Information report for Rsa1.0_01945.1_g00001.1
Gene Details
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Functional Annotation
- Refseq: XP_013714640.1 — telomere repeat-binding protein 1-like isoform X1
- Swissprot: Q8L7L8 — TRP1_ARATH; Telomere repeat-binding protein 1
- TrEMBL: A0A3P6CI85 — A0A3P6CI85_BRACM; Uncharacterized protein
- STRING: Bra002566.1-P — (Brassica rapa)
- GO:0009651 — Biological Process — response to salt stress
- GO:0009733 — Biological Process — response to auxin
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0009873 — Biological Process — ethylene-activated signaling pathway
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0005737 — Cellular Component — cytoplasm
- GO:0005886 — Cellular Component — plasma membrane
- GO:0031965 — Cellular Component — nuclear membrane
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT3G46590
- Brassica oleracea: XP_013611826.1, XP_013611825.1, XP_013611824.1, XP_013611823.1, XP_013611827.1
- Brassica rapa: XP_009120453.1, XP_009120452.1, XP_009120454.1
- Gossypium hirsutum: Gh_D05G0921
- Vitis vinifera: GSVIVT01024936001
- Ziziphus jujuba: XP_015874015.1, XP_015874013.1
Sequences
CDS Sequence:
- >Rsa1.0_01945.1_g00001.1|Raphanus_sativus|MYB_related|Rsa1.0_01945.1_g00001.1
ATGGTGTCGCATAAGTGTGTAGAAGAGTTCTCTTTACAGTTCCCTGCCAATGCTCGAGCCCCCAGATCCGCAAGGAAGAGGCGCAGCTTCAAGGAGGAGGAGATAAGTGAAAATGATAGAACGTGTGCGATTGATCTACTGGCCACCGTAGCTGAAAACTTGCTGTCCGAGAGTGGGAGTTGTCACATGTCTATTGACAAACCTGCTAATGGGGTTGAAGATCATTGTCTCGTGACACAAATCCACAGCGTGAAGGAGGAGTTCCCTGTGGAAGAAAAGCCTGCTACTTTACCCGATGTTGGTCCTTATCAGGGATCAATGAGCCCTTGCGGATTCAGTTCTGTGATTAACGGCAAAGTAGAGATTGAGGCTGAGGGTTTTAGCAACTCTGGTGCTGTAGTTCTGGATGCGAGACCTAATGGTGTAGGTAGTTTAGGTGGTAGTAGTAGTAGTAGAACCAAAGTGCCTTCAATGGGGGCTGCTGTTACTTCCCGTGGCGCTTTGGATGATGTAAATTTGTTTAGTAGAGATGATGATGAAAACTTTTCTGGGTATATATGCCCTCGTGTTACCAAAAAACCACCTAGGTCTGTGCCGCGTGTTGGAGACAGAAGAATCAGGAAGATATTGGCTTCTAGACACTGGAAAGGAGGTTCAAGACATTCAGAAGCAAAGTCATGGAGAAGTTATTACTTGCACCATCAGAGGAGCTATCCTATCAAGAAGAGGAAATACTTTGAACACATTTCTGATTCTGTGTCTGATGATTATCGTCTGCGCTCTAAGATGCAAAGAGGCAGCAGAACTGTTACTACTATGAAAGGTCCAGGTGCATCCTTTGTCTCAAGCGACTCTCATGTGAGACTGCGAATCAAGTCATTCAGGGTGCCTGAGCTATTTGTAGAGATTCCAGAAACCGCTACTGTTGGCTCCTTGAAGAGAATGGTGATGGAAGCAGTGAGCACTTTATTGAGCGATGGACACCGAGTTGGTCTGATGGTTCAAGGGAAGAAAGTCAGAGATGATAACAAAACACTTCATCAGACTGGGATCTCTCAGGATAACACCCACTTGGACTCTCTTGATTTCAGCCTCGAACCCAGCTCAGAAGCGCCTCATCTGTTATCTAGTAACCCGTTGGGACATGTCTGCGAGGAACTGCCTATATGCCATGCTTCTGACATGGACACCGTGTTCAAATCTGAGCATGATTTAGCACTGTACCCATCTCACTCGTTTGACAAGGAAACCGCAACAGATGTTTCCAAAGCTCTGGTTCCTGCTACTGCCGCGCTCACCGAACTGTCTCCTCAACTGCCTCGTCATAAATCTAAGCAGCAGCAGCAGCAGCAGCAGACTGCACAGCGAAGAATGCGTCGACCTTTCTCTGTTACTGAAGTAGAAGCACTTGTTCAAGCTGTTGAGAAACTCGGTACTGGAAGGTGGAGAGATGTTAAGCATAGTGCTTTCGAAGATGCAGACCACCGCACTTACGTTGATCTCAAGGACAAGTGGAAAACGCTGGTTCATACAGCTAAGATATCGCCACAGCAGAGGAGAGGAGAGCCAGTGCCGCAGGAACTTCTAAACCGTGTGTTGAACGCTCACGGCTACTGGTCACAGCAACACATGGAGACAACAACACTGGCTCTGCCTAAACCAGAGTCTGTGCTGCTTCTCTAA
Protein Sequence:
- >Rsa1.0_01945.1_g00001.1|Raphanus_sativus|MYB_related|Rsa1.0_01945.1_g00001.1
MVSHKCVEEFSLQFPANARAPRSARKRRSFKEEEISENDRTCAIDLLATVAENLLSESGSCHMSIDKPANGVEDHCLVTQIHSVKEEFPVEEKPATLPDVGPYQGSMSPCGFSSVINGKVEIEAEGFSNSGAVVLDARPNGVGSLGGSSSSRTKVPSMGAAVTSRGALDDVNLFSRDDDENFSGYICPRVTKKPPRSVPRVGDRRIRKILASRHWKGGSRHSEAKSWRSYYLHHQRSYPIKKRKYFEHISDSVSDDYRLRSKMQRGSRTVTTMKGPGASFVSSDSHVRLRIKSFRVPELFVEIPETATVGSLKRMVMEAVSTLLSDGHRVGLMVQGKKVRDDNKTLHQTGISQDNTHLDSLDFSLEPSSEAPHLLSSNPLGHVCEELPICHASDMDTVFKSEHDLALYPSHSFDKETATDVSKALVPATAALTELSPQLPRHKSKQQQQQQQTAQRRMRRPFSVTEVEALVQAVEKLGTGRWRDVKHSAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAHGYWSQQHMETTTLALPKPESVLLL