Information report for Sobic.001G088100.2.p
Gene Details
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Functional Annotation
- Refseq: XP_002463870.1 — transcriptional adapter ADA2
- Swissprot: Q75LL6 — TADA2_ORYSJ; Transcriptional adapter ADA2
- TrEMBL: C5X0B4 — C5X0B4_SORBI; Transcriptional adapter
- STRING: Sb01g007950.1 — (Sorghum bicolor)
- GO:0006338 — Biological Process — chromatin remodeling
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0009631 — Biological Process — cold acclimation
- GO:0009733 — Biological Process — response to auxin
- GO:0009735 — Biological Process — response to cytokinin
- GO:0035066 — Biological Process — positive regulation of histone acetylation
- GO:0042127 — Biological Process — regulation of cell proliferation
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
- GO:0003682 — Molecular Function — chromatin binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0003713 — Molecular Function — transcription coactivator activity
- GO:0004402 — Molecular Function — histone acetyltransferase activity
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi1g08470.1.p
- Hordeum vulgare: MLOC_34938.1
- Panicum virgatum: Pavir.J402400.1.p, Pavir.3KG525000.1.p, Pavir.2NG209700.1.p, Pavir.9NG099300.1.p
- Setaria italica: Seita.9G090600.1.p
- Setaria viridis: Sevir.9G089100.1.p
- Triticum aestivum: Traes_5DL_2054A21EE.1
- Zea mays: GRMZM2G177974_P01, GRMZM2G129817_P02
Sequences
CDS Sequence:
- >Sobic.001G088100.2.p|Sorghum_bicolor|MYB_related|Sobic.001G088100.2.p
ATGGGGCGGTCGAGAGGGGTGCCGAATTCCGGTGACGATGACACCGGACACAGGTCGAAGCGGAGGAGGGTCTCGGGGTCGGGCGGGGACGCGACGGACTCCATTTCAGCCGCCATCGGGGGAGCTGGAGAGGGAGGGGGCAAGAAGGCGCTCTACCACTGCAACTACTGCAACAAGGACATCTCCGGGAAGATACGGATCAAATGCTCCAAGTGCCCTGACTTCGACCTCTGCGTGGAGTGCTTCTCTGTTGGCGCTGAAGTTACCCCACACCGCAGCAACCATCCATACAGAGTCATGGACAACCTGTCTTTCCCACTTATTTGCCCAGACTGGAATGCAGATGAAGAAATTCTCCTCCTTGAGGGAATTGAAATGTATGGTCTGGGAAACTGGCTTGAAGTGGCAGAACATGTTGGTACCAAGTCTAAGTTACAGTGTATTGATCATTACACAACAGCATACATGAACTCACCTTGTTATCCCCTCCCGGATATGTCTCATGTTAATGGCAAGAACAGGAAGGAGCTTCTAGCTATGGCTAAAGTGCAGGGTGAGAGTAAAAAAGGGACTTCACTGTTATCTGGAGAACTGACTCCTAAGGCTGAATCTCCATTTTCTCCCTCCAGGGTCAAGGTGGAAGATGCACTTGGAGAAGGTCCAGCAGGTCGATCACCTTCACACATAGCTGTTGGTGCAAATAAAAAGGCTTCAAATGTGGGACAGATTAAAGATGGTGCTAATGTGTCAAAAATCGAAGATGGTCATGTCGATAGAAGCGTTGGTGTGAAGAAGCCCAGATATTCTGCAGATGAAGGCCCTTCGTTGACTGAACTGAGTGGATACAATGCAAAGAGACATGAGTTTGACCCAGAGTATGATAATGATGCCGAACAAGCGCTTGCTGAGATGGAATTTAAAGAAACTGATTCGGAAACCGATCGTGAACTGAAACTCCGTGTTCTTCGTATTTATCTGTCCAGGCTTGAAGAAAGAAAAAGGAGAAAGGAGTTCATATTGGAAAGAAATTTATTGTTCCCTAATCCCTTGGAGAAAGATCTTACAAATGAAGACAGGGAAGTTTACCATCGCTATAAGGTCTTCATGCGTTTTCTTTCCAAGGAGGAACATGAAGCCCTCATTAGGAGTGTCATTGAGGAGCGAAAAATTCGGAGGAGAATTCAAGAACTCCAGGAATGTCGCTCTGCTGGGTGCCGCACACTGGCTGAAGCAAAGATACACATAGAACAAAAGAGGAAAAAAGAATACGAGCTGAATGCCCAAAAAGCTAAGGAGAGCAGCCTTATTGCAAATAATAAATCGGTACAGAAGATGAATCGATCTATGAAAATTGAGTCTGATGGGAATTTGGATCCAAAGAAAGGTGGTGCTGGCTTGGATTCTCCTAAAACTACAGGACTTACAAGTGTTAAGCAGTGGGATGACTGGGATATAGTTGGTCTTCCTGGGGCAGAGCTATTAAGTGCTAGCGAAAAGCTTCTATGTTGTCAGAACAGATTGCTACCTAGTCATTACCTTAGAATGCAGGAGGTGTTGATGCAGGAGATATTCAAGGGTAGTGTCTTAAAGAAGGAAGATGCCCATGTCTTATTTAAGGTTGATCCTACCAAAGTAGATAGTGTTTATGATATGGTAACGAAAAAGCTGGGCAACCATGAGGAGGCTCCAACTGTCTAG
Protein Sequence:
- >Sobic.001G088100.2.p|Sorghum_bicolor|MYB_related|Sobic.001G088100.2.p
MGRSRGVPNSGDDDTGHRSKRRRVSGSGGDATDSISAAIGGAGEGGGKKALYHCNYCNKDISGKIRIKCSKCPDFDLCVECFSVGAEVTPHRSNHPYRVMDNLSFPLICPDWNADEEILLLEGIEMYGLGNWLEVAEHVGTKSKLQCIDHYTTAYMNSPCYPLPDMSHVNGKNRKELLAMAKVQGESKKGTSLLSGELTPKAESPFSPSRVKVEDALGEGPAGRSPSHIAVGANKKASNVGQIKDGANVSKIEDGHVDRSVGVKKPRYSADEGPSLTELSGYNAKRHEFDPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLEERKRRKEFILERNLLFPNPLEKDLTNEDREVYHRYKVFMRFLSKEEHEALIRSVIEERKIRRRIQELQECRSAGCRTLAEAKIHIEQKRKKEYELNAQKAKESSLIANNKSVQKMNRSMKIESDGNLDPKKGGAGLDSPKTTGLTSVKQWDDWDIVGLPGAELLSASEKLLCCQNRLLPSHYLRMQEVLMQEIFKGSVLKKEDAHVLFKVDPTKVDSVYDMVTKKLGNHEEAPTV*