Gene Details:

  • Gene ID: Solyc03g113620.2.1
  • Gene Name: LOC101262503
  • Gene Family: MYB_related Family
  • Description: MYB_related Family protein
  • Species: Solanum lycopersicum
  • Source: MYB_related family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_004236161.1  — transcription factor MYB1R1
  • Swissprot:  Q2V9B0  — MY1R1_SOLTU; Transcription factor MYB1R1
  • TrEMBL:  A0A3Q7FSP5  — A0A3Q7FSP5_SOLLC; Uncharacterized protein
  • STRING:  Solyc03g113620.2.1  — (Solanum lycopersicum)

Gene Ontology:

  • GO:0006338  — Biological Process — chromatin remodeling
  • GO:0006357  — Biological Process — regulation of transcription from RNA polymerase II promoter
  • GO:0035066  — Biological Process — positive regulation of histone acetylation
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding
  • GO:0003682  — Molecular Function — chromatin binding
  • GO:0003700  — Molecular Function — transcription factor activity, sequence-specific DNA binding
  • GO:0003713  — Molecular Function — transcription coactivator activity
  • GO:0004402  — Molecular Function — histone acetyltransferase activity

Family Introduction:

  • A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

Sequences:

CDS Sequence:
  • >Solyc03g113620.2.1|Solanum_lycopersicum|MYB_related|Solyc03g113620.2.1
    ATGATGTCGAGTTTCTGTTCACAGTCGGCAAACGACGGCCACAACTCTTTCACCTGCGCCGGCGAGTCATCGCCGGCAGCCGTGTCTGTCGGCGGAGGCGTAGGAGGAGGAGGAGAGATCATGCTGTTTGGCGTGAGGGTGAAGGTAGACCCTATGAGGAAAAGCGTGAGTTTGAACAATCTGTCTCAGTATGAGCAGCCTAATTCTAATGATAATAATAATAATAATAGCAACAGCGGAAATAACAATGACGCTTCTAAAGTTGCCGCCGACGAGGGTTATGCCTCTGCCGACGACGCTGTTCCTCACCACTCCGGTAGTGGCCGTGAGCGTAAGCGAGGAGTTCCATGGACGGAGGAAGAGCACAAGCTATTCCTTTTGGGATTGCAGAAAGTGGGAAAAGGAGACTGGAGAGGAATCTCTAGAAACTTCGTAAAAACTCGCACACCGACACAGGTTGCAAGTCATGCTCAGAAATATTTCCTCCGGCGAACTAACCTCAATCGCCGGCGCCGCCGTTCTAGCCTCTTCGATATCACCACTGACTCGGTATCTGTACTAGCAACAGAAGAAACGAAAAATCTGCAACGACACTCCATTCCATCATTGCCTTGTATAGAAACATCAAAAATGAATGCATTTCAGGTGACATCTGTGCCAGTAAATTTTGGGCCAGAGAACCCAATAGAAAGTCCAATCCTTAGACAAGGAAATCAAAGTTATTATAATGGATCATCATCAATATTCCTCCGGCCGGCTCCTGTTGTTGTTTCGTTGCCTAATTCATCAAAAACAGCTGACTTTAACTTGAATCAAAGCTCAGCAATGGAGACATCTTCGTTATCGTTGACATTGTCGTTATCACCATCATCATCATCTACTAGACACTCAGGATTCCAAGTGATGTCAAATTTTAAAAATGGAGAGAGCATCATCAGTGTGGCATGA
Protein Sequence:
  • >Solyc03g113620.2.1|Solanum_lycopersicum|MYB_related|Solyc03g113620.2.1
    MMSSFCSQSANDGHNSFTCAGESSPAAVSVGGGVGGGGEIMLFGVRVKVDPMRKSVSLNNLSQYEQPNSNDNNNNNSNSGNNNDASKVAADEGYASADDAVPHHSGSGRERKRGVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRTNLNRRRRRSSLFDITTDSVSVLATEETKNLQRHSIPSLPCIETSKMNAFQVTSVPVNFGPENPIESPILRQGNQSYYNGSSSIFLRPAPVVVSLPNSSKTADFNLNQSSAMETSSLSLTLSLSPSSSSTRHSGFQVMSNFKNGESIISVA*