Information report for Sevir.9G314300.3.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_022678605.1 — protein ALWAYS EARLY 1 isoform X1
- Refseq: XP_022678606.1 — protein ALWAYS EARLY 1 isoform X1
- TrEMBL: A0A368SMP2 — A0A368SMP2_SETIT; Uncharacterized protein
- STRING: Si034207m — (Setaria italica)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Oryza sativa: OsALYL1
- Panicum virgatum: Pavir.5KG052000.1.p, Pavir.5KG052000.2.p, Pavir.5NG035200.1.p
- Setaria italica: Seita.9G308900.2.p, Seita.9G308900.1.p, Seita.5G136900.3.p, Seita.5G136900.2.p, Seita.5G136900.1.p
- Zea mays: GRMZM2G395749_P01, GRMZM2G468479_P01
Sequences
CDS Sequence:
- >Sevir.9G314300.3.p|Setaria_viridis|MYB_related|Sevir.9G314300.3.p
ATGGGTCCGGCAAAAGTTTCTCGAACAATTACCAAGATCAGAATAAAAGGATATGAGGATCGACAGCAGCACGAGGAGGTACCTAGTTCAGTCAAGAAGGAGAAAATCTCAGATTTAGGTCCCATATGGACCAACGATGAGCTTATGTGCTTCTATAAAGCCTACCATCGACATGGAAAAGACTGGAAAAAGATCAGTGCAGCGGTCGGTCATAAATCACCAGACATGGTAAAAGCTCTCTATGCTATGCATCGGACTTTCTTATCTCTTCCAGAGCATCAAGCTACTTCCATGGGATTTATTGCATTAGTGACTGGTCATTGCAATGTTTTGGAATTATCCTCAAGTCATAGAGGAAATGGACAAACAATTAGAGCATCTGGGAAGGCAAAGAAACATGGAGAAGCTACTCAGCATAAAGTACATGAAGCACCTCACCCTCATGGCTCCTATCACGCAGGGAAAATTCCTGGATTTTCACCTTCCTTTAAGAAAAGATACTATGGAGAACTGGCTAGGAACAGTCAAAGTCATCCTGTTGGGAATCGTACCCCTCGGATACCGGTTATAGTTCCTGCAGACAGGAATGCTATTAATGATGCCACACCAGAATTTAAAAACGCCATGAGTTCTACAAAAAGGAATAATGACAAGATTAATAATGACCGTGCTAATTTTTCGATGAACGAGTGCTCTCCTGATGGAAGATCTGGAATCATGGAAGCAACTAAAGGTGTTGAATGCCAAGCTCTCTTGGAGACCAATGGAGACACTGAGATATGTCAGACTCAGCAACCTCTGAAAAAAAGAAGAATGGACCAAACAATGGACAGAGGCCGGGCCAGTAAAGTTGGGCATGAAACTATGATGGAGGTTAAAGAAGAGAACAAACCTTCTGGATTACTCAAGCAACAGATGTCTAGTATGTTTATTTCTGCAGATGATATTTTGATCTTAGACGTGTTGCAGAGTCTGGTGGATGAACCTGATAAGATGTCAAAACTCAAGATTAATATTACTTCAAATACACTTAGAAAAAGTGACTTTACATTATCTGAGAGCAAGGATGAAGGGCATTCTCCTGTTGATCTATCTAAACAAGGGAAGCCAATTACTGAATGCAGTGCTTCCAAGACCAAGCGGAAAAGGCATACCAAGGTGCCCGCTGAAGAAATAAATGTTGTGCATGCTATTGATATCACTGAGGGTTCCTCAAATTCTGACTCTGCAAGAGGATTAGAGGATTTACCGGAATCAACTGCAAATATTTTCTGTGAAGTGTACCCCACTGTACCAAGGGAAATCAACCCTGAAATAAGTATGTCAAGGAGAAGGAAAATGAAAAACAAAATGCATAGAAAAAAGAAGTATGTGATGTGCAATGAAGGTTCAGATAATGTAGAGGCAAGAAAATTACTGCACTGTTTGTCATCTGAATTTCTTCGCAGATGGTGTACATATGAGTGGTTCTACAGCGCAATTGATTTTCCTTGGTTTATGGATAATGAGTTTGCGAAGTACATGAATCATCCATATTTGAGGCATATTTCACGGTTGGCTAGATCCGAGTGGAGCATAATACGAAGCTATCGTGGCAAGCCCCGGCGCTTTTCTGATAATTTTCTGGTGGTGGAAAGAAAACAACTCGAGGATTATCGCAAAGAAGTTAGGACATACTATGCTCAACTAAGTGATGGTTCGCTAGATTCTCTACCAGCAGACGTAGCTCGGCCATTTTCAATTGGTCAGCAGGTCATTGTTCGCCACCCAAGTTCTAGGGAACTTTGTGATGGTAAAGTGGTGATGGTGGATCAGGATTGCTGCAAGGTTCAGTTTGATAACCCTGAACTTGGTCTTGATCTAGTACAGGACGTTGATTGTATGCCTGTGAATTGGCTAGATAATCTTCCTGATAATGTCAGGAGCACATTGGATTCACATGATGTTCACAACATACTGGAGATGGAGCACGTTTTCAAGGTTACACCAAGTGGTAACAGAGATCATACCATTAATGAAGTTTCTATACCTGAACTGCCTATTAGTGTGGACATTACATCAGATGAACAGCTTGAGGTCGAATACTCTGTAGACAGTGAAAGGACACAAAAAGAGAGTACTTCTGATGGTATTGTACAATCTACAGATTTCCCAAACAACAATGATGATCATTACGATCAATTAGAGTCGTACTGTTCTGCATTCGTCCGAAGCATGCAATCACAAGCTAGGGAGATGGTAGATGAAGTTATGCAGGCAACATCTGGAGGTAACAGTTCTCAAGATGAAGGAGCAGGCGCAGTTAATCAAGCAACTAATTGTATAAGCCCTGATCTTGGGGCTGTTACTTGTGATTCCCAGCTTCCATCAAACCTGATTATGAACTGCACTGCCACGGTTCTTGCAATCAAGCGCCTTGCCGACTCACGGCACCCACCTGCAAACATAGCAGGCATCCTGCAGCGTTTCTCCGCAATGCTGCTCCCTACCTGTTCAGAGAACCTCGCGATCTACAGAGACATAGAGAAACATATTTCGATCATAACGAGCCAGACAGTGGCACTTATGCCCAGGACATTGTAA
Protein Sequence:
- >Sevir.9G314300.3.p|Setaria_viridis|MYB_related|Sevir.9G314300.3.p
MGPAKVSRTITKIRIKGYEDRQQHEEVPSSVKKEKISDLGPIWTNDELMCFYKAYHRHGKDWKKISAAVGHKSPDMVKALYAMHRTFLSLPEHQATSMGFIALVTGHCNVLELSSSHRGNGQTIRASGKAKKHGEATQHKVHEAPHPHGSYHAGKIPGFSPSFKKRYYGELARNSQSHPVGNRTPRIPVIVPADRNAINDATPEFKNAMSSTKRNNDKINNDRANFSMNECSPDGRSGIMEATKGVECQALLETNGDTEICQTQQPLKKRRMDQTMDRGRASKVGHETMMEVKEENKPSGLLKQQMSSMFISADDILILDVLQSLVDEPDKMSKLKINITSNTLRKSDFTLSESKDEGHSPVDLSKQGKPITECSASKTKRKRHTKVPAEEINVVHAIDITEGSSNSDSARGLEDLPESTANIFCEVYPTVPREINPEISMSRRRKMKNKMHRKKKYVMCNEGSDNVEARKLLHCLSSEFLRRWCTYEWFYSAIDFPWFMDNEFAKYMNHPYLRHISRLARSEWSIIRSYRGKPRRFSDNFLVVERKQLEDYRKEVRTYYAQLSDGSLDSLPADVARPFSIGQQVIVRHPSSRELCDGKVVMVDQDCCKVQFDNPELGLDLVQDVDCMPVNWLDNLPDNVRSTLDSHDVHNILEMEHVFKVTPSGNRDHTINEVSIPELPISVDITSDEQLEVEYSVDSERTQKESTSDGIVQSTDFPNNNDDHYDQLESYCSAFVRSMQSQAREMVDEVMQATSGGNSSQDEGAGAVNQATNCISPDLGAVTCDSQLPSNLIMNCTATVLAIKRLADSRHPPANIAGILQRFSAMLLPTCSENLAIYRDIEKHISIITSQTVALMPRTL*