGAAATTTCAACACAGTTTACAGCAATAGGAAGAACAGTTATAAACGCCAACTATCTCAAATGAATATTCCTTTCAAGAAGAGGAAGATTTTTGACTGCAGCTCCACTTCAAATTCTAATGGATATATAAGAAATGACAACACTTATTATTCAACCAAGAATGATATGAATCAAGGCGTTTCTTGTTCATCTGCTCGGATACGCAAAGATCCTGGAATGTCATCCTTGGAAGGATATCATCGTTCAGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCAGAGCTTTTTATTGAGATTCCAGAAACTGCAACCGTCGCGTCCTTGAAGAAAGCAGTGATGGAAGCGGTGACTACTCTACTTCGAGGTGGATTGCGTGTTGGCATGATTCTCAATGGAAAGAAACTTAGAGATGACAGTAAAACTTTACTTCAGACAGGAATTTCTCATGATAATGCGCTGGATGCTTTGGGCTTCACCTTGGAGCCTAATTCTTCTCAAAGCCTACCACTCACATGCGCTAAAGATTCTCTTCATGTTCCGAGTGCGGACATGCCTCTATCTTTAATAGGGCAACCTTCCAGTCCAGCTGTAGTTCGTCCGATTCAGAGGATTCAAGGTTTCTGCGACACCGAGCATCAAGTAACCAGTTTAAGTAACATTGTTGAAAGTGAACACGATTCAGCACCTTCTCCTATAAGCACAATAGGTGAAAAAAGATTGACAGATTCCAAAGAACTTGTTACTATTCCTGAAATGGATACGGAGGGACTAGCTGTGCTACCAGTAGAGCAGAAGCCAAAGCGAACTGAGATGTCACAACGTCGCCGAATTCGTAGGCCTTTTTCTGTTGCCGAAGTGGAAGCACTTGTTGAAGCAGTTGAGAGACTCGGAACTGGAAGGTGGCGTGATGTGAAACTTCGTGCTTTCGATGATGCAAAGCATAGGACATATGTGGATTTGAAGGATAAATGGAAAACATTGGTACACACGGCAAGAATATCTCCTCAACAAAGAAGAGGAGAGCCTGTACCCCAAGAACTTTTGGATAGGGTCCTTACTGCTCATGCATATTGGTCCCAACAGCAACAAACTAAGCAACATCAACTCAAGCATCACCCTGAAACTTGCCTTCTACTTTAA
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA35450|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA35450
MVAQNRINYGFNGYQVPKKPRAARSPRKRDTLQRSVENDRMCAIDLLATVAAGTLLQEKQNPIIPSDGSPKKDQHGFVKEEDEDANTPFKAELPNEASCDKRLQHGFVKEACADANKPLKAELSDDGSSEKKCFYTLSSQVYDPNFCSKENLHHPEIDGQSCIASIVTSSSCSERFVTDNMVDRKSHSEMKNITSKVELGSSGYPDCNDCNLDVHVSIVKDEVQNSEKVPIGTSVGMCCFEDPVDEKPQVPVNLGGNAKLSGYEDSTPHNSLFKGCDNVTVVGRDDDENFSGCSHPSSKTKTFRSKTCIGDQRIRKRLASKYRKVARESKHDTLSNNVVDRNFNTVYSNRKNSYKRQLSQMNIPFKKRKIFDCSSTSNSNGYIRNDNTYYSTKNDMNQGVSCSSARIRKDPGMSSLEGYHRSALRSRDSHVKLRIKSFRVPELFIEIPETATVASLKKAVMEAVTTLLRGGLRVGMILNGKKLRDDSKTLLQTGISHDNALDALGFTLEPNSSQSLPLTCAKDSLHVPSADMPLSLIGQPSSPAVVRPIQRIQGFCDTEHQVTSLSNIVESEHDSAPSPISTIGEKRLTDSKELVTIPEMDTEGLAVLPVEQKPKRTEMSQRRRIRRPFSVAEVEALVEAVERLGTGRWRDVKLRAFDDAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQQTKQHQLKHHPETCLLL*