Information report for Seita.5G136900.3.p
Gene Details
|
|
Functional Annotation
- Refseq: XP_004968511.1 — protein ALWAYS EARLY 2
- TrEMBL: K3XEE3 — K3XEE3_SETIT; Uncharacterized protein
- STRING: Si000260m — (Setaria italica)
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Seita.5G136900.3.p|Setaria_italica|MYB_related|Seita.5G136900.3.p
ATGGCCCCGGCAAAAGGTTCTCGGACTATTAGCAAGACCATAATAAAAGGATATGAGGATCAGCAGCAGCACGATGGTCCACCTAGTTCAAGCAAAGCTAAACAAAAAAAGAGGAAAATTTCAGACTTAGATCCTGAATGGAGCAAGGATGAACTTACATGCTTTTATGAAGCCTACCGCCGACACGGAAAAGACTGGAAGAAGATCAGCTTAGCGGTAGGCGGTAAATCGTCAGACATGGTGCGATCTCTTTACAGTGTTCATCGGACTTTCTTATCTCTTCCTGAACGTCAAGCCACTGCCATGGGATTTATTGCGTTGGTGACTGGTCATCGCAATGCTTCAGACAAATCCAGAAATCTTATAGGAGATGATCAAATGGTCAGAGCATCTGGGAAGGCAAGGAGACGTGGTGAAGCTACACAACAGAAGACAACTGAAAGGCATGACCTGCACGACTGTCATGAAGGGACAATTTTGGGATTTTCATCTTCCTTTAGAAAACGATACTATGGAGAATTTGTGAGGAATGGCCGAAACCATGCTGTTCGAAGGCGTACTCCTCGTATACCGGTCATAGCTCCTGCAGACAGGAATACCATTGATGAGGACACACCAGGAACTGAAAACATCATCAATACTACCAAGAGAAAATATGAAGCGGCCAATAAAGATTGTGCTATTGTCCCAACGAATGACTGCTCTCCAGACAGAAGTTCTGGAATCACTGAAACAAATAAGGCTGGTCAAGGTCATACATTCTTGGAGACCAAGGGAACTGGAGACACAGTGATATGTCAGCAACAGTTAAAAAAAGCAAGAATCCAGCAACCTAAGGAGGAAGGCCAGACCGGTAAAGTGAAGAATGAGACAGTCATGGCATCTGATGAAGGGAATAAGCTTGTTGATTCACTCAAGCCCCATGATATGCTTAGCAACATTATTTCTGAAGATGATATGTTGGTCTTAGATGTACTGAATAGTTTGGTGAATGCACCTTCTAAAACGTCAAAACTCGAGATGAATGCTCCTTCAGGTTCTCACGGAAAAACTGACTCTGCATTATCTGATAGAAGGGAGGAAGGCCACCCTACCATTGATCTATCTAAACAAGGGAAGCCAGTTGGTAAATCCAGTGCTTCCAAGACTAGGAAGAAAATGCGTAAGAAGCTATTAGGTGCAGAGGTGCTTGCTGAAGCACAAAACATTTCTGTTACTAATTTAGTTCTGCCAGAAGCACAGAAGGTTGGTATCACTGATGATTCCTCCTTGCGTACTGATTCTGCAAGTGTGGGGATACCTGAAGCATCTGAAGATATTTCCGCTAAAGTCCCCAGTGCAACATTAGAAATCAAGCCTGAAATTAGAATGTCTAGAAGGACCAGAAGGAAACACCAAATGCATTGCAAAACGAAGCACATGTCATGCAATGAAGATTCAGATAATTTACAGGCAAAGAAATTGTTGCACTGTCTGTCATCTGAATCGCTTCGTAGATGGTGCACGTACGAGTGGTTCTACAGTGCAGTTGATTATCCATGGTTTTCAAATAATGAGTTTGTGCACTACTTAGATCATGCAAAATTAAGTCATCTGTCCAGGTTGACTAGATCAGAGTGGAGCGCAATTCGAAGTTCCCTTGGTAAACCTCGGCGCTTTTCGGATAATTTTCTGGCTGTGGAAAAAGAAAAACTTGAGGATTATCGGGAGAAAGTTAGGAAAATCTATGCTCAACTCCGTGATGGTTCACGGGATTCTCTACCGGCAGACCTAGCTCGGCCATTTTCAATTGGTCAGGAGGTCATTGTCCGTCATCCAAGTTCTAGAGAACTTTGTGATGGCAAAGTGGTGATGATGGGGCCAGATTGTTACAAGGTCCATTTTATTAACCCCGACCTTGGTGTTAATATTGTAAAGGACACTGATTGTATGCCAGTTAATTGGTTGTATAATCGTCCCGACAACATGAGAAGGAGCTACCTTTCAAATAATGTGTACAACATCCTGGAGACAGAGCACATTCCTGACCTTACACCAAGTGAGAACTGGGACCGTGCCGTAAATGGAGTTACTGTACCTGAGCAGCCCAAAAGTCTGCGCTTAACATCAGATAAACAGCTTAAGGTTGAATCTGTTGTAAATGGTGAAAGGTTGTCTACGTCCGATGGCCCTACAAAATCTAGAGGTGGCCCAGACAACACTGCTGGTCACAACGATGAGCTAGAGTCATATATAGCTGCCTTTGTACAAAGATCGCTTTCCCAAGCCAGGCAGATGGTTGACAAAGCCATGAAGGCAAACTCTGAAGGCAGTGATGAAAGGGTATGGGCGTCAAACCAAGCGACAGATTCTGTAGGCCCTGAATCTGAATCTGTGGTTTGTGGTGCCCAACTTCCATCCAACCTGATATCAAATTGCATTGCGACAGTTCTTTCAATCAAGCACCTTAGTGACTCGCGGCATCCACCTGCTAACATAGCAGGTGTCTTGGAGCGTGTTTCCACAATGCTGCGCCCAAGCTGTCCAGAGAACCTTGCAATCTACAAAGACATAGAGACTTATCTCTCCATCATTGCAAACCAGATACTTGCGCTTGTGCCTACAGCGTTGGGCAATTGTGGGCCTCCCATGTCGCCCATGTAA
Protein Sequence:
- >Seita.5G136900.3.p|Setaria_italica|MYB_related|Seita.5G136900.3.p
MAPAKGSRTISKTIIKGYEDQQQHDGPPSSSKAKQKKRKISDLDPEWSKDELTCFYEAYRRHGKDWKKISLAVGGKSSDMVRSLYSVHRTFLSLPERQATAMGFIALVTGHRNASDKSRNLIGDDQMVRASGKARRRGEATQQKTTERHDLHDCHEGTILGFSSSFRKRYYGEFVRNGRNHAVRRRTPRIPVIAPADRNTIDEDTPGTENIINTTKRKYEAANKDCAIVPTNDCSPDRSSGITETNKAGQGHTFLETKGTGDTVICQQQLKKARIQQPKEEGQTGKVKNETVMASDEGNKLVDSLKPHDMLSNIISEDDMLVLDVLNSLVNAPSKTSKLEMNAPSGSHGKTDSALSDRREEGHPTIDLSKQGKPVGKSSASKTRKKMRKKLLGAEVLAEAQNISVTNLVLPEAQKVGITDDSSLRTDSASVGIPEASEDISAKVPSATLEIKPEIRMSRRTRRKHQMHCKTKHMSCNEDSDNLQAKKLLHCLSSESLRRWCTYEWFYSAVDYPWFSNNEFVHYLDHAKLSHLSRLTRSEWSAIRSSLGKPRRFSDNFLAVEKEKLEDYREKVRKIYAQLRDGSRDSLPADLARPFSIGQEVIVRHPSSRELCDGKVVMMGPDCYKVHFINPDLGVNIVKDTDCMPVNWLYNRPDNMRRSYLSNNVYNILETEHIPDLTPSENWDRAVNGVTVPEQPKSLRLTSDKQLKVESVVNGERLSTSDGPTKSRGGPDNTAGHNDELESYIAAFVQRSLSQARQMVDKAMKANSEGSDERVWASNQATDSVGPESESVVCGAQLPSNLISNCIATVLSIKHLSDSRHPPANIAGVLERVSTMLRPSCPENLAIYKDIETYLSIIANQILALVPTALGNCGPPMSPM*