Information report for Sevir.5G474900.1.p
Gene Details
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Functional Annotation
- Refseq: XP_012701182.1 — telomere-binding protein 1 isoform X1
- Refseq: XP_022682806.1 — telomere-binding protein 1 isoform X1
- Swissprot: Q9LL45 — TBP1_ORYSJ; Telomere-binding protein 1
- TrEMBL: K3XFC2 — K3XFC2_SETIT; Uncharacterized protein
- STRING: Si000591m — (Setaria italica)
- GO:0032204 — Biological Process — regulation of telomere maintenance
- GO:0042162 — Molecular Function — telomeric DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g55430.3.p, Bradi3g55430.2.p, Bradi3g55430.5.p, Bradi3g55430.4.p
- Hordeum vulgare: MLOC_53202.1
- Oryza sativa: RTBP1
- Panicum virgatum: Pavir.5KG779600.1.p
- Setaria italica: Seita.5G468700.5.p, Seita.5G468700.3.p, Seita.5G468700.1.p, Seita.5G468700.6.p, Seita.5G468700.4.p, Seita.5G468700.2.p, Seita.7G135900.1.p
- Triticum aestivum: Traes_6AL_E94233A40.1
Sequences
CDS Sequence:
- >Sevir.5G474900.1.p|Setaria_viridis|MYB_related|Sevir.5G474900.1.p
ATGGTGTCACAGAAGAGGTTGGGCTATGGATCCCGTGGCCGCCAAATTCCAGCTATGCCACGTGTTCCAAACTCAGTTCGGGGAAAACGCACGACGAGAAGAAAGAAAAATGAGATGTGTGCATTTGATTTGCTTGCGAGCGTCGCCGGGACGCTATTAACAGATCAGGACAGTTCATCTTATGTTCCTAATACTAGCGTAGCAGCAACAAGTTATGCCAGAAATAGGAAATCAGTTAAAGAAGAATACTTTGATGAAATTTTGCACCTGAAAAATGTGGCTGTGAAGAAAGACTGTGGCAGTGGGTGTGTAGTGGGCTCAGGTGGTGTCTCTGCCTTACCTAGGAAAGGTAATGACGGCCTGGCTGAAAACTCATTGACAAGAAATGAAGATGAATCAGTACTAAAGTCACTAACAGTGAAATCAAATATGCTAGCTAGGGACTCATCAGTTAGATGTACAAGGCCATGTGAAATTAGTCGTGGTCTTGGCATAATTTGTGAGTATGGAGCTTTTGGAGTATTCCATCCAGGATCCTCAAGCTCAGCAGAGGCTGGACAAGCGCATCAAGCTGAACCCAAAGTGATCAGAAGCAAAGCAGACGGGCATACTGCAGCCCTTGACAGCTTGTTTGACTCTGTGGATCTGGATGGCAGACCTCCTGCTTTGGTTAGTTCTGACAGTAGCTCAGGTGTGCTTTTGTGCAGCCATGACAAGGAACATAAAGCCGCTTCCTTGTGCCAGGTTGAAATGCAGCATACTGCAGATAGAGATGATGACGAAAATTCTTCTGGGTGCACACATCCAAGCACCACAGGAAATGAGGGTTACAAACCACATTTTCTAGGTAACCATAGGATCAGGAAATTGCTTGCCTCAAAGGTAAGGAAGGCAGCACGTAATAAGACTTCTGGAGGGATGTCCAGCAAAGGCAGCAAGCTAAACTTCTGCGGGAAAAAGATACCCACCACACGTCAAAAGGTGCAAAGGACAAATTTCAAGAGGAAAAAGCTAGCACGAGGTACAACGCCATTTGCTAAAGGGATGCTAACTGGAGCCACCGGGACATCATTCCGTATGCAAGGTCAAAATAAATCATGTGGATCTGAGGACTACCATGTTAAGCTAAGGATCAAGTCATTTAACATCCCAGAATTATTTGTTGAGATCCCTGAAACTGCAACAATTGGTTCATTGAAGAGAACCGTGATGGATGTTGTCACTAGTATAATGGAAGGTGGCCTACGTGTTGGTGTTCTTCTTCAAGGAAAGAGTATCCAAGATGACAGCAAGACACTACGTCAAGCTGGTATATGCCATGGTGAAAAACTAAATAACATAGACTTCACACTGGAATGTGAACGTCAGCAAGATTCTCCCTCTGGAGTCATAATAGCAGAAGAGATGGATTTTGTCAGTGCAGATATTGTGGAACCATTAGCTAGGATGAAGTATGAAGAGCCATTTCCTGGAACTAAAGGCGGTGGGGGCAACCAGCAGCCTATAAAGGCGTATCCAAATGACTCTTTCGCTGGTTGTGTTCATCGTCCTGTTGAAATGGCCTCACAAGATGCATCAGCAAGCTTGCAAGCCATAATCCCTGTTGCAGCTTCAGACTTGAACGCACTAGCCATTGTGCCTATTTGCAAGACCAGACGATCTGAATTTGGGCAAAGGCGTACAAGGATGCCCTTCTCTGTTGGTGAGGTTGAGGCACTGGTGGAAGCTGTGGAACAGCTTGGGACCGGAAGGTGGAGAGATGTTAAAATGCACGCATTTGACGGTGCTGATCACAGGACATATGTTGACCTTAAGGACAAGTGGAAGACCCTGGTGCACACAGCAAGCATATCCCCACAACAGCGAAGAGGCGAGCCAGTTCCGCAAGAACTACTGGACCGTGTGCTCTCAGCGCAGGCCTACTGGTCCCAGCAGCAGGCAAAGCTTCATGGCAAGGCTCCTCTTCCTGAGATTTGCCTTGCCTAG
Protein Sequence:
- >Sevir.5G474900.1.p|Setaria_viridis|MYB_related|Sevir.5G474900.1.p
MVSQKRLGYGSRGRQIPAMPRVPNSVRGKRTTRRKKNEMCAFDLLASVAGTLLTDQDSSSYVPNTSVAATSYARNRKSVKEEYFDEILHLKNVAVKKDCGSGCVVGSGGVSALPRKGNDGLAENSLTRNEDESVLKSLTVKSNMLARDSSVRCTRPCEISRGLGIICEYGAFGVFHPGSSSSAEAGQAHQAEPKVIRSKADGHTAALDSLFDSVDLDGRPPALVSSDSSSGVLLCSHDKEHKAASLCQVEMQHTADRDDDENSSGCTHPSTTGNEGYKPHFLGNHRIRKLLASKVRKAARNKTSGGMSSKGSKLNFCGKKIPTTRQKVQRTNFKRKKLARGTTPFAKGMLTGATGTSFRMQGQNKSCGSEDYHVKLRIKSFNIPELFVEIPETATIGSLKRTVMDVVTSIMEGGLRVGVLLQGKSIQDDSKTLRQAGICHGEKLNNIDFTLECERQQDSPSGVIIAEEMDFVSADIVEPLARMKYEEPFPGTKGGGGNQQPIKAYPNDSFAGCVHRPVEMASQDASASLQAIIPVAASDLNALAIVPICKTRRSEFGQRRTRMPFSVGEVEALVEAVEQLGTGRWRDVKMHAFDGADHRTYVDLKDKWKTLVHTASISPQQRRGEPVPQELLDRVLSAQAYWSQQQAKLHGKAPLPEICLA*