Information report for Tp57577_TGAC_v2_mRNA2303
Gene Details
|
|
Functional Annotation
- Refseq: XP_024629483.1 — transcription factor TFIIIB component B’’ isoform X3
- TrEMBL: A0A2Z6LP53 — A0A2Z6LP53_TRISU; Uncharacterized protein (Fragment)
- STRING: AET04580 — (Medicago truncatula)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cicer arietinum: XP_004504018.1, XP_012572231.1
- Glycine max: Glyma.11G010900.1.p, Glyma.11G010900.2.p, Glyma.01G228200.1.p, Glyma.01G228200.3.p, Glyma.01G228200.2.p, Glyma.20G185200.1.p
- Lotus japonicus: Lj6g3v0933490.2
- Medicago truncatula: Medtr8g091830.2, Medtr8g091830.1, Medtr4g067250.1
- Nicotiana tabacum: XP_016491354.1, XP_016491353.1, XP_016491352.1
- Ricinus communis: 30131.m007077
- Vitis vinifera: GSVIVT01023816001
Sequences
CDS Sequence:
- >Tp57577_TGAC_v2_mRNA2303|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA2303
ATGGATGATTTTTTTGATGATATTGATACTATTGTTCCTACTACACGTGCTAAAACAGGTTCAAGGTTTGCACCGAAGGCGAAACCAAAACCGAAACAATCAATTCAAAAGAATGTATCTGCATCATCAGAAAATGCAGTTTCTTCTAAAGATGGGAACAATGTGCTTGTTGACTCATCAACCACTCTCAAAGAATCTGAAGGAATTTCTCAGAATGAATCTCATATTGTAGTTGCTGTAAGTTCCTCAATTGAAGAACCTATAAGGTCTGATCATAATCCTGATGTCAATAACGTAACAGCAAAACCAGTTCAGCCTGCTAATGCTGTAGAGAGTGTATTGAATAGTGTGGCTGCTCCATCTACTAATTGCCCAACCATAGGTAAGAACAAAGAGCTGTCTGTAAATGGAGAAGGTTCATTTCTTGATATCAACAAGAGTTTGGAAGTTAGCCTAAACGAGGGTCCATTTCTTGATAGCAACATCCATTCAAATTTTGAGTCTGGAGAACTGCCTCAGGTCTTGTGTTCGGAATTTGAGTTTGATCCTTTCAGCAATGTCCTCCCTGATCCTGGCACTAGGAATGCCAAAAAGTTTCAACCCAAGATTAAGCCACGGCCTAGAGTCAGCAATACACCAGCTACTGCTTCTGCTTCATCTGGTATGCCATTCTCTGAAGACAATACAAGCTTGGAAACAGTTATTCCTTCTCATCCAGATTCCCTGAATGCTATGACATCAGAGACTATAGTTCATGATGGAACTAGAGATTTGCCTTCTAGCTTTGGAAAATCAGCTGCAGAGACTGCAGATATTTTTTCCGGGCTAGAATCACTTGATGACATTCTCAACCAAGCTGCAACTGGTACAGGAAAACCAGATCTTAAATCTTTCAATGGGAAGGGTGCAGAGGAAGATTTTGTCCTTCCGGGATATAGTAGGACAGAAACACAGGAAGGCACTGACTTGAATGCCGACTGCCCAATTGACAATGTCTATGATTATCAATCCATGAAATCTGGCACAGATCCAACATCTGAAATTCCAAGGCATGAAGTGTTGACAAATTCTGCAGATAGTCCCACATTGGCGGACCTTATGCAGCAAGACGGTACTGGGGAGAAAGAAGATGCTAACAAGAGGAAAAAATCTGGAAAGAAGAATAAAAGATCCTCTATTGCTGGTGTGGAAGATAAAGGTGGTAAAACCTCAAGGAAGCCGAGAAAACAATCGGTTCGTAAACCTGCTAAAAACTCATTGAATGAGCCTATTGAGGACAATGATGATGTCCTCGACCCTCCTTATGAGTTTGATGGAGATGAACTTGAAGAAAATGACGATGAGAACGAAGTGGATAATTCATCCAAGAAAAAAAGAGCATCAACAAGTTCAAAGAAGAAATCTGTGGCTAAAAATGGAAAAACATCTGGAAAACGCAAGAAGGCTAATGATGATTTAGACAAGGTTACTGAAAAACCTCCTAAAAAGTTCCCACATTCATCTCGGCGAAAAAAAAGATGTGTGGACAAGGCTTTGCTGGATGATGAATATCTTGATCAACGAACATTACCTCTTAGAGATATTATTTTACTTGCAGAACATAAAGAGCGATTGGCGAAAAAGGAGGGAACAACTACTAATACATCTTCCGCCAATCAAAGTGATGGGGATTTTCTTCATGAGACTGATGTTAATAATGAAGAGGAGTTTTATGGGTCAGATGATGGTTATAGAGACCCATATGATGGTTATAAAGACCCATATGATGGTCAATATCAAGCCAGTGAAAATATTACATCAACTGCTCCTTTATTGAATTACCAGTCATTCATGGAGAAGACACCTAGGGGAAAATGGTCAACAGGAGATACTGAAAAGTTTTACGAGGCTATTAGGCAGTTTGGCACAGATTTTACTATGATACAACAGCTTTTCCCTGATAAAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAGCGGCAACATCCTTTACTGTTATCTGATGCTGTGAATAATCCTACAAAAGATCTTTCTTTATTTAAATTGGTGATTGAGAGACAGATTCAAAAGTCTAAGGAAGAACAAGATGCTGCTGGAGATGCCTCAGATTTAATGCCTGGGGAGGAGGTTGAGGAGCCGACGACACCTGGAACTAATGAAGAGGTTGCAAAACCTCAGCAGGAGCAGGACCACATCAATGTTAAAGATCAGGAAGATTCTATGCCAGTTCCAGGGCAATCTGATGATGACGATGATGATGACGACGATGGTGAAGATCCATTACTAAAATGGTCTCAGTATCAAAGTTCTATTTAG
Protein Sequence:
- >Tp57577_TGAC_v2_mRNA2303|Trifolium_pratense|MYB_related|Tp57577_TGAC_v2_mRNA2303
MDDFFDDIDTIVPTTRAKTGSRFAPKAKPKPKQSIQKNVSASSENAVSSKDGNNVLVDSSTTLKESEGISQNESHIVVAVSSSIEEPIRSDHNPDVNNVTAKPVQPANAVESVLNSVAAPSTNCPTIGKNKELSVNGEGSFLDINKSLEVSLNEGPFLDSNIHSNFESGELPQVLCSEFEFDPFSNVLPDPGTRNAKKFQPKIKPRPRVSNTPATASASSGMPFSEDNTSLETVIPSHPDSLNAMTSETIVHDGTRDLPSSFGKSAAETADIFSGLESLDDILNQAATGTGKPDLKSFNGKGAEEDFVLPGYSRTETQEGTDLNADCPIDNVYDYQSMKSGTDPTSEIPRHEVLTNSADSPTLADLMQQDGTGEKEDANKRKKSGKKNKRSSIAGVEDKGGKTSRKPRKQSVRKPAKNSLNEPIEDNDDVLDPPYEFDGDELEENDDENEVDNSSKKKRASTSSKKKSVAKNGKTSGKRKKANDDLDKVTEKPPKKFPHSSRRKKRCVDKALLDDEYLDQRTLPLRDIILLAEHKERLAKKEGTTTNTSSANQSDGDFLHETDVNNEEEFYGSDDGYRDPYDGYKDPYDGQYQASENITSTAPLLNYQSFMEKTPRGKWSTGDTEKFYEAIRQFGTDFTMIQQLFPDKTRHQIKLKYKKEERQHPLLLSDAVNNPTKDLSLFKLVIERQIQKSKEEQDAAGDASDLMPGEEVEEPTTPGTNEEVAKPQQEQDHINVKDQEDSMPVPGQSDDDDDDDDDGEDPLLKWSQYQSSI*