Information report for Rsa1.0_01729.1_g00008.1
Gene Details
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Functional Annotation
- Refseq: XP_018441744.1 — PREDICTED: TSL-kinase interacting protein 1 isoform X1
- Refseq: XP_018441745.1 — PREDICTED: TSL-kinase interacting protein 1 isoform X1
- Swissprot: Q8LJT8 — TKI1_ARATH; TSL-kinase interacting protein 1
- TrEMBL: A0A0D3BRC5 — A0A0D3BRC5_BRAOL; Uncharacterized protein
- STRING: Bo4g031010.1 — (Brassica oleracea)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT2G36960.3, AT2G36960.1, AT2G36960.2
- Brassica napus: GSBRNA2T00117021001, GSBRNA2T00053948001
- Brassica oleracea: XP_013637615.1, XP_013637614.1
- Brassica rapa: XP_009143543.1, XP_009143542.1
- Citrus sinensis: orange1.1g003898m
- Raphanus raphanistrum: RrC7850_p1
Sequences
CDS Sequence:
- >Rsa1.0_01729.1_g00008.1|Raphanus_sativus|MYB_related|Rsa1.0_01729.1_g00008.1
ATGCTTAAAAACCTTTGGGCAATGCAAGCTGAGAAGGAGGTGTCGTTGAGCACTCAAGGTCCTGTAGAAGAGGGCCTCATATCAAACCAGAACAGCAACCCTAATATAGCCTCTTCTGCTTCTATCAGTGTTGCTCAGTTTCCTGCTAAGAAGCCGACAAGGCAATGGGCTGCTTGGACGCATCAAGAAGAGGAAAGTTTCTTCACTGCCCTTCGTCAAGTTGGAAAGAACTTTGCGAAGATTACTTCTCGTGTCCAAAGCAAAAACAAGGACCAGGTTAGACATTACTATTATCGTCTAGTCAGGCGTATGAACAAACTTCTGGGTCCGGAACTGAGTCTTGATGCCAAAAACCCAAAGGACACAAATGCTGCAATGCTACGATGGTGGTCTTTACTGGAAAAGTACAGTTGCAAAGCTTCAAAACTTCACCTTAAACCCCGGAGATTCAAGCTATTCTTAGAGGCCTTGGAACACCAATTGCTGAAAGACCGCAGAAAAAGCTCAAGAAAGCGGGCTTGCCATGGAGAAAGTTTCTCTTCGGCCTCCCTTGGAAACATCTCAAGTCATAGCAGGGAAAGAGGATTGGATAACAGTCCATTTAAACTGATTCTTTGCGACAGCCAAAATGTTAGGCCTGGGAGAGCATCTACCAAACATGGTGAAAGCCTAGGTGTTAGGATTGGGGATGAAAAAGAAGATACAGCCGTTGGAAGATGTGGAAGGCGACGAAAGCAAGAACACTTGGAACGAACATCAATCGACAAAGATATGGATGTCCAAAAAGACTTAGGCCCCACAAGATATTTAACAGGAAAGTCTCCACTTTCTCTACCCTCCTCTGGTGAGGTTCCTCTCAATGATGCCAACATGCTATTTTCTGCCAAGTTGAAACTTCAGTTGTTCCCAATTGATGAATCTACAAGAAGATCCTTGGAAGTGGACAAGCACAATCCGCATCTGGAACTTACTCTAAGTAATCGCAAGAAGATATCTTCTGTGCTGGAGCATCTCAACCGCAAATGGGGAAGTTCAAGTTGTGCATGTGGAGAGCTAATGCTGTTCCCTTACAATGCAAGGAAAGAAACTCTACCTTTGCATCAGAGGTGGACTAATGACTCATTTCTAAGCGCAGCAGAAGTGTATTCAATGGTTGGACGTCCCTCGCTTTTCCGCTTAAGGTATGGCTGGTTCGTCCAGGATGCATCAGGTTCTTTTATTTCTCAGGTTCCAACTTCAGCTTCTTATCCTTCACTCGAGGATAACATGAATGTGGATGATGCGAATGAGGTCAACATGCTCCTTACTGAATCAGGACCCTTATCTAAGCATTCAACTTCTGAGCAAGCAACATCTGTAGTATGTGCCGCGGGTGATCGTCCTGCCGAAACTAGAGATAATTATGAACCTGCTTCGGCTACTATTTCTCCATTTGAGCCTTTAAGCAGCGGTAATGCACTATCAGCAGGAGCATGGGCTGATAGTCTTACCAACATAAGTATAGGTGATCTACTCTCCGAAGCGCCTGATGACATAGATAGTGATTGTGTGGATCCACCCGCCAACGAGGGTTCACATTGCCTCCTTCGAGATGTCTCATTTGCCTCCGACTCTTTCGATGCTGCAATTGCTGCTCACATACTAAGACACCAGAACAAGCCAAGTGGTCTAGTATCGATGACTTGTGGCTCTTCATCTCTATGGGATGATGAAGATACACGTGATGCCTTCTCTTTCCAGAAGAACCGCCATGCAAAGTCTTCTCCTGGAGGTATTGGCAGAGTAAATGGAGAGCTTACTCAAGTAGTGGAGGCAAAATCTGGTGATGAGGGGCCTTGTAACCTTCCTGATCAGCAGGGAGATCCAATGGAAGAGGGTCCAACAGATCCTCATACGATTGACTCTCCAGGGAAGACCATTTATGGGCTTGCGGATGTTTATTGGCCGGACTCGTTAGGACCACTGGACCTAGACATTAGATCTTCAAAGTACACAGAAGATTTGAACCTCAGTGACAGCCTCGGGGGTTTGAGCCGTCTGATAGCGACTAGCCTTGATGCGTTTCAAAACTGTTCGCTTTTTGGATTCGACAGCAAGAAGGATAAGTCTAACATGGTCTGA
Protein Sequence:
- >Rsa1.0_01729.1_g00008.1|Raphanus_sativus|MYB_related|Rsa1.0_01729.1_g00008.1
MLKNLWAMQAEKEVSLSTQGPVEEGLISNQNSNPNIASSASISVAQFPAKKPTRQWAAWTHQEEESFFTALRQVGKNFAKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPELSLDAKNPKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKLFLEALEHQLLKDRRKSSRKRACHGESFSSASLGNISSHSRERGLDNSPFKLILCDSQNVRPGRASTKHGESLGVRIGDEKEDTAVGRCGRRRKQEHLERTSIDKDMDVQKDLGPTRYLTGKSPLSLPSSGEVPLNDANMLFSAKLKLQLFPIDESTRRSLEVDKHNPHLELTLSNRKKISSVLEHLNRKWGSSSCACGELMLFPYNARKETLPLHQRWTNDSFLSAAEVYSMVGRPSLFRLRYGWFVQDASGSFISQVPTSASYPSLEDNMNVDDANEVNMLLTESGPLSKHSTSEQATSVVCAAGDRPAETRDNYEPASATISPFEPLSSGNALSAGAWADSLTNISIGDLLSEAPDDIDSDCVDPPANEGSHCLLRDVSFASDSFDAAIAAHILRHQNKPSGLVSMTCGSSSLWDDEDTRDAFSFQKNRHAKSSPGGIGRVNGELTQVVEAKSGDEGPCNLPDQQGDPMEEGPTDPHTIDSPGKTIYGLADVYWPDSLGPLDLDIRSSKYTEDLNLSDSLGGLSRLIATSLDAFQNCSLFGFDSKKDKSNMV