Information report for PSME_00043429-RA
Gene Details
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Functional Annotation
- TrEMBL: M4Q9T9 — M4Q9T9_PICAB; CCA1-like protein
- GO:0007623 — Biological Process — circadian rhythm
- GO:0009734 — Biological Process — auxin-activated signaling pathway
- GO:0010600 — Biological Process — regulation of auxin biosynthetic process
- GO:0003677 — Molecular Function — DNA binding
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PSME_00043429-RA|Pseudotsuga_menziesii|MYB_related|PSME_00043429-RA
ATGAAGATGTCTTTGCCTTCTAATATTCTTACTCTCAGCGGGGATTCGAATTCGAATTCCAATTCGATCTGTTCTTCAGGAGACGAAATTGCTACAAAGGTGAGAAAACCATATACAATCTCAAAGCAGAGAGAACGGTGGAGCGAAGAAGAGCATCTCAAGTTTCTGGAAGCCCTGAAAATGTATGGGCGAGCCTGGAGGCGAATTGAAGAGCACATAGGTACGAAGACAGCTGTCCAGATACGAAGCCATGCTCAGAAATTCTTCTCTAAGTTGGTAAGGGGATCTTCAGGCAAAGGCGTGTCTTCCACAGAGAGAGCACAGGATATTGAGATTCCGCCACCTCGGCCTAAAAGGAAACCAAGGCACCCTTACCCCCGTAAAGCAGCAGGAACTGCTCATCAGGGAGGGTCGCCAGCAAGTAAAGAAGGGGATGTCTTGCCTTCAGTTGTTTCATCTGTGCCTTTACTGAGCCTGGGAGATGGACCTTGCAAGCGTGCCCGATTTGATCAACACAATGCAAACGAAAGGATTTCAAACAGTAATAACGGGCAAGATGTCAAAATGGAGTCACCTAGAAAGAACAGCACTCCATTGAGTCTCAAGCTTTTTGGCCAAACAATGTTGGTCTCTATTGAAGGGCCAAATACTTCCTCTACTGAACCAGATCTAAGTAACGATCAAGAAGATATTCAGGAATTTGTTTTGGTGCAACAAGAAACCAGTTCTTTGAAGACTAAAGCCAAGAATCAAATATTGGACGATGGAGATGAAATCCTGCACAGATATAGTCAAAATTCTCAAACCACTGCTGCTGTAAACTCAGTCTTATATTCTGGATCTGTATCAACTGCAGACAGGGATTGCAGAGAAAAAACAGACTCAGATGAACAAATTTCTAGTGAATTGGACACCAATTCAAGTTGTGTAACTAGAAATCAAGAATCTCCAAGCATTTTCTCAGGGTACCCAAGGCATGTCCCAGTGCAGTGTGTCGTAGATGGAGCGGTTTCAGAAAATGTGAATGAGGTTGTTAACGTGACACCTTTGGGTCATTCAGCTTTGGCGATGAGCATGCCTGATAACACATCCTCATTGTCCAAGGCTGAGATCATAAATCCATGGCCTTCTACCTTTTCTCCAGTATTTCCTTGGGTTCAGATGCAGCATGGAGACACAGCTGTTGCAGTAGCGACAGTTGCTGCAGCCTCAGCATGGTGGTCCTTGTATGGTGCTGTGCCCTCTCTTCTCCACCCAAGAATGTTTTCAGGAGCCACGGTTCCAGAGAATATTTCATCTGCATTCAAAACTGAAACTGTGATGGGAACCAGAGAACAAAACCAGTCAAATATGACTGAAAGAGAAGGCGAGACCTTATTACGAGGTTCACCATCTGAGAACTACACATCCACTCTTATAGAAGAATCCAATGATGCACAAGGTCATGAAGAAAAACAAAGTTTCCAAACCGGAGAAGAGGACCAAATAATGATAGAGACAGAGTTAGGAAAAGAGAGGTCACAGTGTGCTTCAAACACACCTTCAAGCGATGATTCTGAAATTGATCCTTACTCAGGGACTAATATTCATGAGATTACAAGAAATTGTGTACAGGGTTTCCAATGTAATGGGGGAGGATATGTTCCTGAAGCAGAAGAGGGCTCATCCATAGATGAGGAAGAAATGCGTTACAGCAACAATCTATCAACAAAGCAAGGTGGATTCAACAGGGCAAAAACATGTATTCAGAACAGTAGAAACAATAGTTGTTCCAGAGTTGGTGGCCATTTCAATGATACGTGGAAGGATGTTTCGAGTGAGGGTCGAATTGCATTCAGAGATTTGTTTGCACAAGAGGTTTTGCCTCAGAGCTTTTCCCCTGGAGATGTCAAGTTCTCCAAAATAAATGGCAGCGATTCATTTTTTAGGGATTCAAAGCAAAAGGCAAGCAGAGGTATTGAAGGTGAGTTGTACCCTCGTGTCCAAGGTAGTGGAATCGGCGAGGAACAAACGTACACAGGCAAAGGACATACACAGAGTCCGAAATCTCCTTTTGTCTCAATTTCCAAGGAGAAGGTGCTGGAAGATTCAGACGGTGCTGTCAGCCATGGGCTGCTGGAAGCATCGGCCGTTAATTTTTGCAAAGGCAACAAATTCATTGCTTCAAGCTTTGGAAAGTCAAAGTCTGGTGTGGGTTTTGTCCCATATGAGCGATATGAGCGATGTTCAATGCAAGCAAGCAAAAATGGATTGCAGCTGCGATTCCAGGAAACCAAAAACTGTGAAGATGTTTTAAGAGATGAAAAAAGAATCTGA
Protein Sequence:
- >PSME_00043429-RA|Pseudotsuga_menziesii|MYB_related|PSME_00043429-RA
MKMSLPSNILTLSGDSNSNSNSICSSGDEIATKVRKPYTISKQRERWSEEEHLKFLEALKMYGRAWRRIEEHIGTKTAVQIRSHAQKFFSKLVRGSSGKGVSSTERAQDIEIPPPRPKRKPRHPYPRKAAGTAHQGGSPASKEGDVLPSVVSSVPLLSLGDGPCKRARFDQHNANERISNSNNGQDVKMESPRKNSTPLSLKLFGQTMLVSIEGPNTSSTEPDLSNDQEDIQEFVLVQQETSSLKTKAKNQILDDGDEILHRYSQNSQTTAAVNSVLYSGSVSTADRDCREKTDSDEQISSELDTNSSCVTRNQESPSIFSGYPRHVPVQCVVDGAVSENVNEVVNVTPLGHSALAMSMPDNTSSLSKAEIINPWPSTFSPVFPWVQMQHGDTAVAVATVAAASAWWSLYGAVPSLLHPRMFSGATVPENISSAFKTETVMGTREQNQSNMTEREGETLLRGSPSENYTSTLIEESNDAQGHEEKQSFQTGEEDQIMIETELGKERSQCASNTPSSDDSEIDPYSGTNIHEITRNCVQGFQCNGGGYVPEAEEGSSIDEEEMRYSNNLSTKQGGFNRAKTCIQNSRNNSCSRVGGHFNDTWKDVSSEGRIAFRDLFAQEVLPQSFSPGDVKFSKINGSDSFFRDSKQKASRGIEGELYPRVQGSGIGEEQTYTGKGHTQSPKSPFVSISKEKVLEDSDGAVSHGLLEASAVNFCKGNKFIASSFGKSKSGVGFVPYERYERCSMQASKNGLQLRFQETKNCEDVLRDEKRI