Information report for Sme2.5_00062.1_g00018.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_015166261.1 — PREDICTED: telomere repeat-binding factor 1-like isoform X1
- Refseq: XP_015166262.1 — PREDICTED: telomere repeat-binding factor 1-like isoform X1
- Refseq: XP_015166263.1 — PREDICTED: telomere repeat-binding factor 1-like isoform X1
- Refseq: XP_015166264.1 — PREDICTED: telomere repeat-binding factor 1-like isoform X1
- Swissprot: Q8VWK4 — TRB1_ARATH; Telomere repeat-binding factor 1
- TrEMBL: M1C4E1 — M1C4E1_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400059543 — (Solanum tuberosum)
- GO:0006334 — Biological Process — nucleosome assembly
- GO:0006357 — Biological Process — regulation of transcription from RNA polymerase II promoter
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0000786 — Cellular Component — nucleosome
- GO:0005730 — Cellular Component — nucleolus
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0033613 — Molecular Function — activating transcription factor binding
- GO:0042803 — Molecular Function — protein homodimerization activity
- GO:0070491 — Molecular Function — repressing transcription factor binding
- GO:1990841 — Molecular Function — promoter-specific chromatin binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Sme2.5_00062.1_g00018.1|Solanum_melongena|MYB_related|Sme2.5_00062.1_g00018.1
ATGGGATTTTGGTTGGCATGGGTGGCGGATTTTCTGAGTTTTTTTTGGGGCTGGTTGTTGGAGATGAGAGAAGGTGACGCTGGCAGCCATGGTAATGGTCGTTGGTGGCTGTTTCAGGTTGTTCTCATGGGTGCACCTAAGCAGAAGTGGACTTCTGAAGAAGAAGCTGCTCTTAAAGCTGGGATACTTAAGCACGGCCCAGGGAAATGGCGCACCATTCTCAAGGATCCAGAATTTAGTGGAGTATTGTGTTTGCGTTCAAATGTAGATCTCAAGGACAAGTGGAGGAACATGACTGTGATGGCAAATGGTTGGGGTTCGCGAGAGCAATCAAGATTGGCTGTCAAAAAGATGAAACAGACCCCTAAACAGGATGAGAGTCTTGTGACTGATATGACTGCTGCTGAAAGTGACGAGGAAGCTGCTGAAGCCAGGCCTATCACAACTTCTAGTGGTTCTCCTCAGATACATGGTTCAAAAAGATCTATGATAAGGTTGGATAATCTTATAATGGAGGCTATAAGCAGCTTGAAAGAGCCAGGTGGTTCCAACAAGACTACAATAGCTGAATACATAGAGGACCAATGCTGGGCACCTCCAAACTTTAAAAGGCTACTGTCAGGGAAACTGAAGTATTTAACTGCAACAGGGAAACTTATCAAGATGAAGCGTAAGTATAGAATAGTACCTATGTCAACACCATCTGACAGTAGAACAAACCTGTCCATTACACTTTTGGACAGCAGGCAGAGGATCTTCTCCAAGATTAATCGGGATGATATGAACATGCTTAGTACATCTCGGATAGATTTAGAGCTAGCTAAAATGAGGAACATGACACCACAAGAGGCTGCAGCTGCTGCTGCACAAGCAGTTGCTGAAGCAGAAGAAGCCATAGCTGAAGCTGAGGAAGCAGGTAGGGAGGCTGAGGCTGCTGAAGCTGATGCTGAAGCTGCACAAGCCTTTTCAGTAGCTGCAAAGAAGACACTACATGGAAGAAGTGCCCCAAGGATGGTAGGACATCCTTTTATGCCAATTATTTTGTCAGTGTCTATCATTTTCCTTGTCTCTCTTCCTATTCTTTGTTTTACTGTTCTTAGGATATGTTCTTCCTTATGTGTGGAACCATTATTGATTCAGTCTAAAATCGTTTTTGTTGGGGGTGAGGGTGGTGTGAGGATGGGAGTTTCACCTCATTCCGAGTTTGGAGTAAGAAGTTATGCCCTTTTTCGTAGAACCTATTTGGGTTGGGACAGTGTGCCTTCACAAACTGTGAAGAGCTTCACGACCCGTGAAGCCAATCGTGACAACGGAGAGCCTTCACGGACCATGAAGAGCTTCACGACCCGTGAAGCCAGCCGTGTCAAGTTCTGGATTAAAATTAAAGAGGCATTTTATTGA
Protein Sequence:
- >Sme2.5_00062.1_g00018.1|Solanum_melongena|MYB_related|Sme2.5_00062.1_g00018.1
MGFWLAWVADFLSFFWGWLLEMREGDAGSHGNGRWWLFQVVLMGAPKQKWTSEEEAALKAGILKHGPGKWRTILKDPEFSGVLCLRSNVDLKDKWRNMTVMANGWGSREQSRLAVKKMKQTPKQDESLVTDMTAAESDEEAAEARPITTSSGSPQIHGSKRSMIRLDNLIMEAISSLKEPGGSNKTTIAEYIEDQCWAPPNFKRLLSGKLKYLTATGKLIKMKRKYRIVPMSTPSDSRTNLSITLLDSRQRIFSKINRDDMNMLSTSRIDLELAKMRNMTPQEAAAAAAQAVAEAEEAIAEAEEAGREAEAAEADAEAAQAFSVAAKKTLHGRSAPRMVGHPFMPIILSVSIIFLVSLPILCFTVLRICSSLCVEPLLIQSKIVFVGGEGGVRMGVSPHSEFGVRSYALFRRTYLGWDSVPSQTVKSFTTREANRDNGEPSRTMKSFTTREASRVKFWIKIKEAFY