Information report for SapurV1A.0023s0240.3.p
Gene Details
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Functional Annotation
- Refseq: XP_002316354.2 — uncharacterized protein LOC7468404 isoform X1
- Refseq: XP_024466716.1 — uncharacterized protein LOC7468404 isoform X1
- Refseq: XP_024466717.1 — uncharacterized protein LOC7468404 isoform X2
- TrEMBL: B9HU46 — B9HU46_POPTR; Uncharacterized protein
- STRING: POPTR_0010s22670.1 — (Populus trichocarpa)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Gossypium arboreum: Cotton_A_23417_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D10G2114, Gh_A10G1853
- Juglans regia: WALNUT_00007314-RA
- Lotus japonicus: Lj5g3v1839400.2, Lj5g3v1839400.1
- Manihot esculenta: Manes.07G103600.1.p, Manes.10G044400.1.p
- Populus trichocarpa: Potri.010G220000.4, Potri.010G220000.3, Potri.010G220000.1, Potri.010G220000.2, Potri.008G041900.1
- Prunus mume: XP_008233343.1
- Prunus persica: Prupe.2G215600.1.p, Prupe.2G215600.2.p
Sequences
CDS Sequence:
- >SapurV1A.0023s0240.3.p|Salix_purpurea|MYB_related|SapurV1A.0023s0240.3.p
ATGCCGCCAGAGCCATTGCCGTGGGACCGGAAGGACTGCTTTAAGGAGAGGAAGCACGAGAGGTCCGAGACGACGTCTTCTTCTTTTGGTGGCGGGTCTACGCCGCGATGGAGGGAATTTTCTTTTTCTTCCTCGAGTAATAATGGATCCCCTTGCGATTTCAATCGTTGGGGTCCCCATGACTTTCGCAGGCCTCCTGGTCATGGTAAGCAGGGTGGTTGGCACATGCTTTCTGAAGAATCTGGTCATGTGTTTTCACCATATAGGATGAGTGACAAGATGCTGGAAGATGAGAATTGCCGGCTGTTTTCGCGTGGAGATGGAAGATATGGCCGGAACAATAGGGAAAATAGGGGGTGTTTCAGCCAGAGAGACTGGAGAGGTGGTCATTCATGGGAAATGATCAATGGGTCTCCAAATATGCCTGCGAGGCAGCGTGATGTGAATAATGATCAGAGGTCATTTGATGAAATGCTAATGTATCCCCCCTCTCATCCTGCTCATTCTGAATTTGCAAACTCATGGGATCATCATCAATTGAAAGACCAAGATGATAATAATAAGATGGGTGATGTTGTCAGTTTGGGCACGGACCAAAGAGGTGATAAAGAGATCCCACTCGACTGGAAGCCTCTTAAATGGACACGCTCTGGAAGCCTGTCTTCCCGAGGATCTGGTTTCAGTCATTCAAGTAGCTCGAAGAGCCTTGGGGGTGCAGATTCAAATGAAGGAAAGACCGAGTTGCAGCCGAAGAATGCCAGTCCTGTACAGCCCCCTTCAGTGGATGCTGCAGCCTGCGTTACTTCTGCAACACCATCTGAAGAGGTGTCTTCTAGGAAAAAGGCGCGCCTTGGATGGGGCGAGGGGCTGGCAAAGTATGAGAAGAAGAAAGTTGAAGGCCCAGATGCAAGTGAGAACAAAGATGGAGCTGCTGTTTCCGCTATTAACATGGAGCCCATTCATTTTCTAACTTCAAACTTGGCTGACAAGAGCCCCAGAGTTATGGGCTTTTCAGATTGTGCTTCTCCTGCAACACCTTCCTCAGTTGCTTGCAGCTCCTCACCGGGTTTAGAGGAGAAAACTTTTCTTAAGTCAACAAATGCTGATAACGTTGCCAGTAACTTATGTGGTTCACCTAGTGTTGGTTCTCAAAGCCATATTGAGGGGCTATCTTTTAATTTAGAGAAGATGGATGTCGGTTCTATAGGTAATCTGGGATCTTCCCTTGCTGAATTGCTTCAGTCTGATGATCCAAGTTCTATGGACTCTGGTTTTATGAGGCCCACTGCAATGAATAAGCTCCTTGTATGGAAAGGTGACCTTTCAAAGGCATTGGAATTGACGGAATCAGAAATTGATTCTCTTGAAAATGAACTGAAGTCCATGAAATTTGAATATGGAAGCAGGTGTCCCTGTCCAGCAGCATCCACTCCTCTGTTTGTGAGTGATGTAAAACCTTGTAATGTACAGGGGGTGGCCTCTAACAGTGTCCCTCGGCCTTCTCCCTTGCAAGTTGCATCACATGGGGATGGAATCGTGGAGAAGGTTTCTTTTTACAATGGTGGGCTGGAAGTTCATGGTGATGTTAAGGATAATGATATTGATAGTCCCGGAACTGCTACATCTAAGCTTGTTGAACCATTGTGCTTGGTGAGGATAGATTCATCATCTTTTGTTTTGAAAAATGATTTCGATGGTATTCAGTCTGCAAGGATGGGCTTGAAAGTCTCAGTTCCCTGTGCTGATGATGAAGAGACTGGTGTATTTGCTTCCAAGGATAGTGTACCTTCTTCTGTTGATGTGATTTCAGATACAAATGGAGAAGATAATTTATGTAGTCTAATACTGGCTTCTAATAAAGAATCTGCTAGTGGAGCATCTGAAGTATTTAATAAGTTACTGCCCAGTGATCAGTGCAAGTTTGATTTTTCGGCTGTTACCAATGGATCCTCTTTGCAGACTGATGACTTAGTTGTGAAAAAGATTGCTAAAAGGAAACGACTCTTAAGATTTAAGGAGATAGCTGTAACCCTTAAATTTAAAGCCCTTCAGCATCTGTGGAAGGAAGATATGCAACTGCTTTCTATAAGGAAGTATCGGGTGAAGTCTCAGAAGAAATGTGAACCAATCTTGCGGACAACCCATAGTGGGTATCAAAAACATCGTTCTTCCATTCGTGCTCGATTATCTTCTCCTGCTGGAAATTTGAGCCTGGTCCCTACAACAGAGACCCTCAACTTCACAAGCAAGCTGCTTTCAGATTCTCAGGTCAGGCCTTACAGGAATGCTTTGAAAATGCCAGCTATAATTTTGGACAAGAAAGAGAAGATGGTATCACGGTTTATCTCTAGTAATGGATTGGTTGAAGATCCTTATGCTGTTGAGAAGGAGAGAGCTATGATCAATCCCTGGACTTCAGATGAGAAAGAAATTTTTATGCAAAAGATAGCGACTTTTGGGAAGGATTTCCGAAAAATTGCTTCTTTTCTTGATCACAAGTCAACTGCAGACTGTGTTGAATTTTACTACAAAAATCACAAATCTGATTGTTTTGAAAAAACTAAGAAGAGTGAGCAAACTAAAACTTCTACTAACTACTTGATGGCATCAAGTACAAAATGGAATCGTGAATTGAATGCTGCTTCACTTGATATTTTGGGCGTGGCTTCACGGATTGCTGCTGATGCTGACCATGCCATGAACAGAATGAAAGAGAGACTGTTGCTGCTGATGTTTTGGGTTCACTGTCCTCGGAGGCCATGA
Protein Sequence:
- >SapurV1A.0023s0240.3.p|Salix_purpurea|MYB_related|SapurV1A.0023s0240.3.p
MPPEPLPWDRKDCFKERKHERSETTSSSFGGGSTPRWREFSFSSSSNNGSPCDFNRWGPHDFRRPPGHGKQGGWHMLSEESGHVFSPYRMSDKMLEDENCRLFSRGDGRYGRNNRENRGCFSQRDWRGGHSWEMINGSPNMPARQRDVNNDQRSFDEMLMYPPSHPAHSEFANSWDHHQLKDQDDNNKMGDVVSLGTDQRGDKEIPLDWKPLKWTRSGSLSSRGSGFSHSSSSKSLGGADSNEGKTELQPKNASPVQPPSVDAAACVTSATPSEEVSSRKKARLGWGEGLAKYEKKKVEGPDASENKDGAAVSAINMEPIHFLTSNLADKSPRVMGFSDCASPATPSSVACSSSPGLEEKTFLKSTNADNVASNLCGSPSVGSQSHIEGLSFNLEKMDVGSIGNLGSSLAELLQSDDPSSMDSGFMRPTAMNKLLVWKGDLSKALELTESEIDSLENELKSMKFEYGSRCPCPAASTPLFVSDVKPCNVQGVASNSVPRPSPLQVASHGDGIVEKVSFYNGGLEVHGDVKDNDIDSPGTATSKLVEPLCLVRIDSSSFVLKNDFDGIQSARMGLKVSVPCADDEETGVFASKDSVPSSVDVISDTNGEDNLCSLILASNKESASGASEVFNKLLPSDQCKFDFSAVTNGSSLQTDDLVVKKIAKRKRLLRFKEIAVTLKFKALQHLWKEDMQLLSIRKYRVKSQKKCEPILRTTHSGYQKHRSSIRARLSSPAGNLSLVPTTETLNFTSKLLSDSQVRPYRNALKMPAIILDKKEKMVSRFISSNGLVEDPYAVEKERAMINPWTSDEKEIFMQKIATFGKDFRKIASFLDHKSTADCVEFYYKNHKSDCFEKTKKSEQTKTSTNYLMASSTKWNRELNAASLDILGVASRIAADADHAMNRMKERLLLLMFWVHCPRRP*