Information report for Sphfalx0247s0010.1.p
Gene Details
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Functional Annotation
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009734 — Biological Process — auxin-activated signaling pathway
- GO:0010600 — Biological Process — regulation of auxin biosynthetic process
- GO:0003677 — Molecular Function — DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT5G17300.1
- Cajanus cajan: C.cajan_15741, C.cajan_36073
- Daucus carota: DCAR_003410, DCAR_003410
- Glycine max: Glyma.13G152300.1.p
- Lotus japonicus: Lj6g3v0390140.2, Lj6g3v0390140.1
- Malus domestica: MDP0000187927
- Panicum virgatum: Pavir.4NG338700.2.p
- Prunus persica: Prupe.2G200300.4.p, Prupe.2G200300.6.p, Prupe.2G200300.2.p
- Salvia miltiorrhiza: SMil_00008639-RA_Salv
- Ziziphus jujuba: XP_015902737.1
Sequences
CDS Sequence:
- >Sphfalx0247s0010.1.p|Sphagnum_fallax|MYB_related|Sphfalx0247s0010.1.p
ATGATCATAATGACACCCAATTCAGCTGGCAGTGGAGAGCAGCATCAGACAGGAGGAGGGGGAGGTGGGGCCGGCAGTGAGGGAAGCTTCCAGTGGTCAAGTGCGGCACCGGTGGGGTCAACAGGAACACCCATCCAGGATGATGCTCTTGAAGGCACCAAAGTAAGAAAGCCTTACACCATCACGAAGCAGAGGGAGAGATGGACTGGTGAAGAGCATCAAAAGTTTCTAGAGGCTTTGAAGCTCTATGGTCGAGCTTGGAGGCGGATTGAAGAACATATCGGCACCAAGACTGCAGTTCAAATTCGGAGCCATGCCCAGAAGTTTTTTTCCAAAGTGGAGAGGGATCAGACTGTGCCTCCTGGTGGTGGTGTTGTTGGCATGGACACAGGAGGGATGGTGCAACCTTTGATTGACATCCCTCCACCACGCCCCAAGCGCAAACCTTCTCATCCTTATCCTCGGAAAGCCAAGGGTAATAATAACAATGTTCTCAAACACTCCACTGAGGATGATACACCCATTCCAAGTTCTTCCTCAGGATCTCTTGCCACAGCAAGACCTGCTGAAGATGGGTTGGTGAAGAGCAGCACAAGGCAGGAAGATGATGTGACAGAGGTGCATAATAAAGAAAGCTCCCCTGATGCTCATCCCATAGAAGAAATTTCTGGAGAGGAGAAGCTCACAGCTGTTGGACCACCGATCCGGGTTTTGTCTGACCCTTCTTCTTGGGTTCCATTCCCTGCTTTCCATCACTATCCTCAATGGGGAAACTATTTCCCAAACCAGCACATACCCAACTGTAATCAGCAGCCTGGCGGCTCTTATGGGAATTTTGAAAAAATGGCTCAGCTTGCTGCCCTTTTCATGTCCAGAGGACTTATGCTGCCATGGCATCCTTCACAAGTGACTTTAACTTCTTCTTGTGGACCTCAAGATAGGTCAGCTGTGCCAGAGACTCTGTCTGCAATGCCTGGATTTTGGCCTGCCATTGACTCTGGAACAACTACAATCACTGCATCTGGCATTCCTGAGTTTGGGAGCCACAATTCATTCAGGGGGACTTCTAGTGTTCCTGAGGATGAAGCAGCAAAAGCTGCCATGGCAGCAGCCGCTTCAGCTTGGTGGGCTCTCCAGAATGGAGGAGCTTCACCACTGTCACTGGCAGCTATGAGAGCTCTTTACAATCCAGGAATGGCAACCATGCCGAGTCCTTTCCTGTTCTCTCAAGGAAAATTGATCCAGCATGATGCTGCCAAACTGCAAGGTCCAGAACCTGAGGGGGAGGTTGCACCTATTCACACACAACAAGCTCCTCCAGAGGATTCTTCCCAGGAGCTTGTTGTGCATAGTGGTGGTCATCGGCTTGTGAGGTCAGATGCTGTTCAAATGGCTGAGAGGGCTATGCAGGTGAAGGAGGTCAAGGCAAAGAGAGAGGATGTTGTGACAGGAAGTTGTGGAGGTTCCTCTGATGTGTGCATGCCATCATCTTGGGGAGGAGGAAGCTGTTTGAAGCCTGGGAATGGAGGTGGCCAAAGCAAGGAATGTGGGCAGAGAGTTGAACTTGTCAACCTCAGCAGAGAAAGCATAATCTGTAGGAGTCCTTCGAATGTTGGTAGTCCACCTACCAAACTTCACAAGCTCAAAAGTCAGCTATCTGGATTAGTTCAAAAAGAGCTGTCTTCCGAGCATGCCAGAAGTTCAAAGGATGAAGGGGATGAAGTTGGGTATGAGAATTGGAAGCACTTACGAGATGAAGCTTTCAGTGGCTTCAGCATGGTTCCAGTAGTAACGTGCTCAAGCTCAAAGCTTGGAGTTTGTGTTCCACCAGCTGCTGCACTTCAGCTTCTGAAATCCAGAGATAGCAGTAGTGGGTCTGGCTGTTTCGCTGCATTGTACACAAATGAAGCTCCCGATCAAAAGAGCTCAGAGGAGGAACATACCCCTGTGCTGCAAACTTGTTCAGATGGTGAAGCGAGTGGGAGTGATGTAGGAATGCTTGCTGAGAATGGTTCTGGAGAGGGTGGTGGGGGCCCAAGCTCAAATTCATCAGCCTGTGGGAATCTTCCTGAGAGAAATGGTCATTTGGGTTCAAGTGAAGGGTCTTCAGATGTAGAAGCCCCTTCAAATGTGCCCTCCAATTTCAGGGGAGAGACAAATGAACAAAGTTCGTCAGAGGCTGAGATGGTTGAGACCAAGGCGGACGAAGCGCAGGTTGGTTTCAGGTGCTTTTCTCATGAAGATTTCACTTCTTCCAGGAAGGACAGTGAAAAACATCATCCCCAGGAACGCACATTCAGGCTTTTACCAAGAAGTTTGTCATCAGAAGGTGAGCAGCAAAAGGAAGCAACATTGGGAAGGAGTCAAGTAGCTTTCCAAGCTCTCTTTGCACGAGAAACATTGCCCAGAACCTTCTCACCACCTCCAAGGGACTCTCTGGCAACTTGCAGAGCTCCGACACGTGATTCAGGGTTTGTTAATCAGCAGGCTTTGTCTCTGTGTCTCCAGAGTAGGATATCTCATAGCAAGCCTTTGTCTTCTGTTTCCTTACCTGCTGATGAAGGCCTACCTTTTCGCCCTCACAAAACTTGTGTGGCTGACCAAGACAGTGCTTTCAATGCTTGGCAACCTTACAAAGCTTCGAAAGGGGTTGGCATCAGGATTGATAAGTGTGAAGGCAGCAGCATTACAACAACATCATCTGGAGCTCAGGTCCCCCAACAACATCCAGAAGAGCATCACTCTCCTAAACGAACAAAAGACATCAAAAGGAAAGAGAGGTATGGGGAAGGGGCAATGACCATCAATTGGCTTACATTAGGAACAGAATCCTCCTCTGGCCTTGAACTGGTGAAGGAAGATTCTGAGGACACAACAGATTTCAAATCACAACATGAAAGTTTACACATGGAGACTTCAACTCCACATGTAGATTTCTTTCCACAGTTGAAGAAAAAAAAGTTTATTGCTTCTTCCAACAAGGTGGATGATGTGGGTGGTGGCTCCTCACTGTTGACAATGTTGCCACTCAGTTGTTCAGAACCCTCGAGTGGCAAAACTCAAACCCACATGTTTTCATTGTCTATAGCAACAACAACATCCGGGAGTGACCTTTCCACTGTGTCGAGCACAAGAAGTGTGAAATACAGTGGTCTAGGATTTGTACCATATCAAAGAGCTTCTTTGGAGTCTTCACTTAAGCTGTGA
Protein Sequence:
- >Sphfalx0247s0010.1.p|Sphagnum_fallax|MYB_related|Sphfalx0247s0010.1.p
MIIMTPNSAGSGEQHQTGGGGGGAGSEGSFQWSSAAPVGSTGTPIQDDALEGTKVRKPYTITKQRERWTGEEHQKFLEALKLYGRAWRRIEEHIGTKTAVQIRSHAQKFFSKVERDQTVPPGGGVVGMDTGGMVQPLIDIPPPRPKRKPSHPYPRKAKGNNNNVLKHSTEDDTPIPSSSSGSLATARPAEDGLVKSSTRQEDDVTEVHNKESSPDAHPIEEISGEEKLTAVGPPIRVLSDPSSWVPFPAFHHYPQWGNYFPNQHIPNCNQQPGGSYGNFEKMAQLAALFMSRGLMLPWHPSQVTLTSSCGPQDRSAVPETLSAMPGFWPAIDSGTTTITASGIPEFGSHNSFRGTSSVPEDEAAKAAMAAAASAWWALQNGGASPLSLAAMRALYNPGMATMPSPFLFSQGKLIQHDAAKLQGPEPEGEVAPIHTQQAPPEDSSQELVVHSGGHRLVRSDAVQMAERAMQVKEVKAKREDVVTGSCGGSSDVCMPSSWGGGSCLKPGNGGGQSKECGQRVELVNLSRESIICRSPSNVGSPPTKLHKLKSQLSGLVQKELSSEHARSSKDEGDEVGYENWKHLRDEAFSGFSMVPVVTCSSSKLGVCVPPAAALQLLKSRDSSSGSGCFAALYTNEAPDQKSSEEEHTPVLQTCSDGEASGSDVGMLAENGSGEGGGGPSSNSSACGNLPERNGHLGSSEGSSDVEAPSNVPSNFRGETNEQSSSEAEMVETKADEAQVGFRCFSHEDFTSSRKDSEKHHPQERTFRLLPRSLSSEGEQQKEATLGRSQVAFQALFARETLPRTFSPPPRDSLATCRAPTRDSGFVNQQALSLCLQSRISHSKPLSSVSLPADEGLPFRPHKTCVADQDSAFNAWQPYKASKGVGIRIDKCEGSSITTTSSGAQVPQQHPEEHHSPKRTKDIKRKERYGEGAMTINWLTLGTESSSGLELVKEDSEDTTDFKSQHESLHMETSTPHVDFFPQLKKKKFIASSNKVDDVGGGSSLLTMLPLSCSEPSSGKTQTHMFSLSIATTTSGSDLSTVSSTRSVKYSGLGFVPYQRASLESSLKL*