Information report for Rsa1.0_00002.1_g00081.1
Gene Details
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Functional Annotation
- Refseq: XP_018457352.1 — PREDICTED: mucin-17
- TrEMBL: A0A078HN06 — A0A078HN06_BRANA; BnaA09g14920D protein
- TrEMBL: A0A397XZV8 — A0A397XZV8_BRACM; Uncharacterized protein
- STRING: Bra027882.1-P — (Brassica rapa)
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Arabidopsis thaliana: AT1G58220.1
- Brassica napus: GSBRNA2T00068763001, GSBRNA2T00042030001, GSBRNA2T00086340001, GSBRNA2T00024221001
- Brassica oleracea: XP_013612085.1, XP_013605022.1, XP_013605032.1
- Brassica rapa: XP_009113330.1, XP_009102727.1
- Raphanus raphanistrum: RrC411_p4
Sequences
CDS Sequence:
- >Rsa1.0_00002.1_g00081.1|Raphanus_sativus|MYB_related|Rsa1.0_00002.1_g00081.1
ATGGTGGATAGCAGCAGCAGTAATAAGAAGAGGAAAGAGTTCATCAGTGAAGGAGACATCGCCACTCTTCTTCAAAGATATGACACGACGACGATACTGAAGCTGCTTCAGGAGATGGCGTACTACGCTGAGCTGAAGATGGACTGGAACGAGCTGGTGAAGAAGACTAGTACTGGGATCACCAGCGCTAGAGAATACCAGCTCCTATGGCGTCACCTTGCTTATCGAGATTCTCTCCTCCCCATGGACGACGATAGTGCTGCTCCTCTCCTTCAGGATGATGATAGTGACATGGAGTTTGAATTGGAAGCTTCCCCTCCTGTCAGCGTTGATGCAGTCTCCGAGGCTGTTGCGCATGTTAAAGTGATTGCTGCTTCCTATGTGCCAATTGACTCCGACATTCCTGAAGACTCAATCTGTGAGGCTCCCTTGACCATTAACATTCCTTATGGCCTGCAAAGAAGGCCCCAAGAACCATCAGACTCGTATTGGTCGTCAAGAGGGATGAATATCACCTTTCCAATCTCTCTTCAGAAAGCAGCTGAGGGACATAATGGAAATGCGTTAGCCAGTAACATGGGTCCTCGCAAGAAAAGAAAAAAATGGTCTGCTGAGGAGGATCAGGAGCTGATCGCTGCTGTGAACCGACATGGTGAAGGCAGCTGGGCCCTTATTTCTAAGGAAGAATATGAGGGAGAGATAACTGTCTCACAACTTTCGCAGCGGTGGGGATCTATAAGGAGAAGGCTCGATATTTCAAACTCTTCTACTCAATCATACCAACAGCGAACAGAAGCTGCTAATCGTGCATTATCTTTGGCAGTGGGAAATCGAGTGCCCTCAAAAAAGGTTGCAGTAGGTATACCTCCAGTGCTTACATCCGGTAGCATCACGGGAGCACAAGGCAATGGTGCCAACAGCGGTAGTTCATTGCAAGGTCAACAACAGGCTAAGCCAGTAGTTCAAGCAATTCCCCGGGCAGAAACATCCGTTCAAACTGCAAAAGCTCGAGTCGCCGCAAGGAAACCAACGTCCACTTTGAGAGCAGAACTAATGGTAACAGCTAATTCAGTAGCTACTGCAGCCTGTATGTCTGGCCTGGGAACTGCTGCATCAGTGCCAAAGGTTGAACCAGGAAAGAATGCTGCTCCTGCGTTAGTGCCAAAGGTTAAATCCTCCCAAGCCTCTTTGCCTCGTCCCTCCGGTATATCATCAGTAATGAATGCTGAGCCTGTAAAAACCGCTTCGGCAGCTTCTTTGCCTCGTCCATCAGGTATGTCATCAACTCTGAATGCCGAGCCTGTGAAATCCGCAGCGGCAGCCTCTTTCCCTCGTCCATTAGGTACTACATCAGCATCAAAGGCTGAGCCTGTTAAAACCACTTCGACAGCTGTTTTGCCACGGCCATCAGGTGTTATATCAGCGCCAAAGGCGGATCTTGTAAAAACCGGTCATGCAGTCTCTTTGCCCCGTCCATCAGGTATCATATCATCACCAAAAACTGCGCCTGTAAAAACTGCCTCTGCAGCATCTTCGCCTCGTCCAGCAAGTATGCTATCAGCACCAGTAAGGAGTGTTTCTCCTGCGGCTACGGCTGCTAATACTAAAACTCAAGTGGCTGGATCTTCGTCATCTTTTAATAAGCTTTCGCATATGGCTCCTTTCTCCAAAGGGCCTACAGTCCAGAATATTTCAGTTCCTGCTAGCTTTGCGTCTTCAAGGTTGGCTCCCACACAGAGAGCTAATACAGCTACTGTAATGCCACAAAATCCAAGTGTGGGAGTGGCAGTTACCTCCTCTTCCAAGCCGGTTGGTGTACAGAAAGAGCAAACTCAGGCAAGCAGAACAAGCCCCTTGGTTACAACAACACTTCAGCCAAATAAAACCATCTCAACAAACTCAGTGATTAGCACAGGAAAGCCGGTGGCTACACAAGTGGACACTCCACCTAGTCTTATGTCTAAAAAAGACCAAGTACTTCAGACTTGCACCGAGAAAAGTTCTTTGGCTAAACCACCTGAAAAACAGAGTAGTTCCACTGTTTCACCTTCTGTTGTGGCTGAGCCTGAAACAAAACCCAAGGATGAAGCAAGTAAAGGAAAAAGTCCTGATGTTGCAACCGTGCCAGGGACCGAGCATAAGGGGTTGTAG
Protein Sequence:
- >Rsa1.0_00002.1_g00081.1|Raphanus_sativus|MYB_related|Rsa1.0_00002.1_g00081.1
MVDSSSSNKKRKEFISEGDIATLLQRYDTTTILKLLQEMAYYAELKMDWNELVKKTSTGITSAREYQLLWRHLAYRDSLLPMDDDSAAPLLQDDDSDMEFELEASPPVSVDAVSEAVAHVKVIAASYVPIDSDIPEDSICEAPLTINIPYGLQRRPQEPSDSYWSSRGMNITFPISLQKAAEGHNGNALASNMGPRKKRKKWSAEEDQELIAAVNRHGEGSWALISKEEYEGEITVSQLSQRWGSIRRRLDISNSSTQSYQQRTEAANRALSLAVGNRVPSKKVAVGIPPVLTSGSITGAQGNGANSGSSLQGQQQAKPVVQAIPRAETSVQTAKARVAARKPTSTLRAELMVTANSVATAACMSGLGTAASVPKVEPGKNAAPALVPKVKSSQASLPRPSGISSVMNAEPVKTASAASLPRPSGMSSTLNAEPVKSAAAASFPRPLGTTSASKAEPVKTTSTAVLPRPSGVISAPKADLVKTGHAVSLPRPSGIISSPKTAPVKTASAASSPRPASMLSAPVRSVSPAATAANTKTQVAGSSSSFNKLSHMAPFSKGPTVQNISVPASFASSRLAPTQRANTATVMPQNPSVGVAVTSSSKPVGVQKEQTQASRTSPLVTTTLQPNKTISTNSVISTGKPVATQVDTPPSLMSKKDQVLQTCTEKSSLAKPPEKQSSSTVSPSVVAEPETKPKDEASKGKSPDVATVPGTEHKGL