Information report for SapurV1A.0162s0390.3.p
Gene Details
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Functional Annotation
- Refseq: XP_024441064.1 — protein LHY isoform X1
- Refseq: XP_024441065.1 — protein LHY isoform X1
- Refseq: XP_024441066.1 — protein LHY isoform X1
- TrEMBL: A9PI51 — A9PI51_POPTR; Uncharacterized protein
- STRING: POPTR_0014s10260.1 — (Populus trichocarpa)
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043433 — Biological Process — negative regulation of sequence-specific DNA binding transcription factor activity
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Manihot esculenta: Manes.01G239000.2.p, Manes.01G239000.1.p, MANES_01G239000
- Populus trichocarpa: Potri.014G106800.9, Potri.014G106800.8, Potri.014G106800.7, Potri.014G106800.5, Potri.014G106800.3, Potri.014G106800.10, POPTR_014G106800v3, Potri.014G106800.6, Potri.014G106800.4, Potri.014G106800.2, Potri.014G106800.1, Potri.002G180800.5, Potri.002G180800.4, Potri.002G180800.3, Potri.002G180800.1, POPTR_002G180800v3
- Ricinus communis: 30076.m004464
- Ziziphus jujuba: XP_015888949.1
Sequences
CDS Sequence:
- >SapurV1A.0162s0390.3.p|Salix_purpurea|MYB_related|SapurV1A.0162s0390.3.p
ATGGAAATATTCTCTTCTGGGGAAGACTTGGTTATTAAGACAAGGAAGCCATATACAATTACCAAGCAACGGGAAAGATGGACAGAGGAGGAGCATAGCAGGTTCCTGGAGGCCTTGAAGCTCTATGGTCGAGCTTGGCAGCGAATTGAAGAACATATTGGTACAAAGACTGCCGTTCAGATCAGAAGTCATGCACAGAAGTTCTTTTCAAAGTTGGAAAAGGAGGCTGTTGTTAAAGGTGTTTCAATAGGACAAGCACTTGACATAGAAATTCCACCACCACGTCCCAAAAAGAAACCAAGCAATCCTTATCCTCGAAAGATAGGCGTGGGTCCTCCAGCATCACAGGTGGGTGCAAAGGATGGAAAGCTTTTAACTTCAGCTTCTTTTCCACGTTGTAAGCAAGTTTTAGGTTTGGAGAAAGAACCACTTCCTGAGAAAATTAATGGAGATGAGAGGCCAACCAATGCTAAGGATAATCAGGATGACAATTCCTCGGAAGTATTTCCCCTTCTCCAAGAACCTCACTATTCTTCTGTATCTTCAGTCAACAAGAATCCTGTACCAACGCTAGAGATTCTCAAAAAGACTAGCCCTTTCAGGGAGTTTGTATCTTCAGCAAAGGAGGGAAATCATGATGCAAGTAATCAATCCTTTGTCACCGTTGAGCTTGGTGCAAATCAAAAGTTGGACAACTCTGATGTCAAACAGACAGTTCAAGATAGCAACACTAGTGAGTTCTCAAAATCAGAAAACTTCAACTCTTTTTCTGAGAACTTGTTTCAGCAAAAGAAATCAGATGATTTTATTGGAGCATTGCGAACAGATGGGATGCAAACCATGCAGAACTATCCAAGGCATGTCCCTGTGCACGTTCTAGACGGGAGCCTAGGAACATGTATGCAAACTCCTCCCTCAGATTTTTCGTTTCAGGACTCCATGTTTCATCCAATAGGAGAAATTCCAGCATGTCCTAATTTGTACCCACATTCTGCTGCATCCAAAACCACTGACCATCCAAATCTTTCACCAAGACCCTCTACACATCAATCATTTCCAAGTTTTCCTCCATTTACCCCAACTCATCATAATCAAGAAGACTACAAATCTTTTCTCCACATATCCTCCACATTTTCAAGTCTTATTGTATCTACTCTGCTACAAAACCCGGCAGCCCATGCTGCAGCAAGCTTTTCAGCTACCTTTTGGCCCTATGGAAATGTGGAGAGTTCTGTGGATTCTCCGGCATGTGCCCAAGGAGGTTTCCAATCCAGGCAATTGAACTCTGCTCCTAGTATGGCAGCTATTGCTGCTGCTACAGTAGCAGCGGCAACCGCATGGTGGGCAACAAATGGCCTACTTCCCATGTGTGCTCCTCTCCATACTGACTTTCCCTGCCCTCCTGCAACTGCAATTCAGTCTGTGGATACTGGTGAAGTCTCTGCAACAAAGACAGAAAGGAAGGAAACAACTGAAAATCCTGTACAGGACCCAGAGCATACTGAAGCTGTGCAAGCTCAAAACGCATCTAAATCACCAAAGATAACATCATCAGACTGTGAAGAGAGTGGAGGCTCGAGGCTAAATACTGTACCTGAAGTTGTCGATCTTGAGTTGACTACAACACCTCACGAGGTCCAGGATTCAAGCAAAACAAAGAGCAGAAAACAGATTGACCGTTCTTCATGTGGTTCAAACACACCCTCTAGCAGTGAAATAGAGACAGATGCATTGAAGAAGGTTGAGAAAGGCACTGAAGAGCCAAAAGAAGATGATGCAAATCATCCAGCTTCCGAGTCTAGCTCTCACCGCTGCAGAAGCAGTAGCAGCACGAGTGATTCATGGAAAGCGGTCTCTGAAGAGGGGCGGCTGGCATTTCAAGCACTCTTTACAAGAGAGGTATTGCCCCAGAGCTTCTCACCTCCATATATGCACCAGAAGGAAGATACTGGAGAAAAGAAAGATGCAGATGAGAAAGATGGAGATGCGTCACTGATAGATCTCAACAGTAAAACATGGGAGCACTGCTCTGGTCATCATCAAGAAGGGGAGAAAAATGCTTTGCCTAGATGTGAAAACTATGGCGAGGAGGGGCTGCTGACGATAGGGCTTGGACATGGAAAGCTTAAGGCTCGTCGAACTGGATTTAAACCTTACAAAAGGTGTTCACTGGAGGCCAAAGAAAGCAGGATGGGAACCGGCGGCGGTCAGGGCGAGGAGAAAGGCCCCAAGAGGTTACGTTTGGAAGGGGAAGCTTCCGTTTGA
Protein Sequence:
- >SapurV1A.0162s0390.3.p|Salix_purpurea|MYB_related|SapurV1A.0162s0390.3.p
MEIFSSGEDLVIKTRKPYTITKQRERWTEEEHSRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAVVKGVSIGQALDIEIPPPRPKKKPSNPYPRKIGVGPPASQVGAKDGKLLTSASFPRCKQVLGLEKEPLPEKINGDERPTNAKDNQDDNSSEVFPLLQEPHYSSVSSVNKNPVPTLEILKKTSPFREFVSSAKEGNHDASNQSFVTVELGANQKLDNSDVKQTVQDSNTSEFSKSENFNSFSENLFQQKKSDDFIGALRTDGMQTMQNYPRHVPVHVLDGSLGTCMQTPPSDFSFQDSMFHPIGEIPACPNLYPHSAASKTTDHPNLSPRPSTHQSFPSFPPFTPTHHNQEDYKSFLHISSTFSSLIVSTLLQNPAAHAAASFSATFWPYGNVESSVDSPACAQGGFQSRQLNSAPSMAAIAAATVAAATAWWATNGLLPMCAPLHTDFPCPPATAIQSVDTGEVSATKTERKETTENPVQDPEHTEAVQAQNASKSPKITSSDCEESGGSRLNTVPEVVDLELTTTPHEVQDSSKTKSRKQIDRSSCGSNTPSSSEIETDALKKVEKGTEEPKEDDANHPASESSSHRCRSSSSTSDSWKAVSEEGRLAFQALFTREVLPQSFSPPYMHQKEDTGEKKDADEKDGDASLIDLNSKTWEHCSGHHQEGEKNALPRCENYGEEGLLTIGLGHGKLKARRTGFKPYKRCSLEAKESRMGTGGGQGEEKGPKRLRLEGEASV*