Information report for Thhalv10019941m
Gene Details
|
|
Functional Annotation
- Refseq: XP_006406270.1 — protein ALWAYS EARLY 3
- Swissprot: Q6A332 — ALY3_ARATH; Protein ALWAYS EARLY 3
- TrEMBL: V4M5Z5 — V4M5Z5_EUTSA; Uncharacterized protein
- STRING: XP_006406270.1 — (Eutrema salsugineum)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G21430, AT3G21430.2
- Brassica napus: GSBRNA2T00066305001, GSBRNA2T00079986001
- Brassica oleracea: XP_013586570.1, XP_013586569.1
- Brassica rapa: XP_009145478.1
- Gossypium arboreum: Cotton_A_04877_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A02G0465, Gh_D02G0520
- Raphanus raphanistrum: RrC548_p3
Sequences
CDS Sequence:
- >Thhalv10019941m|Eutrema_salsugineum|MYB_related|Thhalv10019941m
ATGGCGCCTTCAAGATCAAAGAAATCTAAATACAAGAAAACTTCCCGTGGTAAAGCTGTTTCTCCTCGCAAAGACGAAGAAAGTATGAGCAAAGCCAAACAACGAAAGAGGAAGCTGTCGGATATGTTAGGTCCTCAGTGGAGCAAGGAAGAGTTAGAGCGCTTTTATGAAGGATACCGCAAATTCGGAAAAGAATGGAAAAAGGTGGCTGCATTTGTACATAGCCGTTCTGCAGATATGGTAGAGGCTCTATACACTATGAATAAGGCTTACTTGTCTCTTCCAGAAGGCACTGCATCTGTGGTTGGCCTAAATGCGATGATGACTGATCACTACTCTGTTCTGCATGGAGGAAGTGACAGTGAGCAGGAAAGAAATGAAGGTATTAAAACTCTGAGGTCAGCCCCTAAGCGCTCTAGAGTGAAATCCTCAGATCATCCCTCTATAGGATTAGAGGGTCTGTCTGACCGCTTGCAGTTCAGGTCCTCTTCAGGCTACTTGCCATCACTGAAGAAGAGACGTACTGAGACTGTGCCTCGTGCTGTTGGGAAAAGGACTCCTAGAATTCCTATCTCATATACCCCTGAGAAGGATACTAGGGAAAGATATTTATCACCTGTTAAGAGGTGTCATAATCAGAAGGGGGATGATACTGATGATGATATGGAACATGAGATTGCATTAGCATTGACTGAGGCTTCACAACGAGGTGGTTCTACCAAAAACTCCCACACACCAAATAGAAAAGCAAAGATCTACCCCCCTGATAAGCAGGGTGAAAGAATGCGTGCCGATATCGACATGGCCATTGCCAAGCTTCGTGCCACTGAGATGGAAGATGCCCGCTGTGAACCAAGCTTGGGAAGCACTGAAGCTGATAATTCAGGAGGTAGAAATGAGATGACGCCTGGAGAAGGTTCTAGTGCCATGGATAAAGGAAAAAAATACTATAGGAGGAGACTAGGCATTAAAGAAGATGATGTAAAAGAAGCCGGCAGTGGTACAGATGAAGCACAAAGCTTAGGCACCCTCGATGAGAAATTTGAACCAGAAGTGGATGGGAAGCCTTTAAAATTCACATATAGAAGTTCAAGGAGAAAAAGTAAAAAAAGTCTCTTTACAGCAGATGAAGACGCGGCATGTGATGCTCTCCAGACGCTGGCAGATCTATCGCTGATGATGCCTGAAACTGCCACGGACACTGAGTCATCTGTTCAAGCTGAGGAAAAGAGAGCTGGAAAAGCGTATGTATCAGATTATAAAGGGACTGATGCAGCAGCCATATCTAAAAGGGGTTCCCTTCGAAACCCCAAACAGAGGAGATCCGTCAGCAATGATATTTGTGATAATGAAGCCGAGAGAAAGAGTCCAAGTAGCTCTGTAATCCGAAAGGGACGGCTGAAGACATCACCAGCTAAAGTTCCTAAAGATGAGCTTGCTGCAATTTCAGAAGTCATTGAGCCTCCTAAAAACAAGGGAATAGGTGAGGGAAATAAGCCTGTTGGGAGAGGTAAACGGTCCACAAGTACTCGAAACACACACGAAAAGAAGTCTCTCAAACCCCCGGATCATACTTCTTCAAGTAACAACATAGTAGAAGAAGATGAGTCAGCTCCACCAACTACAGTCACAAAGAAACAAGTTAACTTGACAACTAAAGTTAGGAGCAGAAGAAAGATAGTAACTGAGAAACCTCTAACTATTGATGACGTGAAGAGTTCTGAGATTCTGGAGAAGTTTTCGCATTGCATATCTAGTTTCCGAGCACGAAGATGGTGTTTTTTTGAGTGGTTTTACAGTGCAATTGACTACCCATGGTTTGCCAGACAAGAGTTTGTTGAGTACTTGGATCATGTAGGGTTGGGTCATGTTCCTAGGTTAACTCGCGTTGAATGGGGTGTCATAAGGAGTTCTCTTGGGAAACCGAGGCGTTTTTCTGCACAGTTTCTGAAGGAGGAAAAAGAAAAGCTATACCTATACAGGGATTCTGTACGAAAACATTATGATGAACTAAACACGGGCACGAGGGAAGGACTTCCGATGGATCTGGCTCGGCCTCTAAATGTTTCACAGAGAGTCATTTCCGTGCATCCAATGTCCAGAGAGTCTCATGACGGCAGTGTCCTAACTGTTGATCACTGTAGGTACCGGATTCAATTTGACCACCCTGAACTAGGGGTGGAATTTGTTAAGGATACCGAATGCATGCCACTGAATCCTTTAGAAAACATGCCAGCATCACTTGCAAGGCACTATGCTCTCTCGACTTATGACATTCAGAATCCCAGTGAGGAGAAAATGCACGACCGGGTACAGGAAAACATGCCGGAAGGATACCTAAAACTTTCGTGCGACACAGGCCATCCCTTAAACTCGCCAATCTATAACGTTAGCAATTCACTAAAGGAGGAAAAGGTAGATATCTCAAGTTCGGATCCACAAGCTCAACATGTAGTGGATGGGGCCCTTGATTTACAAATGTATAATTCTCAGCCTTCAAGTATTGGACATATCCATGCAAGAGAAGCTGATGTCCAAGCTCTTTCTGAACTAACACGTGCGCTTGACAAGAAGGAGCTAGTTTTGAGGGAGCTAAAGTGCATGAACAATGAGGTTGTGGAAAGTCAAAAAGATGGACATCATGCCCTAAAGGATTCTGAATCTTTTAAGAAACAATATGCAGCTGTTCTCTTTCAGCTAAGCGAAATCAATGAGCAGGTTTCATTAGCACTTCTTGGCTTGAGGCAACGGAATACTTACCAGGAAAATGTACCATATACTTCAATAAGACGCATGAGCAAATCAGGGGAACCTGATGGTCAGTTGACGGACTTAGACAATAATGCATCTGATACTAATGGGTTCCATGTGTCTGAGATTGTTGACAGTTCCAGAATAAAAGCACGGAAAATGGTGTACAGGGCTGTACAGGCATTGGCGTTACTAAGGAAAGATGAAAACAATGGTGTAAATATTGAAGAAGCCATTGATTTTGTTAATAATCAGCTTTCAGTAGATCAAACAGAAGGGTCATCAGTCCAGCAAACGCAAGCTGCTCAGGATCAGCGTCTTCCCTCTACACCAAATCCGCCTAGCTCAACTCATGCCGATACATCCGACGCAAACCCACCAGAACAAAAGGAGCTGCAAATTCCGTCTGAACTTGTTTCACGCTGTATGGCTACATTGCTCATGATTCAGAGATGTACAGAGAGGCAATTCCCACCAAGTGAAGTGGCCCAGGTTCTAGACTCGGCAGTGGCCAGTTTACAGCCTTGCTGCTCCCAGAACCTTCCTATTTATACAGAGATTCAGAAGTGCATGGGAATCATCAGAAACCAGATTTTAGCCCTCGTACCCTCCTAA
Protein Sequence:
- >Thhalv10019941m|Eutrema_salsugineum|MYB_related|Thhalv10019941m
MAPSRSKKSKYKKTSRGKAVSPRKDEESMSKAKQRKRKLSDMLGPQWSKEELERFYEGYRKFGKEWKKVAAFVHSRSADMVEALYTMNKAYLSLPEGTASVVGLNAMMTDHYSVLHGGSDSEQERNEGIKTLRSAPKRSRVKSSDHPSIGLEGLSDRLQFRSSSGYLPSLKKRRTETVPRAVGKRTPRIPISYTPEKDTRERYLSPVKRCHNQKGDDTDDDMEHEIALALTEASQRGGSTKNSHTPNRKAKIYPPDKQGERMRADIDMAIAKLRATEMEDARCEPSLGSTEADNSGGRNEMTPGEGSSAMDKGKKYYRRRLGIKEDDVKEAGSGTDEAQSLGTLDEKFEPEVDGKPLKFTYRSSRRKSKKSLFTADEDAACDALQTLADLSLMMPETATDTESSVQAEEKRAGKAYVSDYKGTDAAAISKRGSLRNPKQRRSVSNDICDNEAERKSPSSSVIRKGRLKTSPAKVPKDELAAISEVIEPPKNKGIGEGNKPVGRGKRSTSTRNTHEKKSLKPPDHTSSSNNIVEEDESAPPTTVTKKQVNLTTKVRSRRKIVTEKPLTIDDVKSSEILEKFSHCISSFRARRWCFFEWFYSAIDYPWFARQEFVEYLDHVGLGHVPRLTRVEWGVIRSSLGKPRRFSAQFLKEEKEKLYLYRDSVRKHYDELNTGTREGLPMDLARPLNVSQRVISVHPMSRESHDGSVLTVDHCRYRIQFDHPELGVEFVKDTECMPLNPLENMPASLARHYALSTYDIQNPSEEKMHDRVQENMPEGYLKLSCDTGHPLNSPIYNVSNSLKEEKVDISSSDPQAQHVVDGALDLQMYNSQPSSIGHIHAREADVQALSELTRALDKKELVLRELKCMNNEVVESQKDGHHALKDSESFKKQYAAVLFQLSEINEQVSLALLGLRQRNTYQENVPYTSIRRMSKSGEPDGQLTDLDNNASDTNGFHVSEIVDSSRIKARKMVYRAVQALALLRKDENNGVNIEEAIDFVNNQLSVDQTEGSSVQQTQAAQDQRLPSTPNPPSSTHADTSDANPPEQKELQIPSELVSRCMATLLMIQRCTERQFPPSEVAQVLDSAVASLQPCCSQNLPIYTEIQKCMGIIRNQILALVPS*