Information report for Rsa1.0_02722.1_g00004.1
Gene Details
|
|
Functional Annotation
- Refseq: XP_018490458.1 — PREDICTED: protein LHY
- Refseq: XP_018490465.1 — PREDICTED: protein LHY
- Refseq: XP_018490473.1 — PREDICTED: protein LHY
- Refseq: XP_018490479.1 — PREDICTED: protein LHY
- Swissprot: Q6R0H1 — LHY_ARATH; Protein LHY
- TrEMBL: A0A078FL85 — A0A078FL85_BRANA; BnaC05g00840D protein
- STRING: Bo5g002760.1 — (Brassica oleracea)
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043433 — Biological Process — negative regulation of sequence-specific DNA binding transcription factor activity
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT1G01060.3, AT1G01060.2
- Brassica napus: GSBRNA2T00085393001, BnaC05G0010100ZS, GSBRNA2T00150502001, BnaA10G0008600ZS
- Brassica oleracea: XP_013587353.1, XP_013587352.1, XP_013587351.1, XP_013587350.1, Bo5g002760
- Brassica rapa: XP_009119664.1, Bra033291
Sequences
CDS Sequence:
- >Rsa1.0_02722.1_g00004.1|Raphanus_sativus|MYB_related|Rsa1.0_02722.1_g00004.1
ATGGATACAAATACATCTGGAGATGAGTTATTAACCAAGGCAAGAAAGCCGTATACTATTACAAAGCAGCGGGAACGATGGACAGAGGATGAGCATGATAGGTTTCTTGAAGCCTTGAGGCTTTATGGAAGGGCCTGGCAACGCATAGAAGGTAACATATTGGGACAAAGACTGCTGTTCAGATCAGACAATCTTCTATCTAGTGAAGATGCAACTGGTTGGACAGGAAATGAAGTGATTGTCTTTGTCTACCCCCGTACAATTCGGTTGGAGAAAGAGGCTGAAGCTAAAGGCATTCCTGTTTGTCAAGCTCTCAACATAGAAATCCCACCTCCTCGTCCTAAAAGAAAACCCAATACTCCTTATCCTCGCAAACCTGGCCCATCTTCCTCTCAAGCACCATCAGCAAAACTTGCCTCTTCTTCACAATGTAACCAGGCTTTCTTGGATTTGGAAAAAGTGCCCATTAACGAGGAAACATCAACTGGGAAAGAAAATCAAGATGATAACTGCTCAGGGGTTTCTACTGTGAACAAGTTTCCCTTACCAAAGAAACCTGAACCGTCTCTAAGAAAGGAGAGTGCTGATAATGGAACAAGTAAGGCGTCAAATGTGGAAAACATGGTTCAAGATCTTCCCGAGAAGAACAAAGACAGAGTTGCTGACAGCGCAAGGAACTACCCTTGGCATTTCCCCGCGGATTTTGTAAACGGAAATGGGGCAAAATGCGCTCAGTTTCATCCCCCTCCAGGTATGGTATCTCAAGACTTGATGTTTTGTCCTATGGGAGATCGTGTTCACGGGCACGTGAATCTTCCAGCTACCACAACATCTTCTGCTACTACTACTACTACAACTACTTCTCAACAGGCGTGCCCTTCTCAGGATGTTTACCGTTCGTTTCTTCACTTCTCCTCTACTTTCCCCAATCTCATTATGTCAAGTCTCCTACAGAACCCTGCAGCTCATGCTGCAGCCACGTTCGCTGCTTCGGCCTGGCCCTATTCCAATGTCGGGAACTCGGGAGATTCATCAACGCAAATGAGCTCTTCTCCTCCTCCTCCAAGTATAGCTGCTATAGCTGCTGCTACGGTAGCTGCTGCAACTGCTTGGTGGGCTTCTCATGGACTTATTCCTGTGTGTGCTCCTCCTCCTCCTACTCCAGTCACATGCCTTCCATTACCAACCTTTGCTGTTCCAACTCCCTCAATGGAGAAGATGGATACCGTTAAAAGTAATCAAGAACCGCTGGAGAAACAGAACACAGCTCTGCAAGATCAAAAAATGGCTTCAAAATCTCCAGCTTCATCATCCGACGATTCAGAAGAGACTGGAATAACCAAGCTAAACGCTGCCGACTCGAAAACAAATCGTGACAAGGAGGAAGTTATTGTTGACGCTGCTGCTGCTGATGCTTTGCATGATCCAAACGCGTCCCCAAAGAAAAAGCTGGTGGACCGCTCATCGTGTGGGTCAAACACACCATCAGGAAGTGACGCGGAAACAGACGCATTAGATAAGATGGAGAAAGATAACGAGGATGTAAAGGAGGCAGATGCAAACCAGCCAAGTGTTATTGAGTTAAGCAACCGTCGGAGTAAAATCAGAGACAACAATAACAACCAAACTACTGATTCATGGAAAGAAGTCTCCCAAGGGGGTCGTAAAGCGTTTCAGGCTCTATTTGCAAGACAGAGATTGCCTCAGAGCTTTTCACCTCCTCAAGTGGAGGATAATGTGAATGGAAAACAAAGCGACACGTCAATGCCAATGGCTCCTGATCTCAACAAGATTCAAGGTTCTTGTGATGCAGACCAAGAAAGTGGAGTAATGATGATAGGTGATGGACAGGGGAAGAGCCTTAAAACGAGACAGTCAGGGTTTAAGCCATACAAGAGATGTTCTATGGAGGTGAAAGAGAGTCAAGATGGGAACACGAACAATCAGAGCGATGAAAAAGTCTGCAAGAGGATTCGATTGGAAGGAGAAGCTTCAACATAA
Protein Sequence:
- >Rsa1.0_02722.1_g00004.1|Raphanus_sativus|MYB_related|Rsa1.0_02722.1_g00004.1
MDTNTSGDELLTKARKPYTITKQRERWTEDEHDRFLEALRLYGRAWQRIEGNILGQRLLFRSDNLLSSEDATGWTGNEVIVFVYPRTIRLEKEAEAKGIPVCQALNIEIPPPRPKRKPNTPYPRKPGPSSSQAPSAKLASSSQCNQAFLDLEKVPINEETSTGKENQDDNCSGVSTVNKFPLPKKPEPSLRKESADNGTSKASNVENMVQDLPEKNKDRVADSARNYPWHFPADFVNGNGAKCAQFHPPPGMVSQDLMFCPMGDRVHGHVNLPATTTSSATTTTTTTSQQACPSQDVYRSFLHFSSTFPNLIMSSLLQNPAAHAAATFAASAWPYSNVGNSGDSSTQMSSSPPPPSIAAIAAATVAAATAWWASHGLIPVCAPPPPTPVTCLPLPTFAVPTPSMEKMDTVKSNQEPLEKQNTALQDQKMASKSPASSSDDSEETGITKLNAADSKTNRDKEEVIVDAAAADALHDPNASPKKKLVDRSSCGSNTPSGSDAETDALDKMEKDNEDVKEADANQPSVIELSNRRSKIRDNNNNQTTDSWKEVSQGGRKAFQALFARQRLPQSFSPPQVEDNVNGKQSDTSMPMAPDLNKIQGSCDADQESGVMMIGDGQGKSLKTRQSGFKPYKRCSMEVKESQDGNTNNQSDEKVCKRIRLEGEAST