Information report for Sobic.009G027300.8.p
Gene Details
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Functional Annotation
- Refseq: XP_021303528.1 — uncharacterized protein LOC8071259
- Refseq: XP_021303529.1 — uncharacterized protein LOC8071259
- TrEMBL: A0A1Z5R0K6 — A0A1Z5R0K6_SORBI; Uncharacterized protein
- STRING: Sb09g002290.1 — (Sorghum bicolor)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.7NG164300.1.p, Pavir.3KG124100.1.p
- Setaria viridis: Sevir.3G048600.8.p
- Zea mays: GRMZM2G089406_P01, GRMZM2G447745_P01
Sequences
CDS Sequence:
- >Sobic.009G027300.8.p|Sorghum_bicolor|MYB_related|Sobic.009G027300.8.p
ATGAGGGGTTCATACCGGAGGTCCCCATACAGAGGCGGCTACGGAAGCGACTTCTCCAGAAACCATCCAGAGCAGCCCCCTCCGCCACCACCCAGGAGGTCTCCGTTGAGGTCAGTTGCTGTTCCGATCTGCTATGACCCTCCGGGCAATAGAGTTGACAGGGGGGATAGGGACAACCTCCCACGGGTGACACCATGGCGGAGAAGGGAGAGCAGATCTGAAGCAGCAGATGCTGTTGGCCAAACCACTCGGCTCTCTGCCTCAGGGAAGGAGGCTTCAGCTCAGCCTCTGGCCGTGGCAGGTCCTCATGGGACCGAGGACGAGGCACCAAGGAAGAAGGCACGCCTTGGATGGGGGCAAGGTTTGGCCAAGTATGAGAAGCAGAAGGTGCAAGGCCCTGTGGATCCTGCTGAAGCTGTTGCTGATGGAAGTCCAGCTGATGGCGAACAGAAGACCGCCTCCCTTGCACCTGCGCCTACGCCTACGCCTGTGCCTTCTGTTGCACCTGTACCTCCTGCTGCACCAGTGCCTGATCCTGTGCCTGCGCCAGCACCACCGGCACCACCTGCTGCGCCTGTGCTTTTGTCAGCCCCCGTGGGATGCTCATCTCCAGTTACTGCACCTCCATATTGTTCCTCAGCACCTGAAGATAAATCATGTGAAATGATGCCAAATACGGTCACTAACTCTACTAAAGATGTCTTGGAAGCTGATGATAAAACTTTCAATAATGAATTTTCCATCAAGTTAGATCAGCTCGGTGATGATCCTGTTAGTTCCCTTGCAAACATGCTTGTTGAACTTATCCAACATGATGATTCTTGTTCTGGGGATTCAAATGGCCCAACCAGTACATGTAAGCTGCTCCTACTGAAGGAAAACATTTCCAAGGAGATTGAAAAGACTGAACTCGAGATCGATTCATTGGAAGGTGAACTTAAATCTGTGAATACTGAGGCTTTAACTACTCTTGAAGGTTCTCCCACAGGGGTGCCACATACAGAAAATCTTTCACCTTCCAGTGGGACATCAAAGGTCCCTGGAAGTGTGGAGATCTGTGATACATCTGATATGATAAGAGAACCAGGGGAGCTCATTGGTTCTCCTAAGGTACCTGTGGTGCAGGATGCTGATGTCAAAGGTGCTGATATGATGGAAATTGAAGCAGCTCCAGTTCACAATGCAAAAACAGTTCCTTCAGAAGAGAGTGCTGTATCTCCAGGAGTCGCTGAGGGTAAGGCCTGTGCAGCTGCTGATCTTAGCTCATTGAAAGCTTCTGAAGAAGCTGGGTCTCAAAATGATATTGACAATGACAGGCTGGAAACTTCTTCGTGCCATGCTAATGCTGATTCCATGGAAATAGAACTTAGTGATGACCATAAGTCTGATTTACTCAGTTCTGTCACATCTGCAAATAATGATATAGCCAAAGAAATGAATGAAGTGCTATTTAAATCATTGCCTGGTGATACACCTGACCTTGAGATGTTGGCATCAAGTCATCTTCTGAGCCAAAGGAAGAGTGATTTGATTGTCAAAGAAAGGCTTGGAGTACGTAAAACCAGGCTGAGGTTGAAAGAGCAGATTCTTACAATGAAGTTCAAGGCATATCGTCACTTGTGGAAAGAGGATGTTCGACTACTTTCTGCAAAGAAACAGCGTTCAAAGTCTAATAAGCGCATTGATCAGAGCAACCGAACATCACAAATTGGATCTCAGAGGCAACGCTCCTCTAACCGCTCGCGATTAGCCATGCCTGCTGGTAATTTAAGTACATTCTCAACTCCAGAAATGTCAGATGTTGCAAGGAAGTTGTTTTCAGAATTCCAAATTAAGCGCTGCAGAAATTACTTGAAAATGCCTGCACTGATTATTGATGAGAAAGAGAAGGAATGCTCGAGGTTTCTGAGCAAGAATGGGCTGGTTGAGGATCCTGTTTTAGTTGAGAAGGAAAGGGTGATGATAAATCCATGGACTCAAGAAGAAAAGGAAATTTTTATGGAGATGCTTGCTAAATTTGGCAAGGATTTCTCCAAAATCTCCTGTTTCATTACACATAAAACTACTGCAGACTGTGTGGAGTTCTACTACAAGCATCATAAATCAGACAGCTTCCGAGAAGTGAAGAAACTGTTGGACCTTCGTCAGCAGCAACCCACCAGCAATTATCTTGGAGCGAAATCTGGACAGAAATGGAATCCCGAGTCAAATGCTGCTTCTCTTGATATGCTTGGGGCAGCATCAGTAGTAGCAGCCCATGGCCTTGAATATGCAAACCGAGTGGAGAAAATTTCTGCGAAATCCCTCATCCGGACTTCATATGGGCCCAATGTTCCTTTTGTGTCTAAAAAATCTTCTGATAAGGAGTGCATTGACAATGTCCCTTTGCATGAGAGAGAATCTGTAGCAGCTGATGTACTAGCCGGCATATGTGGCACTCTCTCTCCTGATGGAATGGGTTCATGCATTACTAGTTCTGCTGATCCTGGCCAGAAGATTAGCATGAAAAGAGTGGAACATGTCTTATCCCAAGAAAATGACAAAATCGTTGATGAGGAAGACACACTCTCTGATCAAGAGTGCGAAGTTGATCCAGTTGATTGGAATGATGATGAGAAGTCAATTTTCATTGAGGCTATGAATAACTACGGAAAAGATTTTGCTCGGATCTCGTCATGTGTGAAGAGCAAGTCATATGAACAGTGCAAAGTGTTCTTTAGTAAGGCTCGGAAATCACTCGGTTTGGATTTGATCCATCAAGGGGCAGCTGATGTTAGTATGCCAGCTAGTGATACCAATGGAGGGAGGAGTGATACTGACGAGGCTTGCGCTGTGGAAATGGATTCAGCTATCTGTAGCACTCAGTCTTGTTCAAAGATTGTGATAGATGTTTGTCCTACTGAAGGAGCCATTGGAGGGCCTAACTCTGTTATAATCTCTAAGCAGGCAGGAGAGATATCAAATGGGTGTGATGTAGATGCTAAAATTGAGGAAGACGAGGAGGAAGCTGATAAAAATTGCAGCATTGTTGATGATAAGAGGTCCAGTGATGGTACTCATCAAGCTGTTCCTATTGACATCAATTGCCCAGAAAGCACAGATAAGCTGCAAGGAACTGATGATGTCGTTGACCAAGTAAACGTGCATAGTAGTAGTGCCATCAGCTCTACAACTAAGCATACAATGGCCATGCACTCGGAAGTGAGATCCAGTTTACATTCTATAGAGGTACTTCAAACAGACAAAGCTGAAGGTACTGGTACAGATCCTTCCCAGGTGGAAGAATGTTCACACCATGCTCTTGATAACACACCAATGAAAACTGGAAATTCTGGTGCTTCAGATAGTGGTATCAAGGACAATGTTCACATCTTAAACATGACTGGTACTTCCACCGTTAGTCCTGCATTCACTTCAAGTTATCAGCATTCTGTACCAGGAGATATGCCCCTGCTGAAACCAAAGCCACTGGTCACCCCCCTGACCCCCAAGGATTTAATGCCTGTGCAGTTCAGTTCAGTGCTTCCTGATCCCACTGCATTTCGTTTTGAGGGCATAGCCTCAATAACTACGCCCAACTTTGAGGACAGTGGCAACAGAGTCAGCAGTGCTCTAGGGGCTAAAGACATGAGCAAGTACCCAGCTTTTAAAGACCCATCTGAACTGCAAGTGGCAATGTGA
Protein Sequence:
- >Sobic.009G027300.8.p|Sorghum_bicolor|MYB_related|Sobic.009G027300.8.p
MRGSYRRSPYRGGYGSDFSRNHPEQPPPPPPRRSPLRSVAVPICYDPPGNRVDRGDRDNLPRVTPWRRRESRSEAADAVGQTTRLSASGKEASAQPLAVAGPHGTEDEAPRKKARLGWGQGLAKYEKQKVQGPVDPAEAVADGSPADGEQKTASLAPAPTPTPVPSVAPVPPAAPVPDPVPAPAPPAPPAAPVLLSAPVGCSSPVTAPPYCSSAPEDKSCEMMPNTVTNSTKDVLEADDKTFNNEFSIKLDQLGDDPVSSLANMLVELIQHDDSCSGDSNGPTSTCKLLLLKENISKEIEKTELEIDSLEGELKSVNTEALTTLEGSPTGVPHTENLSPSSGTSKVPGSVEICDTSDMIREPGELIGSPKVPVVQDADVKGADMMEIEAAPVHNAKTVPSEESAVSPGVAEGKACAAADLSSLKASEEAGSQNDIDNDRLETSSCHANADSMEIELSDDHKSDLLSSVTSANNDIAKEMNEVLFKSLPGDTPDLEMLASSHLLSQRKSDLIVKERLGVRKTRLRLKEQILTMKFKAYRHLWKEDVRLLSAKKQRSKSNKRIDQSNRTSQIGSQRQRSSNRSRLAMPAGNLSTFSTPEMSDVARKLFSEFQIKRCRNYLKMPALIIDEKEKECSRFLSKNGLVEDPVLVEKERVMINPWTQEEKEIFMEMLAKFGKDFSKISCFITHKTTADCVEFYYKHHKSDSFREVKKLLDLRQQQPTSNYLGAKSGQKWNPESNAASLDMLGAASVVAAHGLEYANRVEKISAKSLIRTSYGPNVPFVSKKSSDKECIDNVPLHERESVAADVLAGICGTLSPDGMGSCITSSADPGQKISMKRVEHVLSQENDKIVDEEDTLSDQECEVDPVDWNDDEKSIFIEAMNNYGKDFARISSCVKSKSYEQCKVFFSKARKSLGLDLIHQGAADVSMPASDTNGGRSDTDEACAVEMDSAICSTQSCSKIVIDVCPTEGAIGGPNSVIISKQAGEISNGCDVDAKIEEDEEEADKNCSIVDDKRSSDGTHQAVPIDINCPESTDKLQGTDDVVDQVNVHSSSAISSTTKHTMAMHSEVRSSLHSIEVLQTDKAEGTGTDPSQVEECSHHALDNTPMKTGNSGASDSGIKDNVHILNMTGTSTVSPAFTSSYQHSVPGDMPLLKPKPLVTPLTPKDLMPVQFSSVLPDPTAFRFEGIASITTPNFEDSGNRVSSALGAKDMSKYPAFKDPSELQVAM*