Information report for RrC2295_p2
Gene Details
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Functional Annotation
- Refseq: XP_018433094.1 — PREDICTED: protein ALWAYS EARLY 1-like
- Refseq: XP_018433097.1 — PREDICTED: protein ALWAYS EARLY 1-like
- Swissprot: Q6A331 — ALY1_ARATH; Protein ALWAYS EARLY 1
- TrEMBL: M4DVP0 — M4DVP0_BRARP; Uncharacterized protein
- STRING: Bra020584.1-P — (Brassica rapa)
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brassica napus: GSBRNA2T00028858001, GSBRNA2T00120517001, GSBRNA2T00144207001, GSBRNA2T00133776001, GSBRNA2T00038579001, GSBRNA2T00119961001
- Brassica oleracea: XP_013616256.1, XP_013598393.1
- Brassica rapa: XP_009129869.1, XP_009151196.1, XP_009151195.1, XP_009147247.1
Sequences
CDS Sequence:
- >RrC2295_p2|Raphanus_raphanistrum|MYB_related|RrC2295_p2
ATGGCGCCAAGTAGGACGTCCAAGAGTGTGTACAAACGTTCCACCAGAGAACCTTCTCCACAGAGAGATTTAAGGAACTCTAGCAAAACCAAGCCAAGAAGGAAGATATTGACTGATAAGCTGGGACCTCACTGGACGAAAGGAGAGCTTGAGCGTTTCTATGACGCTTATCGGAAGCATGGCAGAGACTGGAGAAAGGTAGCTGCCGCAGTGCGGAATAGCCGGTCTGTTGACATGGTGGAAGCTCTTTTTAATATGAATCGTGCATATTTGTCCCTGCCCGAGGGAACTGCGTCTGTCGCTGGCCTCATTGCAATGATGACTGATCATTACAGCGTCATAGAGGAGAGCGAAAGTGATGAAGAAGGACATGGTGCCTCTGGACTATCGATGAAATATCAGAAGCGCAAACTTGCTAAACTTCCGTCTAGTGATTTTCGAGAAGAAGTATATCCACCACATCAAGTTGCATCAGCGGAAGGCTGCCTCTCATTTCTAAAGCTGACACAAACTTATGGAATGGAGCGACGTGCCGCTGGTAAACGTACACCTCGGTTTCCTGTACCAAGTGAATACCAGAGGGATGATAGAGAAGTTTCTATGCCACCAAATAAAAGAGCCAAAAAGCAACTTGAGGCCGATGACGATGATACACTAGCGTTAGCATTGGCAAATGCAGCGAGAAGGGGAGGAGGGTCACCACATAGAAGAGCAGAAGGCAATCGAAGCACTCCAAACGGAAAAATGTCACAAGCAAAGGAAGCTCAATCCAAGCACCGTGCTAGCTCCATGGTTAGGAATGTGGTGATAATAGGCCGAGACAGAAGGCATATAAAGGGAGCGCCTGATGGAGATGTTGCTTTGTTGATGGATACGGAAGGGGTCGGTACGGTGGAGGTTCCCCAGAAGGGGAAAAATGTTAGATTTGAAGAAGCAGAAGGAGATGCTTCTGATGACAGGGGAAAAGCATGCAATGCCAATGAGGGACTCAAATCTGGAGATGAATTCGAAGCTCTGCAAGCATTGGCTGAACTGTCAGCTTTACTGTCTTCTGATGGTTTGAAGGAATCAGAATCAAATCCACGGTTGAAAGAAGACAACAGAATAGCTAACAACGTGGATGAGAAACCTAACACTCCGGAAACCTTTGTCAGAAGCTATCACAGACGAAAATCAAAACAAGCAGGACCAGAAGAAGATAGTCTTCTACCTGCAATTTCAGCTGCTGATGCTAGCAATCAGCAAATCATTGATGCTAATGCTGTTTCCATAGGGGAACTTGGCACGTCAAAAAGAAAACGTAAAACTCTACATAATAAGGAATCGGCTGAAGATGATAATTTGAAGACTCTGATAAAAAAAGCAAGACGTGCTGATCAAAGTCCACCGAAGCAGCTGAGAACTGCAAAGACATCAGAAGAATCTTCTTCAACTAGTGATAGAAAAATAACTGGACCGGATGCAGTAGTATCAGCTACACAAGTTCCAGTGCAGAAACCACCAAATAGGCGTAAGCTGAGTTTGAAGAAAAGTTTACAAGAGAGATCTAAATCTTCTGAAGCCACTCATGAGAAGCCAAATAGCTACGAAACTAATTCAAAACATGAGTTGTTAAAGGAGCAAGTTTCTACTTGTCTGTCACATCAATTGGTACGTCGAAGGTGCATATTTGAATGGTTCTACAGTGCTATTGACTACCCCTGGTTTGCGAAGATGGAGTTCATTGATTTTCTAAATCATCTGGGGATTGGTAACGCTCCAAGACTTACTCGTCTTGAATGGAGCGTCATTAAAAGTTCTCTTGGTAGAACTCGGAGATTCTCTGAGAAGTTCATACAGGAAGAGCGGGACAAACTCAAACAGCATCGCGAATCTGCGAGAGAGCATTACACAGAGATACGTGCAGGTGGTGCAAGGGAAGTGCTTCCTAGAGATTTTGCTCAGCCTTTATCAGTGGGGAACAGAGTCATTGCCGTACATCCCAAAACACGGGAAATTCGTGATGGCAAGATTCTTACTGTTGATCATAATAACAAGTGCAAGGTTCTGTTTGATGACTTGGGCGTGGACTTAGTTATGGACATTGATATCATGCCTTTAAATTCGTTGGAATACATGCCAGACGGTCTGAGGAGGCAAGTCGAAAGCAAAGAAGCAGAGGTCAACAGACGCCCAAGATCTGATGCATCTGCTCTGTTCCCTCCGTCTGTGCTTGAAAATATAGACTTTTCCATGATTCCTCGTAAGAAACAGGATGATAGGGACACTACTGATCAATCATTTAACACAGCTGATAACAAGACAAGACAAGGTGAAATTCGACGAGCTCTGATGTTGGAGGATACTTCAGATGCAGAGAGCTGGTCTCCCTCAGACACTGAAGGTTTGATGATGCCTTCAGAGCTTATTGCCTCTTGTATTTCAACTTGGCTCATGATTCAGAGGTGCACAGAGAAGAAGTACCCACCAGCTGATGTAGCTCAGGTGATGGAGATAGCAGTGAGAAGCTTGGAGCCACGGTGTCACCAGAACATGCCGGTCTACAGAGACATTCAGACTTGCATGGGATGGATCACGAATCAAATCATGACTCTTCCGAGAATCGCCGTCGCCGTCGTCGTCGTCGACAGCGCAGAGAGATATAAAGCTGCTAATCAGAGGGCAGTGCAACTCCTGGAGAAGTGTGGAACAACCCAAGTTGAAGTAGATGCTAGTGGTTCACTAACTTATCCTACAGAGAAAGTTGATGCAGGAGGAGATCAAGGTGATAAGAAGCTTAAGCCTTTGAGTGTTGATGAGGAACGGTTCATGAGAGCTTTTTATGAGGCGAAGGTTCAAGAAGTCTGCAGTGCCTTTGAGTTTCCTCACAAGATTCAGGCAACAGCTCTGCAATATTTTAAAAGATTTTATCTGCAATGGTCTGTTATGCAACATCATCCCAAAGAAATAATGTTAACCTGCGTGTATGCAGCCTGTAAAATAGAGGAGAATCATGTATCTGCTGAGGAGATAGGCAAGGGGATTAAACAAGATCACCATAGTTTGGAATTTGATCTGATTGTTTATGCACCGTATCGTGCAATCGAAGGCTTTGTCAGCAACATGGAGGAATTTCTTCAAGCTAGAGATGATGAAATCCAAAAGCTGGAGAGTTTGCTCAAAGCTGCAACAGCAGAAGCCGATAAAATTATGCTCACAGATGCTCCACTCCTCTTTCCTCCTGGCCAGTTGGCGTTGGCTGCTTTGCGTATTGCAAATGGGGTTCTTGGAGTGGTTCTAGAGAACATTGTTTCTCAACCGAACTCTGAGCACACAACTTCAGAGCTCATAAAATTACTAGATGACGTTGAATATTTGGTAAAGAACTATAAGTACCCAAGTGAAAAGGACATGAAGCATATCAACAGGAAGCTAAAATCTTGTCTAGGACATAGCTCTTCACATGACGAGAGTAAGAAACGGGAGAAAAGATCGAAGCACAAGTCACATAAGAACTCCAGTGATACACCAAAAGGTCCACCGATTGGTTGA
Protein Sequence:
- >RrC2295_p2|Raphanus_raphanistrum|MYB_related|RrC2295_p2
MAPSRTSKSVYKRSTREPSPQRDLRNSSKTKPRRKILTDKLGPHWTKGELERFYDAYRKHGRDWRKVAAAVRNSRSVDMVEALFNMNRAYLSLPEGTASVAGLIAMMTDHYSVIEESESDEEGHGASGLSMKYQKRKLAKLPSSDFREEVYPPHQVASAEGCLSFLKLTQTYGMERRAAGKRTPRFPVPSEYQRDDREVSMPPNKRAKKQLEADDDDTLALALANAARRGGGSPHRRAEGNRSTPNGKMSQAKEAQSKHRASSMVRNVVIIGRDRRHIKGAPDGDVALLMDTEGVGTVEVPQKGKNVRFEEAEGDASDDRGKACNANEGLKSGDEFEALQALAELSALLSSDGLKESESNPRLKEDNRIANNVDEKPNTPETFVRSYHRRKSKQAGPEEDSLLPAISAADASNQQIIDANAVSIGELGTSKRKRKTLHNKESAEDDNLKTLIKKARRADQSPPKQLRTAKTSEESSSTSDRKITGPDAVVSATQVPVQKPPNRRKLSLKKSLQERSKSSEATHEKPNSYETNSKHELLKEQVSTCLSHQLVRRRCIFEWFYSAIDYPWFAKMEFIDFLNHLGIGNAPRLTRLEWSVIKSSLGRTRRFSEKFIQEERDKLKQHRESAREHYTEIRAGGAREVLPRDFAQPLSVGNRVIAVHPKTREIRDGKILTVDHNNKCKVLFDDLGVDLVMDIDIMPLNSLEYMPDGLRRQVESKEAEVNRRPRSDASALFPPSVLENIDFSMIPRKKQDDRDTTDQSFNTADNKTRQGEIRRALMLEDTSDAESWSPSDTEGLMMPSELIASCISTWLMIQRCTEKKYPPADVAQVMEIAVRSLEPRCHQNMPVYRDIQTCMGWITNQIMTLPRIAVAVVVVDSAERYKAANQRAVQLLEKCGTTQVEVDASGSLTYPTEKVDAGGDQGDKKLKPLSVDEERFMRAFYEAKVQEVCSAFEFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACKIEENHVSAEEIGKGIKQDHHSLEFDLIVYAPYRAIEGFVSNMEEFLQARDDEIQKLESLLKAATAEADKIMLTDAPLLFPPGQLALAALRIANGVLGVVLENIVSQPNSEHTTSELIKLLDDVEYLVKNYKYPSEKDMKHINRKLKSCLGHSSSHDESKKREKRSKHKSHKNSSDTPKGPPIG