Information report for Sobic.007G020500.1.p
Gene Details
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Functional Annotation
- Refseq: XP_021320644.1 — transcription factor TFIIIB component B''
- TrEMBL: A0A1B6PF40 — A0A1B6PF40_SORBI; Uncharacterized protein
- STRING: Sb07g001795.1 — (Sorghum bicolor)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Panicum virgatum: Pavir.1NG176100.1.p
- Setaria italica: Seita.1G142100.4.p, Seita.1G142100.2.p, Seita.1G142100.3.p, Seita.1G142100.1.p
- Setaria viridis: Sevir.1G140500.1.p
Sequences
CDS Sequence:
- >Sobic.007G020500.1.p|Sorghum_bicolor|MYB_related|Sobic.007G020500.1.p
ATGATTGATGATGAGGCCAACTTCGACAATATGCTTGATGCTGCAGAAGAAGTTCAGGCTACTGCAAAGTTCCGTCCCAAGCAACGTCCCAAACCCCAAAAAACAGCTCTGTCTTCCAGATCTGCAGCGCCTAATCCTACTGAAGAAACTGGGGATGGGAAAGTAGGAGCCTTAAATCAAGTCAATTCTTCTAAAGAGCTCACCAGCCAAGAAAGGACATCCTTGATGTGCCCTGGTAGCGAGTCAGTTGATACTGTTGCTGGTTCTCAAGGTACTCTCGGCACACCGTCGGGAGATGCGTTGACAGTTCCCTTGGGTCCTCTGGCTGGTGCTTCTGCTGCAGATAAGATTTCTCAAGATGGTGAGCACAATGATGATCCGTCTAAGTTAGCTATACACCAAGAAAGCTCAGTGGTATCAGATATCAATGTGTCACCTAACAGTTCATGTGGCAAGGCTATTGATGATATAGTTGAATTTGGAGACATGTGTGATGCACAAGTTGAAGAGGAAAGAGTTCCAAAGTTCCAGCCAAAGGTACAGACGAAGCTCCTTAAGGAAACAGCCAAATCTCGGAAGACTAACCAAAAGCTGGAAGCTTCCACTGTAGATGTGGTTACACAAAATGGAAAGGGCAATAATATTGAAACAAGATTCCGTGACGATCAGTTACAGGATCCTAAAAGTCATGAAAGTGTGCAGATCCCAGATTCTGAAGGACTATTGGCAACTGATAATTGTAAAAGTTGCAATTTAGCTAACCTCGTCCTTGAGGAGTCAGTTCAAGAGGAAACAATAGCTAAGTTTCATCCTAAATTGCAACCGGAGCCTGGGAAGGCTTCATCCAAGGTTGCTGTGACTAAAAATAATGTTGCTGCTGTTGCTCCAATGGAAGAAACCATCACCGGTCCAGCCGCTTGGTCACCACAGGCTGTGCATGCTACTGTTGATGTAGACTATCACAACGAACTAATTAGTCCTCCTACCGATGGTACTCAATCAATGGTGGGCAAAGTCCCAGGAAGAGAAAAGGGAAAATCAAAATCTGTATCTTTTTCTCTATCGGATGCTTCTGGGGTAGCTACTCCTACAGATACCAATTCTGAGATGGGTAACATCGGCAAATCCTGTAGTGACAAATTGACTGATGAAAATTTAAGTAACTCATCTCAGCAGATGACTGAAAAGCATTCTGTTACCGAGGATCAATATTCAAATGATCAGGACCACGAGGGGGAGCCACTAGATCATACTGTTGAACAGCAACCAAATTCGGATGTTGGAGAAATAGCATCATCTATGAAACTACGTTGCAGGAAAAAGTTGCAAAAAGTTGGGACACCTAATCACACTGTTGATGACTGTTTTGATGAAGACTGTGTTGAACCTTCATTAGCTGAAGAAGATAATGATAGTGGTGATGATTACACTACTGGTAATAAGCGTAAGGCTAGGAAAAAGTCAAGGGATGGTGTAGAAGAGTCACAACAGCAGAAAGTTCAAAAAAATAAAAGCAAGGTGTCTTCACGGGGCCGCAAAAGAACCTTGAAGGATGAATTGGCAGCGAAGCCTGAGAAGAAGAAGCTGACCCACAGAATTCGTCAGAGGACACCAAAAGAGATTAAGACTTTACTGGAAAGTGAGGAGATAGATCCCATGAAGCTAAGTGCAGCACATCTCAGGTTGTTACAAGAAGCTAGAGAACGTGTTAATCCAAAAGAGATTCCATCTGGGCCATCCTCTAATTCAAGAAGCTTTGGACTTGAAGATATGGATGATTTGGACTACAGAGATGAGGAAGCTAGGTTCTTTGACAATGATGGAACAGAGAACCATGTACAAAATACAACAAAATTGAACTACCAATCCTACATGAACAAACCAGCCCGAGGAAAATGGTCAAAATCAGATACTGACTTGTTTTACGAGGGTATTCGACAATTTGGTAGCGATTTTGCAATGATACAACAATTATTTCCTGATAAGACTCGCCATCAGGTGCGGCAAAAATTTAAATCTGAGGAGAAAAAAAATCCATTGCTAGTCCATGATGCTATATTTCATCGCTCAGGAGATAATTTGTATTTCAAAAAGGTAATTAAGCAGCTCAACATTGAAGATGTTGTGCTGCCAGAGATCAACAATGCACAAAAACAAGATGGCGCATCAAGTGAAAGAGGCCCTGGAAATGAGAATGTACTGGATGATTTCAACGAGGAGGAAAATAGTTCAAATTGGTCGAATGAAGAGCACGGCGGACAGATGGATGATGTGCAAGAAGAGCATGATCTTGGAAATGGTGGTGATGATGATGATCTTGGGGATGTTTTTGATTGGTACTAG
Protein Sequence:
- >Sobic.007G020500.1.p|Sorghum_bicolor|MYB_related|Sobic.007G020500.1.p
MIDDEANFDNMLDAAEEVQATAKFRPKQRPKPQKTALSSRSAAPNPTEETGDGKVGALNQVNSSKELTSQERTSLMCPGSESVDTVAGSQGTLGTPSGDALTVPLGPLAGASAADKISQDGEHNDDPSKLAIHQESSVVSDINVSPNSSCGKAIDDIVEFGDMCDAQVEEERVPKFQPKVQTKLLKETAKSRKTNQKLEASTVDVVTQNGKGNNIETRFRDDQLQDPKSHESVQIPDSEGLLATDNCKSCNLANLVLEESVQEETIAKFHPKLQPEPGKASSKVAVTKNNVAAVAPMEETITGPAAWSPQAVHATVDVDYHNELISPPTDGTQSMVGKVPGREKGKSKSVSFSLSDASGVATPTDTNSEMGNIGKSCSDKLTDENLSNSSQQMTEKHSVTEDQYSNDQDHEGEPLDHTVEQQPNSDVGEIASSMKLRCRKKLQKVGTPNHTVDDCFDEDCVEPSLAEEDNDSGDDYTTGNKRKARKKSRDGVEESQQQKVQKNKSKVSSRGRKRTLKDELAAKPEKKKLTHRIRQRTPKEIKTLLESEEIDPMKLSAAHLRLLQEARERVNPKEIPSGPSSNSRSFGLEDMDDLDYRDEEARFFDNDGTENHVQNTTKLNYQSYMNKPARGKWSKSDTDLFYEGIRQFGSDFAMIQQLFPDKTRHQVRQKFKSEEKKNPLLVHDAIFHRSGDNLYFKKVIKQLNIEDVVLPEINNAQKQDGASSERGPGNENVLDDFNEEENSSNWSNEEHGGQMDDVQEEHDLGNGGDDDDLGDVFDWY*