Information report for Sopim01g073950.0.1
Gene Details
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Functional Annotation
- Refseq: XP_004229352.1 — ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800
- TrEMBL: A0A3Q7EH34 — A0A3Q7EH34_SOLLC; Uncharacterized protein
- STRING: Solyc01g073950.2.1 — (Solanum lycopersicum)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Sopim01g073950.0.1|Solanum_pimpinellifolium|MYB_related|Sopim01g073950.0.1
ATGGAAAAAGACTCAGCAGCAGCTACAACGACGACGAAGAAGACGATATGGAGTACATGGGAAGAGCTTTTGTTAGCGTCTGCTGTGAAAAGGCATGGGCTAAAGGACTGGGAATCTGTAGCCATGGAACTACAAAATCGTATATCGTTACCGGCTTTATTGACCGCTCAAATTTGTAAGGAGAAATACAGGGACCTCCGCCGCCGCTTCATGAATAGCTATAACAATAGTTATGATGAAAAAATCATAGAACAGGATGTAGATGGAAATGGAGATGTAACGATTCCTTGGATTGAGGAGTTGAGAAAACTACGGGTTGCTGAGCTTCAACAAGAGGTTCAACGCTACGATCTTTCGATCCAGTCGTTGGAGTTGAAAGTGAAAAAAATGGAGGAAGAGAGAGAACAGAGTTTGAAGGCGCAGAGTTTAGACGATGGCCAGAAACCAGATCTGGAGGATGTAAAGGAAGAGAGATCGCAAAACGACAAAAACAGCGGTGCTGATGTTAAGCCGGAGGATTCCACCGGGAAGCCCGTGTCCAGCGAGGAGTCAGACCGCGAAAACCGGTCATTTAACGAGTCTAATTCGACGGAGAACAGAGAAACCGGTGTTAAAAATGAACCGGAACCGGTCGAGATCGGTGAAGACAAACCGGTTCAGGAGATTAAACCGGTCAGTGAAGAGGACTCGTATAACGATAGCAGTTCAGATAGACAGGAGGAAAAGAAAGCCCGTCGGGACTCGGGCGATTTACGTGATACAGTGAGCGGGTCTAAGGAAGAGACTAGGGAAAACAGTGACGTGCAGAGCACGGCAACTTTAACGAAGAGAAAACGGCAGCGCGGTGGCGATGGTGGTAGAAGCGGCGGAGATGCGGCAGAAATGGGTTCTCCAGCCGTTGGAATTAAAAGGGAGGGTGCGGCGAAATCAGAGCCGTTAATTGAGTTTTTAGATGTTATCAGGTCGCATAAGCGCGGCTCTGTATTCAAGCGCCGGCTAGACAGCCAGAAAACGGACAAGTACAAGAGTATGATCCGACAACATATGGATCTTGAAACGGTTCAAGCCCGGATTGACGACGGATCCTATTGCTCTTGCCCATCCAAATTCTACTTGGACCTCCTACTCATCTTCAACAATGCCATCGTCTACTTCGCTAAGTCATCCTCAGAGATAACTGCAGCGAACGAACTCCGTGGCATTGTAATGGAAGAATTAAAAAGGGCCAGAACCCAGTCGAAGGATCTATCACCATTTAAGATCCAACCCAAGCCCGAATTGGAGAGATCCGATTCCTTGCTTGCAAAACACAAGTCTACCGTTCCTATAGTAGTCTGTCGCAAGAGAAGCTCCATTTCAGCAAAAGCAGCAGCTTCTTCTGGTACTAACAAGACAGAAAAACCAGCTGATAGTAAACCTCCTCTGAACCCAAAGCCACCTGCGGTAAAATCTTCTTCGAATGAAGAAGAGAGTTCAATCAAGCTTGGGGTGAAAGAAAAGCCAGTGACTGGAGTAAGAAGTATGAGGAGAAGCAGCAAAGGACGTTCGAATAATAATAATGCTTCACAATCCAACAGCAACCAAAACACGAATGCTAAGCAAAGCAATAGTAGCGGGGAGAAAAAGGAAGAGGTGAAACCGGAGAAGAAGAAAGAAGAAGGCAAAAAACGAGGAGCTGCAGCGGACTTCTTGAAGAGGATAAAGAAGAATTCTCCTACGAAAGGAACGTTGGTGGAAGCGCTGAAGAATAATCCTCCAGAGGAGGTTGTTGTTGTTAAAGGTAAAAATAGTAAAGATCAGCAAAAGAAAAAAGTTGATGAACGGAGAGAAGCTCCAGTGAGGCGAAGTGGCGGCGGTGGCGGAGGCAGTGGTGCTAGCAAGGATGAAGGTAGTCCGTCGAAGAGGAGCGTAGGTCGACCACCGAAGAGAGGTGGTAGAGAAGTAGTTGTGCAGGAAAAACGTGGAAGGGAAAATAGTGAAAAAGATGATTCAACGAAACGGCCAAAGAAACGGTCAAGGAGGAGAAATAAAAGGAAGAAACTAAAGAGAAAAAAGATTTTGAGTGAACATGTTTGTATGGAGCTGTTGATTTTTTACATACCTGTATTATTCTTTTTCCAGCTCAAAAAATATACGATACATAATATTTTTCTCCGTTCAATAATAATTATTCACCTATATTTAGTTCCTAATATTGCTATCATTGATTTTCTTGATTACATTTTTCAAGACACTGTGTTTATTATATTAAAAAAGTAA
Protein Sequence:
- >Sopim01g073950.0.1|Solanum_pimpinellifolium|MYB_related|Sopim01g073950.0.1
MEKDSAAATTTTKKTIWSTWEELLLASAVKRHGLKDWESVAMELQNRISLPALLTAQICKEKYRDLRRRFMNSYNNSYDEKIIEQDVDGNGDVTIPWIEELRKLRVAELQQEVQRYDLSIQSLELKVKKMEEEREQSLKAQSLDDGQKPDLEDVKEERSQNDKNSGADVKPEDSTGKPVSSEESDRENRSFNESNSTENRETGVKNEPEPVEIGEDKPVQEIKPVSEEDSYNDSSSDRQEEKKARRDSGDLRDTVSGSKEETRENSDVQSTATLTKRKRQRGGDGGRSGGDAAEMGSPAVGIKREGAAKSEPLIEFLDVIRSHKRGSVFKRRLDSQKTDKYKSMIRQHMDLETVQARIDDGSYCSCPSKFYLDLLLIFNNAIVYFAKSSSEITAANELRGIVMEELKRARTQSKDLSPFKIQPKPELERSDSLLAKHKSTVPIVVCRKRSSISAKAAASSGTNKTEKPADSKPPLNPKPPAVKSSSNEEESSIKLGVKEKPVTGVRSMRRSSKGRSNNNNASQSNSNQNTNAKQSNSSGEKKEEVKPEKKKEEGKKRGAAADFLKRIKKNSPTKGTLVEALKNNPPEEVVVVKGKNSKDQQKKKVDERREAPVRRSGGGGGGSGASKDEGSPSKRSVGRPPKRGGREVVVQEKRGRENSEKDDSTKRPKKRSRRRNKRKKLKRKKILSEHVCMELLIFYIPVLFFFQLKKYTIHNIFLRSIIIIHLYLVPNIAIIDFLDYIFQDTVFIILKK*