Information report for PSME_00034773-RA
Gene Details
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Functional Annotation
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn286431, Achn190451
- Brassica napus: GSBRNA2T00155753001
- Brassica oleracea: XP_013605118.1, XP_013605117.1
- Gossypium arboreum: Cotton_A_07767_BGI-A2_v1.0
- Gossypium hirsutum: Gh_A09G1194
- Manihot esculenta: Manes.06G169700.1.p
- Populus trichocarpa: Potri.009G023100.3
- Pyrus bretschneideri: Pbr004975.1, Pbr028848.1
- Ricinus communis: 30169.m006375
- Solanum lycopersicum: Solyc01g073950.2.1
Sequences
CDS Sequence:
- >PSME_00034773-RA|Pseudotsuga_menziesii|MYB_related|PSME_00034773-RA
ATGGAGACGGAGAATAACAATAATAATAATAACAACAATACTAAGAGCAAATGGGGGACATGGGAAGAATTGGTTCTGGGAAGTGCAGTGAAGAAGCATGGAGCAGACAATTGGGATAAAGTTTCGCTGGAGCTTCAGGCTAGAAAGCTCTCCCCATACGTTTTCTCTTCAGAGGATTGCAAGGCCAAGTATCATGCCTTGCAAGGCAGATTCAAGAACAGCCATGGCAATAGTTGCAGCAATAGCTTGCCATGGCTGGACGAGCTGAGGAAGTTGAGGGTGGCTCAGCTTAAGAGGGAGCTTGAGCGCTATGACGGTTCTATTGTATCTCTGGAATCTAAGCTGAAGAAACTCAAGACCGAGAGGGAACAGAGCTTGCTTAAGGAACAGCAGAAGACGACAGAAAAACATACGTCCGAACAAGAGAAGGAGAGAAGTCCCGAAGAAGAAGGTAAGGATGGGTTTCAAATGTGCCCTGAAACTGACCCAACTGCCCCTAAAATGGAGGATGGCAAAATTGAATCTTTGGATAACCCAAATCGTCCTTTGGAGAACCCAGATCCGGGATCTGGTAACCCAAAGGAAGATTTGGGATCTAAGGAGGCTTTGGTTGTGCATGACGAGATCCGTGACGAAAACCCACATGGTGAACAAGATCTGCCCTTGGAAAGCGTTCAGCCCCCTTCTGCTGAAGAGCCCGTACCGCAGCAGCCAGATGGGAAAACCCTTGACAAGGAACCGGCCAAGCCTGAGACTCTATCTGGGCCTGCATCTCCTCTGGATTCGTATTATGGTAGCTCTGAGACAATAGCAAAGGAACACCCCAATAGGATGGGTTCTGAACAAGAAGATGGGATGGGTTCTGAACAAGAAGATGAAGAAGAAGAAGATGATGATAACGATAATAATGATAATGATAGGATGGGTTCTGAACCAGATGATGATGATGACGAAAATGATGCAAGGGAGCAGGTCTGCGCGGAATCTACAGACGTCCACTCTGAAACAGTTGTGGACATGAAGGACAGTGGATTCCAAGAGTGCAGCGCCGAGTCCAGAGAAATTGGGGAGGAAGAGGGCAAAGGAATCTGTGAAAAACGATGCGACAGGGATGCAAGGCTACAACCTTGGGACTCTAATGATGTATTGAGCTCTGCAGAATTGTCAACTAGGAGAAAAGATGGTAGGAAATCTTCCAGTACCAGCCATGATGCCAGCGAAACTGTTCGCGGGCATTATAAAGATTATGAAGATTCTGTGGGAGCTTGGCAGCATCAGGCCACAAGGTCTTCCGGTGACAGTCAGGTTGAAGGAACTGATGAGATGTCACCAATGAGCAAGAGAAGCAGAAGGGAGGCCAAGGTTCCAGGCAAATTGCTCCCTCTTCTTGAGTGTTTGAGGGCTATCAGTGCCCACAAGTTTGGTTCCATCTTCAAGCATAGGCTGGAAAGCCAGGATAATCTGTACTACCAAAGCATGATTCGGAGGCATGTCGACTTGGCAATGGTGAGGTCAAGGCTAGAGGAAGGTTCTTACTCTGGCAGTGTAGAATTTTTCAGGGATCTGCTTCTGGTGTTCAACAATGCACTCGTGTATTATCCAAAGTACTCTCCGGAGTCTGGTGCTGCATATGTACTTCGTGAATTGGCCACCAAGGAGATGACAACCATATTTCAGACAGAGGCCCTTCTGAAACAAGAAGGCCCCTCCACGAGAAAGAGAGAGCCAAGGAAGCTTCCAGAGTTTTCCCTGTCTGCCAAGCCTAATCCTACTCCCATGGTTTCTTTCAGGAAGAGAAATGCAAGCACATCTCATGGCGAATATCAGGTGAGTGGTCCAAAAGGTGCACATTCAACCTTGGAACAATCGTCTCCATGTGTCATTCAAGTGCAGCAACCACAACAAGCTGAAAAGAGAAAGGAGGATGAAACAAAGGATGACAAGGTTAAGGGAAACAAGATTGGCGAACACAAAGTTGTTGAAAGTTCTGCATCTCCATCTATGACCCAGATTCTGGAGAAGCAGCGAGAACAGAAAACTGATGCTGCCAAGTTAAGAACAGCTGCTAACTCATCTGCAGGCAATGCCAGTGGACAGAGCAAACTAGATAAATTTGCTGTAGAATCCAAGGAGAGAATCAGGGATACCCAATATCATGGGGAACCAATCATGACCTCTGTTAACAACAACCATCAAACAAAGAAAACCACAATCAACAATAAAATTGAATTGAAAAAGGGTCCCAGCAGCAAGCATGATCTGGAAAAGAATTCCAGTGATCTTCTTGCACCTATGAAGAGCTCCAGTGGCTTTTTTAGGGCGAAGAAGAGCTCTGCCAGCACTGCTGAACCAATTAAGAGCTCTAGCCACATTATCGAGACAAACAAAAGTTCTGGCAACATTGCCAAGCCAATTAAGAGCTCTAACACAGTTGAGCAGGAAAGGATCTCAAGCAACGCTATTAGGCGAGGCAGAGAACTGAAGAATAAAGAGCAACAGGATAATTTGTCTTTGAAGCCTCCTCTGAAACAACCATTAGCATCTACTACTACCACCACCAGCACCACCCACGAACAGCCTCTCATAAAACGAGGAGTTGGAAGGCCACCAAAGCATGCTAAGCAAGCATCTCAACAACATAAATCTCAACAACCACTGGGACAGAAACAACAAGTACCTGAACTGAAAGCCACAGAATCTGAGCTACTACTTCCAAGACCAAGAAAAAGGTCTAGAACTTGA
Protein Sequence:
- >PSME_00034773-RA|Pseudotsuga_menziesii|MYB_related|PSME_00034773-RA
METENNNNNNNNNTKSKWGTWEELVLGSAVKKHGADNWDKVSLELQARKLSPYVFSSEDCKAKYHALQGRFKNSHGNSCSNSLPWLDELRKLRVAQLKRELERYDGSIVSLESKLKKLKTEREQSLLKEQQKTTEKHTSEQEKERSPEEEGKDGFQMCPETDPTAPKMEDGKIESLDNPNRPLENPDPGSGNPKEDLGSKEALVVHDEIRDENPHGEQDLPLESVQPPSAEEPVPQQPDGKTLDKEPAKPETLSGPASPLDSYYGSSETIAKEHPNRMGSEQEDGMGSEQEDEEEEDDDNDNNDNDRMGSEPDDDDDENDAREQVCAESTDVHSETVVDMKDSGFQECSAESREIGEEEGKGICEKRCDRDARLQPWDSNDVLSSAELSTRRKDGRKSSSTSHDASETVRGHYKDYEDSVGAWQHQATRSSGDSQVEGTDEMSPMSKRSRREAKVPGKLLPLLECLRAISAHKFGSIFKHRLESQDNLYYQSMIRRHVDLAMVRSRLEEGSYSGSVEFFRDLLLVFNNALVYYPKYSPESGAAYVLRELATKEMTTIFQTEALLKQEGPSTRKREPRKLPEFSLSAKPNPTPMVSFRKRNASTSHGEYQVSGPKGAHSTLEQSSPCVIQVQQPQQAEKRKEDETKDDKVKGNKIGEHKVVESSASPSMTQILEKQREQKTDAAKLRTAANSSAGNASGQSKLDKFAVESKERIRDTQYHGEPIMTSVNNNHQTKKTTINNKIELKKGPSSKHDLEKNSSDLLAPMKSSSGFFRAKKSSASTAEPIKSSSHIIETNKSSGNIAKPIKSSNTVEQERISSNAIRRGRELKNKEQQDNLSLKPPLKQPLASTTTTTSTTHEQPLIKRGVGRPPKHAKQASQQHKSQQPLGQKQQVPELKATESELLLPRPRKRSRT