Information report for Sobic.003G033000.1.p
Gene Details
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Functional Annotation
- Refseq: XP_021312052.1 — protein ALWAYS EARLY 3 isoform X1
- TrEMBL: A0A1B6Q185 — A0A1B6Q185_SORBI; Uncharacterized protein
- STRING: Sb03g003005.1 — (Sorghum bicolor)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi2g05824.3.p
- Hordeum vulgare: MLOC_36343.2, MLOC_36343.1
- Oryza sativa: OsALYL1
- Panicum virgatum: Pavir.5KG052000.1.p, Pavir.5KG052000.2.p, Pavir.5NG035200.1.p
- Setaria italica: Seita.5G136900.3.p, Seita.5G136900.2.p, Seita.5G136900.1.p, Seita.9G308900.2.p, Seita.9G308900.1.p
- Setaria viridis: Sevir.5G135000.2.p, Sevir.5G135000.1.p, Sevir.9G314300.3.p, Sevir.9G314300.1.p
- Zea mays: GRMZM2G395749_P01, GRMZM2G468479_P01
Sequences
CDS Sequence:
- >Sobic.003G033000.1.p|Sorghum_bicolor|MYB_related|Sobic.003G033000.1.p
ATGCGCCGCGTCCCTCTCCCCGAGTTACCACTTCCCCCGACCCTAATTTTCAAACGCGCGAACTCGCGTATGGCCCACCTGTCAGTGCCCCCACCCACCTTCGCAAGCCTGCTCCCACCCGTCTCCTCCTCTCTTCCTCTTCCCTTTTTCTCTACTTGTATCCCCCGCCCGCCAAGCCGCGGCCGCAGCGCAGCAGAAACGCAAACCGGCCACCCCACCCGCACTCGCCGCCCCATCTCCTCCGCTCCCGTCCTCTCCGATCCATCCACGCCACCGGAACCAGCCCCCGAGCAGCACCTTCTCGCCACCGGGCCCCAAGCCTCTGCCGGCGTGGACGCGTGGTTTCGCCTCTGCGGCGGCGGCGCCCGGAGGGAGCGCGGCTCGGGCGTCCGGGAGGCGCCCTCGCGCGCGCGATTTCGTCCAGATCCGACCCAGCAATACTTGTCGAGTCTGAAGTCAAGAACTGTTTTGATGGGCCCAGCGAAGGGTTCTCGAACTATTAACAAGACCATAGTAAAAGGATATGAAGATCAACAGCATCATGATGATCCATCTAGTTCAAGCAAAGCTAAACAGAAAAAGAAGAAAATTTCAGACTTAGATCCCAAATGGAGCAAGGATGAACTTAAAAACTTTTATGAAGCCTACCGTCAACATGGGAAGGACTGGAAAAAGATCAGCATAGCAGTAGGTGGTAAGTCGTCGGACATGGTGCGGTCTCTTTACACTTCACATCGGACTTTCTTATCTCTTCCAGAACGTGAAGCTACTGCCATGGGATTTATTGCGCTGGTGACTGGTCATCACAATGCTTCGCAGGAGAAAACCACGAGTCATAGAGGATATGATCACATAGTGAGAGCATCTGGAAAGGCAAGGAAACATGGAGAACAACAGAAATCAATTGATGGACCTGACCCGCACAACTGTCATGAAGGGAAGATTTCTGGATTTTCAGCTTCCTTCAAAAAACGATACTATGGCGAATTGGTCAGGAACAGCCGAAATCATGCTGTTTGGAGGCGTACTCCTCGTATACCAGTTATAGCTCCTGCAGACAGAAGTACCATTGATGATGCCACACCAGGAATTGAAAACGTCATCAATTCTACCAAGAGAAAATATGAAGCAGCCAATTATGACTGTTCTATTGTTCCAACAAATGAGTACTCTCCGGACAGAGTTTCTGGCTTTGCTGAAGCAAACAAGGTTGGTCTAGATTTTAAGAAAACAAGAATTCAGCAAACTATGGCAGAAGGTCAGACTGGTATAGTTGAGCATGAGATGACAATGGCATCTAAAGAAGGGAATAAACTAGTTGATTCACTAAACAACAACCAGATGCTTATTGATAGTATTTCTGAAGATGATATGTTGGTCTTGGATGTATTGAATAGCCTGGTGAATGCTCCCTCTAAAATGTCAAAACTAGAGATTAATATTCCTTCAGGTTCACTTGGGAAAACTGACTCTGCGCTATCTCACAGAAGGGAGGAAGACCACCCTATCATTGATGTATCTAAACAACGGAAGCCAGTTGGTAAATCCAGTACTTCCAAGACTAGGAAGAAAAAACATAAGAAGATATTAGATGCAGAGGTGCCTGCTGAAGCACAAAACATTTGTGGTAATAATTTAGTCTTGCCGGAAACACTGAGGGTTGGTATCACTGATGATTCTTCCTTGTGTACTGACTCTGGAAGAGTGGGGATACCAGAAGCATCTGAAGATATTTCTGCTGAAGTCCCCAATGCACAAATGGAAACCAAGCCTGAAGTTAGAATGTCTGGAAGGACCAGACGGAAATCTCAATTGCATTGCAAAACAAAGCATATGTCATGCAATGAAGGTTCAGATAATTTGCAGGCAAAGAAATTGCTGCACTGTTTGTCATCTGAACCACTTCGTAGATGGTGCACATATGAGTGGTTCTACAGCGCAGTTGATTATCCATGGTTTTCAAATAATGAGTTTGTGCACTACTTAGATCATGCAAAATTGAGTCATCTTTCAAAGTTGACTAGATCAGAATGGAGTGCAATCAGGAGTTCCCTTGGTAAACCACGGCGATTTTCAAATAATTTTCTGGCTGTGGAAAAAGAAAAACTTGAGGATTATCGTGAGCAAGTTAGAAAAATCTATGCTCAACTCAGTGATGGTTCACGGGATTCTCTACCTGCAGACCTAGCTAGGCCATTTTCAATTGGTCAGCAGGTTATTGTTCGTCATCCAAATTCTAGGGAACTTTGTGATGGCAAAGTGGTGAAGTTGGGGCCGGATTGTTACAAGGTCCATTTTGATGATCCTGACCTTGGTGTTGATATTGTAAAGGACACTGATTGTATGCCAGTTAATTGGCTGTATAATCGTCCTGACAACATGAGAAGGGTCTACCTTTCAAATAATGCGTACAGCATACTGGAGATGGATCACATTCCTGACCTTACACCAAGTGAGAACGGGGACCATGCTGTAAATGGAGCTACTGTACTTGAGGGGCTCAGAAGTCTGCGTTTAACATCAGACATACAGCCTAAGGCAGAATCTATTGTAAATAATGAAAGACCACCATATATGAGTACATCTGATGGCCCTACAAAATCTAGAGATTGCCCTGGTCACAACGATGAGCTAGAGTCATTTGTAGCTGCATTTGTAGAAAGATCACTATCACAAGCCCGGCAGATGTTTGACGAAGAAATGCAGGCAAACTCTGGAAGTAGAGACGATGAAAAGTCATGCATGTCAAATCAAGCGACAGGTTGTGTAGGCCCAGGTTCTGAATCTGCTCGTGGCACACAACTTCCATCTGACCTGATATCAAACTGCGTAGCAACTGCTCTTTCAATCAAGCGCCTTAGCGACTCGTGGCATGAATTTGATAGCATAACAGGCGTCTTGGATCACGCTTTGTCAATGCTGCGGCCAAGCTGTCCAGAGAACCTTGCACTCTACAAACAAATAGAGAGAGACATTGGTATCCTAATGAGCCAGATATTTGCACGTGTGCCAACAGCATTGGGCAATTGCAGCCCTCCTGTCTCGCCCCATGTAACTGGGCCCTGGGCCGGATAG
Protein Sequence:
- >Sobic.003G033000.1.p|Sorghum_bicolor|MYB_related|Sobic.003G033000.1.p
MRRVPLPELPLPPTLIFKRANSRMAHLSVPPPTFASLLPPVSSSLPLPFFSTCIPRPPSRGRSAAETQTGHPTRTRRPISSAPVLSDPSTPPEPAPEQHLLATGPQASAGVDAWFRLCGGGARRERGSGVREAPSRARFRPDPTQQYLSSLKSRTVLMGPAKGSRTINKTIVKGYEDQQHHDDPSSSSKAKQKKKKISDLDPKWSKDELKNFYEAYRQHGKDWKKISIAVGGKSSDMVRSLYTSHRTFLSLPEREATAMGFIALVTGHHNASQEKTTSHRGYDHIVRASGKARKHGEQQKSIDGPDPHNCHEGKISGFSASFKKRYYGELVRNSRNHAVWRRTPRIPVIAPADRSTIDDATPGIENVINSTKRKYEAANYDCSIVPTNEYSPDRVSGFAEANKVGLDFKKTRIQQTMAEGQTGIVEHEMTMASKEGNKLVDSLNNNQMLIDSISEDDMLVLDVLNSLVNAPSKMSKLEINIPSGSLGKTDSALSHRREEDHPIIDVSKQRKPVGKSSTSKTRKKKHKKILDAEVPAEAQNICGNNLVLPETLRVGITDDSSLCTDSGRVGIPEASEDISAEVPNAQMETKPEVRMSGRTRRKSQLHCKTKHMSCNEGSDNLQAKKLLHCLSSEPLRRWCTYEWFYSAVDYPWFSNNEFVHYLDHAKLSHLSKLTRSEWSAIRSSLGKPRRFSNNFLAVEKEKLEDYREQVRKIYAQLSDGSRDSLPADLARPFSIGQQVIVRHPNSRELCDGKVVKLGPDCYKVHFDDPDLGVDIVKDTDCMPVNWLYNRPDNMRRVYLSNNAYSILEMDHIPDLTPSENGDHAVNGATVLEGLRSLRLTSDIQPKAESIVNNERPPYMSTSDGPTKSRDCPGHNDELESFVAAFVERSLSQARQMFDEEMQANSGSRDDEKSCMSNQATGCVGPGSESARGTQLPSDLISNCVATALSIKRLSDSWHEFDSITGVLDHALSMLRPSCPENLALYKQIERDIGILMSQIFARVPTALGNCSPPVSPHVTGPWAG*