Information report for Thecc1EG034392t3
Gene Details
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Functional Annotation
- Refseq: XP_017981354.1 — PREDICTED: transcription factor TFIIIB component B’’ isoform X5
- TrEMBL: A0A061FEE1 — A0A061FEE1_THECC; Homeodomain superfamily protein isoform 3
- STRING: EOY15261 — (Theobroma cacao)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Citrus sinensis: orange1.1g005589m
- Gossypium arboreum: Cotton_A_21109_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D09G0881, Gh_A09G0859
- Manihot esculenta: Manes.11G084700.6.p, Manes.11G084700.5.p, Manes.11G084700.2.p, Manes.11G084700.8.p, Manes.11G084700.7.p, Manes.11G084700.1.p, Manes.11G084700.4.p
- Populus trichocarpa: Potri.010G020900.1, Potri.010G019600.5, Potri.010G019600.3, Potri.010G019600.4, Potri.010G019600.2
- Ricinus communis: 30131.m007077
- Vitis vinifera: GSVIVT01023816001
Sequences
CDS Sequence:
- >Thecc1EG034392t3|Theobroma_cacao|MYB_related|Thecc1EG034392t3
ATGGACGATTTTGATATATTTTCAGATAAGTCTCTAGTAACCCAAGCTCGTGCTGGTGCTAAGTTTCAACCCAGAGCCAAACTAAAGTCTAGAAAGGAAAATGTTGCATCAATTCCTTGTAATAAAAAGGAAGAGGTCGTTACACAATCCTTGTCTAGTTTGGACAATAGATTGACAAGTCCAAGAGGTTTGTCTGTAGATACATCAACAACATCTGGAACTGAAGAATCCTTGAAAACCAATTATGAGGATTTATCCCAAATTGCTGTTAACAAAGCAGATGATGTTGGTTTCATTGATGCACCTAGATCTGATATTCCGGTGACTGTCAATGATCATGATAGCCATTCTGTTCCTAATATATGGGCAAAAGATGTAGATTTTGATTTGGATCCCTTTGATGATGTTGCAAACCAAGTCACAAATAATGGTCGAGCTGGTGGCAAGTTTGAACCCAAGACTAGACCTAAAGCTTGTATTGTAGACCCTGATGGCGTTGTAGATGACTGTGGGAGCTCAGAAGTAATGACCTCTTCTCAAGTTGCTGTCACAGATTCTTTGCTTTCAGAGGTTGCCGTTTCCAATGGTTGTCATGATTCACATTCTAGTTTTGGAAGATCAGTTGGGGAGAATGCAGATATATTTTCTGGGTTGGAATGTCTCGACCAATTTCTTACTCAATCTTCTAATAATAATGGAGGTATTCAGATTGATGATGAAGGAACAGGAGCACAGGAAGCAGGGGCTTTCCCTGATGTGGAGACTCAAGATATCATGTCTGGTGCAACCATTGCTTCTGATCCTTCTACCTCTGAGTTCCCAGTGAATGAGGAATTGACAAACCTCACAGAAGCTTCTAACCCAGGTGTTACACTTTCTGGAGATTTTCCTAGCATGCCTGGAAAACTGAGCTCTAATAGCAGGAAAAGGGAGGCCTCTCCGATACCAAATCCTTCTCAAAAGTCCAAACAATCTTCTGCTAGTGATGGGGGGAATGAAAATGGTAAAGCAACAAAGCGGTTGAGAAAGCAGGTAACTAGTCCTAAGCTTGTTGATGATCATGAGGATGGGACTTGTAATGATGAGGGCCTAGCCACTGAACCTCCCACTAGTTCTGCTATAGATGAGGATAGAGATGATGGTGATGACGATGATGAATATAATGCGGAGAGTGCATTTTCAAAGAGGAGAACTTCTAGGAGGTCAAAGAAACCGATGGCTGAAAATGAAAAACCTCCTCGAAAGCGTAAGACAGCTAAAGAAAAACAAGTTGAAAAGCAAAAGAAAGTGAATGAAGCATCAGATCAGCCAACAGAAGAACAGCCCCGGAAGTTTTCTCATTCAACTCGTAGAAAGAGAAGATTTGTGGATGAGTCTTTGCTTCACACCCCAGAGGATGAAATTGACTTTGCAAAGGTGGCCTTGAAGGATATTATTCTGCTTGCAGATTATAAGGAGCGAATAGCAAAGAAAGAGGCAAAAGCATCAAAAATACCATTGACCAATCAAAGTACCAAAAACACTTTTCCTGAGGAAAATGCTCATAATGAAGAAAGCTCTATTGCTTCAGAACAAGACCAAGGATTTACAGATGATCAAATGAGTGGTGGGGCTCAATCGAGTTCCTTCTTCTTAAATTACCAGTCTTACATGGACAAAGAACCCAGAGCAAAATGGACAAAACAAGATACAGAATTGTTTTATGGGGCCATTCGGCAGTTTGGGCCTGATTTTTCATTGATACAACAACTTTTTCCTGGAAGAAGTCGTCATCAGATTAAGTTGAAATTCAAGAATGAAGAGCGTCGATATCCATTGAGGCTTTCTGAGGCTTTAGCAAGTCGTACCAAAGATCATTCCTATTTTGAGAAGGTGATTGAACAGTTGCAGCAAGTTGCTGGACAGGCAGAGCGGGAGTCTACTGGAGATGTTTCAATGGATTTGACACGTGAAGAGGCAGAGTTGACTCCTGAAGCTAATGGGAAAGCAACAAAAGCTGAGCAGGATGAGGATGAAGCAGTTGGAGATCAACAAGCAGATGTTGCTGAAGACCGTAGTACTTTTAAGTCTGATGAAACTGATGATGATGATCACGAGGACATATTGAGTTCATATAGAAGTGCATTTTAG
Protein Sequence:
- >Thecc1EG034392t3|Theobroma_cacao|MYB_related|Thecc1EG034392t3
MDDFDIFSDKSLVTQARAGAKFQPRAKLKSRKENVASIPCNKKEEVVTQSLSSLDNRLTSPRGLSVDTSTTSGTEESLKTNYEDLSQIAVNKADDVGFIDAPRSDIPVTVNDHDSHSVPNIWAKDVDFDLDPFDDVANQVTNNGRAGGKFEPKTRPKACIVDPDGVVDDCGSSEVMTSSQVAVTDSLLSEVAVSNGCHDSHSSFGRSVGENADIFSGLECLDQFLTQSSNNNGGIQIDDEGTGAQEAGAFPDVETQDIMSGATIASDPSTSEFPVNEELTNLTEASNPGVTLSGDFPSMPGKLSSNSRKREASPIPNPSQKSKQSSASDGGNENGKATKRLRKQVTSPKLVDDHEDGTCNDEGLATEPPTSSAIDEDRDDGDDDDEYNAESAFSKRRTSRRSKKPMAENEKPPRKRKTAKEKQVEKQKKVNEASDQPTEEQPRKFSHSTRRKRRFVDESLLHTPEDEIDFAKVALKDIILLADYKERIAKKEAKASKIPLTNQSTKNTFPEENAHNEESSIASEQDQGFTDDQMSGGAQSSSFFLNYQSYMDKEPRAKWTKQDTELFYGAIRQFGPDFSLIQQLFPGRSRHQIKLKFKNEERRYPLRLSEALASRTKDHSYFEKVIEQLQQVAGQAERESTGDVSMDLTREEAELTPEANGKATKAEQDEDEAVGDQQADVAEDRSTFKSDETDDDDHEDILSSYRSAF*