Information report for Solyc09g008100.2.1
Gene Details
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Functional Annotation
- Refseq: XP_025888547.1 — TSL-kinase interacting protein 1 isoform X3
- Swissprot: Q8LJT8 — TKI1_ARATH; TSL-kinase interacting protein 1
- TrEMBL: A0A3Q7HWQ2 — A0A3Q7HWQ2_SOLLC; Uncharacterized protein
- STRING: Solyc09g008100.2.1 — (Solanum lycopersicum)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0003682 — Molecular Function — chromatin binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: CA09g02130
- Nicotiana benthamiana: Niben101Scf02315g00012.1
Sequences
CDS Sequence:
- >Solyc09g008100.2.1|Solanum_lycopersicum|MYB_related|Solyc09g008100.2.1
ATGCAAATGGTACAACAGGTCTCCTTAGAGCGTGACACATGCCTCCATCCCGAGACTTTTATGGGCAAGGATGGGCTTTCTGGTGTAACACAACACCCTGCAGTGGCACTGTCAGTGATACCCTCAAATGATCATCTTGCTTCACAGCAGTCTGTGCTGACACATGATCATGCAGTGACACAGCTGGTACCATCCTCCCAAGACCATGTCATGCTTCAGCTGCCAGCCAAAAGACAGCCACGTCAATGGGCTGCATGGACACGTCAGGAGGAAGAAAGCTTTTTCTCTGCACTGCGACAAGTTGGGAAGAATTTTGAGAAAATTACTAGTCGCGTGCAGAGCAAAAACAAGGATCAGGTCAGACATTATTATTATCGTCTAGTGAGGCGTATGAACAAGTTGTTGGGTCCAGAACTTTGTCTTGATGCCAAAAATTCCAAGGATACTAATGCTGCAATGTTGCGATGGTGGTCTTTACTGGAAAAATATAGCTGTAAAGCCTCAAAGCTTCATTTGAAACCACGGAGGTTTAAAATATTTATTGAAACTTTGGAGAGTCAGCTGTTGAAAGACCGGAAAAAGAATGTAAGAAGGCGTCCTTCTCAAGGAGAAAGTAGTTCTACAGCTGCTGGATCTCCTTCAAGTCATGGCAGAGTGTCAACTAATGATAGTCGGACAGTTAAAGTGGTTCTTCTTGACAACCAGGATGTACAGAAATTTGGATCTGGAAAAGGCTCTTCTATAAAACGCCATGTCATGGGTGTCAATAGAAGCAATGCAAAAGTAGACTCTTCTGTGAAAAATGCTAGACATCGCCGAAGGACAGGTTCTGCATCAACAGCTGCATACAAAAGGTGGGAGAAGGCTGCAATTGCTGGAGTTTCATTGGTAGCTGATGCAGCAGAACATTTGGAACGAGCAACTATTGATAAAGATGTCGGACTGGTCCAGAATTCGCAGGCTATAAATGGTTTTGAACATGTTGGCAAAAATGTGCATTCTTTGCCGACTTTATCCCAAAATCTGTTAAACGAGACTAATTTACAGAGTTGTATGAAACTCAAGCTCCAGCTGTTTCCTGTTGATGAAGGAACTAGAAGATCCCTGGAAATGGATAATCATAACCCTTACTTGGAGCTCACTCTAAGTAATCGAAAAAAGATGTCATCCGTTTTGGAGCATCTCAATCGTAAATGGGGAAGTTCGAGCATAGCAACTGGAGAACTGGTGCTTTTTCCTTACCATGTACAGATGGAAAACCTGGTGCAATCCCTGAGATGGACCAAAGATACCACACAGAGTGCGGCTGATGTGCATAATCTGATCGGAAGCCCTCCAGTTTTTCGTCTCAGATATGGTTGGTTTCCAAATGCTGAGCTTGGAACACCTCTTGAACTATTGTCATCTGCCATTCCGTTTATGCAAAATATTAACCCTAACATCACAAATGAAAATAATGCGGAAATACTAGCATCATCCCCTGGTAAACTTGTACGATTTTCTAAAGAACCACTAGCTTCTAACCCAAGAATGACTGTGACATCCTCCTCAATCAAGCTGTCTGGTGAGTCAAACTTGCAAGCAAGCATGGGTCTAAATACCTACACTTATGATCATGATGGAACTCTGCCATTGAATAGAAGGGAGAATGGGGATGCAACCACAGCAGAACAAGCTGAGATGCATGATATGCAGGGAAGCAAGGCCAGTGCTTTGTCGGCAGGGGATTGGGAAGATAGCCTTACCAACATAAGTGTCGGAGATCTTCTCTTTGATGCACCTGATGATGAGGAAACAGACTGTATTGACTCAGCTTTGTGCGGAAGCTCTCATTTTCTCTCACAGATGCCATTAAGCTGTGACTCGTTTGATGCAGCGATTGCTGCTCATATATATAAACATCAAAGCAAAGCTGATTCTCAGATGGCTCTTCCACCTCAAGCATCTTCCATTTGGAATGCTGAAGATACATGTGATGCTTTTGCATTCAAGAAAAATGTTGCTTTCAGTGACAAATCGCAGTGTTCATCCAGCAATGTTGGTGCAGAGAATTCCCAGCGGATTGCTCAGTCATCTTCCCTGGTATTGGATGCAGTAATCAAGGATTTGCCTGGGAACATGGAGTCCTTTAACGGTGAACCTGCTCATGATGACGCAGTGGATGAGTGTCAATCGGATGCACAGGCGTTGGATGGTTCTTCAAAGGATCTTAATGGGCTCTCTGGCATATATTGGACAGACTCTTTAGGACCGCTAGAACTGGACGCCCCTTCATGTAGATATCATAGTGAAGACATAACTCTGAGTGATAGTCTTGGTGGTTTTAACCGCCTCATAGTTAACAGTCTAGATGCATTCCAAAATTGCTCGTTCTTTGGGTTGGACAAAACAGAGCCTGGATCTACTGTTGAACCTGTAAAGACTTCAGATTTGAAGATCGGCGCTGAAGTCTAA
Protein Sequence:
- >Solyc09g008100.2.1|Solanum_lycopersicum|MYB_related|Solyc09g008100.2.1
MQMVQQVSLERDTCLHPETFMGKDGLSGVTQHPAVALSVIPSNDHLASQQSVLTHDHAVTQLVPSSQDHVMLQLPAKRQPRQWAAWTRQEEESFFSALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPELCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFIETLESQLLKDRKKNVRRRPSQGESSSTAAGSPSSHGRVSTNDSRTVKVVLLDNQDVQKFGSGKGSSIKRHVMGVNRSNAKVDSSVKNARHRRRTGSASTAAYKRWEKAAIAGVSLVADAAEHLERATIDKDVGLVQNSQAINGFEHVGKNVHSLPTLSQNLLNETNLQSCMKLKLQLFPVDEGTRRSLEMDNHNPYLELTLSNRKKMSSVLEHLNRKWGSSSIATGELVLFPYHVQMENLVQSLRWTKDTTQSAADVHNLIGSPPVFRLRYGWFPNAELGTPLELLSSAIPFMQNINPNITNENNAEILASSPGKLVRFSKEPLASNPRMTVTSSSIKLSGESNLQASMGLNTYTYDHDGTLPLNRRENGDATTAEQAEMHDMQGSKASALSAGDWEDSLTNISVGDLLFDAPDDEETDCIDSALCGSSHFLSQMPLSCDSFDAAIAAHIYKHQSKADSQMALPPQASSIWNAEDTCDAFAFKKNVAFSDKSQCSSSNVGAENSQRIAQSSSLVLDAVIKDLPGNMESFNGEPAHDDAVDECQSDAQALDGSSKDLNGLSGIYWTDSLGPLELDAPSCRYHSEDITLSDSLGGFNRLIVNSLDAFQNCSFFGLDKTEPGSTVEPVKTSDLKIGAEV*