Information report for SapurV1A.0018s0030.1.p
Gene Details
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Functional Annotation
- Refseq: XP_024443805.1 — uncharacterized protein LOC7484006 isoform X1
- TrEMBL: B9II56 — B9II56_POPTR; Uncharacterized protein
- STRING: POPTR_0016s05370.1 — (Populus trichocarpa)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Capsicum annuum: CA10g19550
- Cicer arietinum: XP_012567479.1
- Citrus sinensis: orange1.1g003750m, orange1.1g005228m
- Gossypium arboreum: Cotton_A_07810_BGI-A2_v1.0
- Juglans regia: WALNUT_00021724-RA
- Manihot esculenta: Manes.09G026400.1.p
- Populus trichocarpa: Potri.016G053300.1, Potri.016G053300.2
- Prunus mume: XP_008240866.2
- Ricinus communis: 27810.m000638
- Solanum tuberosum: PGSC0003DMP400041042, PGSC0003DMP400041041
- Vitis vinifera: GSVIVT01033321001
- Ziziphus jujuba: XP_015899006.1
Sequences
CDS Sequence:
- >SapurV1A.0018s0030.1.p|Salix_purpurea|MYB_related|SapurV1A.0018s0030.1.p
ATGGACGACCCATCTGGTTCGGCTACGACCCTCGCGTGGCTTTGGGTGATTGAGTACTTGGCAAGTTTTCCGCATATAGAGCACTCGATTTTACGTGAATTGATCGAGGCAGCTCCGGAAATACCTGATGACTTTGGGAAAAACACGAGGGAAATGGTTGCTTTGAGATGCTTAGAGGATTTGTTTTGTCGTAGGGATAATGGAGTTGCGAATGATGTTACTTCTAAAGGACTGAAAGTCACGTTTGATTTGTCGGAGAGTTGTGAGGATGTGCTTCAGTCCATACTGCAAGAGACATCAGTATCAGATTTGAATAGGGGTGGACCGGAGCTATTGAAGTGGGATATTCACCCTTTCATTATGCATAAAAGAGCTTGCATGCCTAAATGTGCTTTGGAGAAGGTGAAAGATGCAATTCTTGAGGGTTTTCATCCATATGCTTCATTGAAGGAATATAGTGAACTGGTGAATGCAAATGATAGGGGTAATAGAATCACTACAGATTATGGGGACGATGGTGCACCTGTGGGGAGGGTAGATGGGAGTGATACTGATGGACAAATGAAACCTCCTGACGAAAGTCCCATTCATTTGCTGCTTGAAAATGAGAATGCAGGGGAAGACAATTCACATTACAGGAATTCGTTACACTCTGAGAGAGAGAGAAGTGGTTCGGCTAGTCAAAACTTGGCTGGAGACCATGAAGATCAAGGTTGTGTCGATCATCTTCAGCCACAAGCCAAGAGGTTCAAGGAAGATGCCTTGCATGACAATCTGTCCGTGGGACAAATCTCAACAACTCCTCCACAGCACAAGGACTTGTTAGAAGATTCATTTGAGATGGTGGTTGAGGATTCTGAAAACAGAGATTTTCACTTGGCAAAAGAATCTTCACAGGGAGGACTGGAAGGAAGCAGACCTGTAGAGAACGATCATGATGAAGATGTTGGTATAGGTAGGCATGGGTGTAGTCTTGATGCTGATAATGAATTCCAGCACAATCAGCATGAAATTGCTCATAATGCCAACATAATGCCACTATCTGGGGATGGACTCCATCAGTATAGCTTTGTGGATGAAATCAATCATGCTGAACCAAGAAAATCAAATGCTGCACCATCTTCTGGAACCTCGGATAAATTATTTATTAATGGAAGCAAAGACAACTTTGATCATAGTGGTCGGCCAAAACCATCAAATAGTGTATCCTCAAATGGATTTCACAGGAATACTGATGCTGATGAAAGAGAAGCTGGCACGAACCTTCTATATGAAGAAGATGAGTCAAATGAGAGTGATGAGTATGATCATGAGAGGGTTGATGTTGGTTTGAAGAAGAGTCAATTTTTGAGTTCTCAATATATGTCAAGACATGATTCTCTGGCAGAAGTTAACTGGACAGATCAAAATCTTTGCGTAAAATGCGGTAAAGATGGTCAGTTGCTGGTTTGTGGTGCTGGTAGTTGCTCATTGGTGACTCATGAGAACTGTTTAGTTTTCTCACCACATTTTGATGAGAGGGGAGACTTTTACTGTCCTTTCTGTGCATATTCTCTTGCTATTTCAGAGTACCTTGAAGCTAAGAAAAAAGCCTATTCAGCGAGGAAGGAACTGAAGTTATTTATTGAAACGAGACAGGAGTATCAATCAAACAAACATGCTCAAAGACTACATAGCAAAAGACATGGCAGCTCAAGACAGAATGAAGATGAGGATCTGCTTAATAAATTTCTTGATTATGAGAATTTGGCCGGAACAAAACGCATACAATCAAATAGTCGAGGTCAGATATCTGAAGGTAATGACCATCAATTTCAAAAAGGAAAAAGGAAGAAGCAAGGAGAGCCTTTCGCATCATGCATTGGTTTTGATTCGCTGTGTAGAGAAGAAGAGCCTGATGTAAATGTTAGGACTAATCATTTATCCACTGTAGAAAAGGAAGGGGAGGAGGTGGTTCGAGAAAACTCATCTGGAACTGAACTGGACATAAATCAACACCAAGTTAGTGTTGATCCTAATTACTGTGATGGTAATCAATTGTGTAAAGAAAAAGAGAATGTCTCTGGAAGCCAGAGAATAGATGGACGAAGACGGAAAGCTGTTTGTGCCATCAGCAGCGATGGAGGAGACATCTCTGGTGACGAAGATGACAAGTCAATAACTACTAATTACTTCATAAGATTCCGAAAGAGAGAGAGACAATATACCCCTGCAATGCCTCAGTCGAGGCGAAAAAAAGTTCCGTGGACAGCTCATGAGGAGGAGATACTCAAGGAGGGAGTGCAGAAATTTGCAAGTGACGGGAAATATCCCTGGAAAGACATTTTGGAGTATGGTAGTTCTGTATTTGCGAATGGCCGAACAGCAATAGACCTCAAGGATAAATGGAGGAACCTGTGCAAATCAAGTCCTAAATCCAAGTAA
Protein Sequence:
- >SapurV1A.0018s0030.1.p|Salix_purpurea|MYB_related|SapurV1A.0018s0030.1.p
MDDPSGSATTLAWLWVIEYLASFPHIEHSILRELIEAAPEIPDDFGKNTREMVALRCLEDLFCRRDNGVANDVTSKGLKVTFDLSESCEDVLQSILQETSVSDLNRGGPELLKWDIHPFIMHKRACMPKCALEKVKDAILEGFHPYASLKEYSELVNANDRGNRITTDYGDDGAPVGRVDGSDTDGQMKPPDESPIHLLLENENAGEDNSHYRNSLHSERERSGSASQNLAGDHEDQGCVDHLQPQAKRFKEDALHDNLSVGQISTTPPQHKDLLEDSFEMVVEDSENRDFHLAKESSQGGLEGSRPVENDHDEDVGIGRHGCSLDADNEFQHNQHEIAHNANIMPLSGDGLHQYSFVDEINHAEPRKSNAAPSSGTSDKLFINGSKDNFDHSGRPKPSNSVSSNGFHRNTDADEREAGTNLLYEEDESNESDEYDHERVDVGLKKSQFLSSQYMSRHDSLAEVNWTDQNLCVKCGKDGQLLVCGAGSCSLVTHENCLVFSPHFDERGDFYCPFCAYSLAISEYLEAKKKAYSARKELKLFIETRQEYQSNKHAQRLHSKRHGSSRQNEDEDLLNKFLDYENLAGTKRIQSNSRGQISEGNDHQFQKGKRKKQGEPFASCIGFDSLCREEEPDVNVRTNHLSTVEKEGEEVVRENSSGTELDINQHQVSVDPNYCDGNQLCKEKENVSGSQRIDGRRRKAVCAISSDGGDISGDEDDKSITTNYFIRFRKRERQYTPAMPQSRRKKVPWTAHEEEILKEGVQKFASDGKYPWKDILEYGSSVFANGRTAIDLKDKWRNLCKSSPKSK*