Information report for RrC7910_p1
Gene Details
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Functional Annotation
- Refseq: XP_018485404.1 — PREDICTED: ATPase family AAA domain-containing protein 3-like
- TrEMBL: A0A078HDP0 — A0A078HDP0_BRANA; BnaC03g48340D protein
- TrEMBL: A0A0D3BEG7 — A0A0D3BEG7_BRAOL; Uncharacterized protein
- STRING: Bo3g094120.1 — (Brassica oleracea)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005524 — Molecular Function — ATP binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00062133001, GSBRNA2T00042154001, GSBRNA2T00029083001, GSBRNA2T00042407001, GSBRNA2T00131039001
- Brassica oleracea: XP_013626773.1, XP_013596257.1, XP_013588727.1
- Brassica rapa: XP_009102249.1, XP_009143738.1, XP_009150735.1
- Gossypium arboreum: Cotton_A_17029_BGI-A2_v1.0
- Gossypium hirsutum: Gh_D10G0898, Gh_A10G0855
- Prunus mume: XP_008241690.1
Sequences
CDS Sequence:
- >RrC7910_p1|Raphanus_raphanistrum|MYB_related|RrC7910_p1
ATGGCTTCCAACTCAATCATCACTTCCCGGAGCTCTACCTCGTCATGGACAGCGAAACAGGACAAACAGTTCGAAATGGCATTGGCTAAGTTCGAGAAGGACACTCCTGACCGATGGCATAATGTGGCAAGAGCAGTTGGTGGAAAATCAGTTGAAGAGGTAAAAAGACGCTATGAATTGCTCATTAGAGATGTTAATGACATTGAATCAGGACGTTACCCACTACCAAGGTTATGTTCCGCGGCGGCGATAGCAGCAGCTGCTTTCACATCAATGTCCACGTCACACAACCTAGCTCACGCCGACTCGCGATTCCGCTTCCCCTTCTTCTCTTCTTCTTCACCGCCGCCGCCGTCAGAATCTCCAGCCGATCCGTCGGAGTCCACCAAACAGGCGGCGGAGCCTGATGAGCGAAAAGGATCTGGATTCGATCCTGAGTCGTTGGAACGAGGCGCGAAAGCTCTTCGTGAAATCAACAACTCTCCTCATTCCAAACAGGTGTTTGATCTAATGAGGAAGCAGGAGAAGACTCGGTTAGCTGAATTGGCGGCCGAGAAATCGCATAACGAAGCTATTCAAGCGCACAAGGATATCGAAAGACAGAGGCAATTGGCTGAGGATCAGAGAAACCTACTGCAGCAGCAGGCACAAGCAAAAGCTCAAAACCTTCGGTACGAAGATGAGTTGGCGAGGAAGCGGCTTCAGACGGATCATGAAGCTCAGAGACGGCATAATGTTGAGTTAGTTAAAATGCAAGAGGAGTCTTCTATCCGGAAAGAGCAAGCGAGGATCGCCACGGAGGAACAGATTCAAGCGCAGCAGCGCCAGACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGACAATCCGAGTGAAAGCCATGGCTGAGGCTGAAGGCAGAGCTCATGAAGCCAAACTTACTGAGGAGCAGAACCGGAGAATGCTTCTGGATAAGATAAATGGTGAAAGGGAGAAATGGCTTGCAGCTATCAACACGACTTTCAGTCACATTGAAGGGGGAGTCAAAGCCCTATTAACTGACAGAAATAAGCTGATTATGACGGTTGGAGGAGCTACAGCATTAGCCGCTGGAGTTTATACAACACGAGAGGGTGCTAGGGTTACATGGGGTTATATTAACCGGATACTTGGACAGCCATCACTTATCCGAGAATCCTCCATGGGTAGATTCCCGTGGGCAGGCTCAGTGTCTCAGTTTAAGACCAAAGTCTCTAAGTTTGGTAAAGCTGCATCTGCAAAAGGAGAAAACCCCCTTGATAATGTTGTTCTCCATCCTTCTCTAAAGAAGAGAATTGAGCATCTTGCTAGAGCCACTGCGAATACTAAGTCACATCAAGCGCCATTCCGGAACATGATGTTTTATGGTCCTCCTGGTACCGGTAAAACTATGGTGGCCAGAGAGATTGCTCGGAAGTCGGGTCTTGATTATGCTATGATGACAGGAGGAGACGTTGCTCCTCTGGGTGCACAGGCTGTTACGAAAATCCATGAGATTTTTGATTGGGCTAAGAAATCAAACAAAGGTTTACTTCTTTTCATCGATGAAGCTGATGCTTTCCTATGCGAGCGTAACAGCACGTATATGAGCGAGGCCCAGCGTAGCGCTCTGAACGCTCTACTCTTTCGAACAGGTGATCAGTCACGGGACATAGTTCTGGTCCTGGCTACTAACAGACCAGGGGATCTCGACAGTGCGGTCACTGACAGGATCGACGAAGTTATCGAGTTTCCGCTCCCTGGTGAAGACGAACGCTTCAAGCTCCTTAAACTCTATCTCAGCAAGTACCTAACTGGTGAAGACCAGAAAGGTGACAAAGACACGAAGACTAGATGGAGCCATTTGTTCAAGAAGCAGTCACAAAAGATAGCAGTTGAAGGAGACCTAACCGACCAAGTGATCAGAGAGGCTGCGAAGAAGACGGAAGGATTCTCTGGTCGTGAGATTGCTAAGCTTGTTGCTGGTGTTCAAGCTGCTGTGTACGGACGACCAAATTGCGTCTTGGATGCACAGCTTTTTGAAGAGATTGTTGATTATAAAATCCAAGAACACCACCAGAGAGCCAGACTAGCGATTGAAGGTGGTCAATCTTTTCCTTAG
Protein Sequence:
- >RrC7910_p1|Raphanus_raphanistrum|MYB_related|RrC7910_p1
MASNSIITSRSSTSSWTAKQDKQFEMALAKFEKDTPDRWHNVARAVGGKSVEEVKRRYELLIRDVNDIESGRYPLPRLCSAAAIAAAAFTSMSTSHNLAHADSRFRFPFFSSSSPPPPSESPADPSESTKQAAEPDERKGSGFDPESLERGAKALREINNSPHSKQVFDLMRKQEKTRLAELAAEKSHNEAIQAHKDIERQRQLAEDQRNLLQQQAQAKAQNLRYEDELARKRLQTDHEAQRRHNVELVKMQEESSIRKEQARIATEEQIQAQQRQTEKERAELERETIRVKAMAEAEGRAHEAKLTEEQNRRMLLDKINGEREKWLAAINTTFSHIEGGVKALLTDRNKLIMTVGGATALAAGVYTTREGARVTWGYINRILGQPSLIRESSMGRFPWAGSVSQFKTKVSKFGKAASAKGENPLDNVVLHPSLKKRIEHLARATANTKSHQAPFRNMMFYGPPGTGKTMVAREIARKSGLDYAMMTGGDVAPLGAQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNSTYMSEAQRSALNALLFRTGDQSRDIVLVLATNRPGDLDSAVTDRIDEVIEFPLPGEDERFKLLKLYLSKYLTGEDQKGDKDTKTRWSHLFKKQSQKIAVEGDLTDQVIREAAKKTEGFSGREIAKLVAGVQAAVYGRPNCVLDAQLFEEIVDYKIQEHHQRARLAIEGGQSFP