Information report for PSME_00006400-RA
Gene Details
|
|
Functional Annotation
- Refseq: XP_008806734.1 — protein ALWAYS EARLY 2-like isoform X2
- TrEMBL: A0A2H3Z191 — A0A2H3Z191_PHODC; protein ALWAYS EARLY 2-like isoform X2
- STRING: XP_008806732.1 — (Phoenix dactylifera)
- GO:0005730 — Cellular Component — nucleolus
- GO:0016592 — Cellular Component — mediator complex
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PSME_00006400-RA|Pseudotsuga_menziesii|MYB_related|PSME_00006400-RA
GGAGGTTTGATCAACATAACGAAAATGGCTTCTTCAAGGAAACCGAGAATTGCTAGCAGGCGCACTGGTAAAGCCACAGAGGGAGCTGCTGAGAAAGATGACGATGGTACATATAAAAACAGGCAACGGAAGCGCAAATTGTCTGATATGTTGGGTCCACAGTGGAGCAAGGAGGACTTACAGAATTTCTATGAAGCCTATCGGAAGTATGGAAAGGACTGGAAGAAGGTGTCTGCCATGATCTGTAACAGGACAATGGAGATGGTGGAGGCTCTTTACAGTATGAATAAGGCTTACTTGTCTCTTCCTGATGGAGCTGCTTCTGCGGCTGGGCTTATAGCAATGATGATAGACCACTACAATATCTTGGAAGGAAGCAACAGTGACAGGGACAGCAGTGATGGCTTTGGAGCATCAGGACTCCCTCAAAAGCAAACCCGTTTTAAGAAGAAGTTTACTAGTACAAATAACTTCGACAGATCTTATTCTGATTTGTTGCAATGTAGATCAGGACCTTCAAATTATGGCTGTCCATCTCCAGTGAAGAAAAGGAGGTCTGGAGGTAGTAGGCCCCGTGCTGTTGGAAAAAGAACACCACGCTTTCCTGTTTCATATGCACTGGAAAAGCAGAATTCTGAAGCAGTGCTGTCTGGTAAACAAGGGCTTGTCTCTGATGATGATCATGATGATTATGATGTTGCTAAAGCAGTTGCATTGACATTGGCAGAGGCTTCACAAAGAGCAGCCTCTCCTCAAGTGTCGCGAACACCTAGTCGGATAACATCACAAATGCGATTATCTCCTGTCCAAAATGGTGATTTGAAGGGTTCATATGCTCGGAATGAGTCTGGAGGATCTGCAATCAAGCTTACTGGATCTACAATGGATGAAGGTAGCCCAGAAGGTAGTCAAGAAAGCAAAGAAGTAGGAAATGGAGGTATTACAAAGACAGATGAGCAGATAATACCAGGAGAAACTAGGATGAAAGCTGCACATAATCTCAAAAGTAGAGTAAGGAAGCCACCTTTAAAGAAGTTCAAGACACATGGGTTGAAGCAAGAATGTATTGATGATGTAAAAGAAGAGTTCAGCTGCACTGAAGAGGGTGTTGGAGTGAAAGATGAAAAAGATGAATTAATGGACACTGAAGCAGATTATGGCAGGAAAAGGAAAAAGCCACTCCCACAGAGGTCAAGAAAGAGAAGCAGGCAGTTGTTTTCTGGAGATGAAAATTTTGGGCTGGATGCCTTGGCTACTTTGGCAGATTTATCTCTAAATGGACTGTTGCCATCTCCAACTGTTGAATCTGAGTCATCAGCGCAAGTGAAGGAAGAGAAGGATAACACCATACTAGAAAAGGGTGATAGGAATGCACGACAGGTCAGAGTACTTGACCTTCATGAGGAGAAACCTAGAATTTCATCAAATCGAGAAAGAGGATCACTATACAAGGCTTCTGTCAATAGTGTGGAACTGGTGACAAAGGAAAAGCATCATGAAGATGGGAAAACGATTGTCTTGGAAGGAGGGCATGTCAGCCCTGTTGCTGACATAAAGAAGAGGAGAAGGAAACCAACTGCACCAAAAGTTCAGCAGCTGGAAGCATTAGGTGAAACTTGTTCAGGAGAGATTCAAAAGTTGGAGGCTTCAATTGGAGATGGAGCAAAGTTTCGAAATAAGCCAAAGAAAGCATCAAACACTCATACCATTTCTAAGCAGGGTAGACTGGCAAAGACTCTTCCTATGTCTGCCGAAGATCCTGAATTCACTGGATCAGGTGGGCCTGTGTCAGACCCGGGAATACAAAATTCTACTGCAAGTCAAGTTAGTTTACCAACAAAACTTCGAAGCAGACGCAAAATGGCTCTAGAAAAGGTTCTGGCATCAAAGCCCGTGGAATGTCCAGAAAAATGTGAGAACATTGTATGCAATGAACAATCTGAACGACAAAACAATGTGACTGTGTTTTGTCCTCATACGGTTACAGACAGGGCATCGAGCTTGAAGGCCAAGTTTATTCATTGCTTATCATCTGCTAAGCTGCGCCGTTGGTGTACATATGAGTGGTTCTATAGTGCCATTGATTGGCCATGGTTTACTCGAAATGAGTTTGTGGAGTACTTAAATCATGCAGGCCTTGGGCATGTTCCTAGACTTACTCGTGTTGAATGGGGTGTTATACGCAGTTCACTTGGAAAGCCACGCCGACTATCTAAAAGATTCCTTCAAGAAGAAAGGGAGAAATTGGAACAATATCGGGAGTCAGTTCGGAAGCACTATAATGAAGTACGGGCTGGCATTTGTGATGGTTTGCCCACAGATTTAGCTCGGCCTTTATCAGTAGGACAACGTGTTATTGCTTGTCATCCAAAATCAAGAGAAGTCCATGATGGTAATATTTTAACAGTCGATCGGAACAGATGTAGAGTTCAATTTGACAGACCAGAATTGGGTGTTGAATTTGTGCTGGATATTGATTGCATGCCTTTGAACCCGTTAGAGAATATGCCAGAAGCCTTGAGAAGAAAAAGTATGGTCTTGGATGGTCTGGGCCAGACTTTTGACGACTCTCAACTGGAAATGAAATCTCGAGGATTGGGTGTGGGTGTTTCTCCAAAGACTATCCAGAACGACAGAGTGGATAAATCAGCGGCAGACTCTTCTTTTGGGCCTCCTTCTAAATATTCTTTTAATACTCTTTTGAAGCAGGCAAAGGGTGATACGGTTGATTCTGTTATACAAGCAAAAGCTGCAGCAAATGAAGTCGTTGTAGCTACCCAGCAAGCATTGTATAACCAGCCTTGTACACTAGCACAAATCCAGGCCAAGGAAGCTGATATCCGGGCACTAGCTGATTTGACTCGTGCACTTGATAAAAAGGAAGCAATTTTAGTAGAATTGAGAAATATGAATGATGAAGTTGATGGTCACAAGAAAAATGCAGAGGCCATGAGAAACTCAGAGAACTTCCGGAAGCAGTATGCAACTGTTGTTCATCAGCTCAAGGATACAAACGAGCAGGTTACTTCAGCTCTTGTGTACTTGAGGCAACGGAATACATACCAAGAAAATTCGATACCTCCATGGCATCGTGTGATTCCACTTCCTGTGGCTGTTGGAGGTTCAAGTTCTATGGATCCAAGTGCTCCTATCACATCGGAAACATGTCCACAGATTGGGGAGATCATTAATAATTCAGGGAGGAAAGCAAGGATGCTCATAGATGCTGCAATTCAGGCAATGTCATCTTTGAAGGAAGGTGATGACAAGCTTGCAATGATTGGTGGATCATTAGATCCGATGACTTATGTACATGCTGGTGTTGATTCTGGCAACATGGGAGTGAAATCAGGACATCAATTTGATTCCAGCAGATGCGCTGATCAGGAAACATTAAGTCTCTGTGAGAATTCAACAGCCTCATTGGGATCTGAATTAATAGCAGATAATGCTACTGATGTTCAACAGAAAGGTACTTTGTATAGGAAGGAGGCACCGGTACTGTCTGAGCTCATCGCATCATGTGTTGCTGCCTTATTCACGATTCAGACTTGTACAGAGAGACAGTATCCACCATCTGATGTGGCACAGATGCTGGACAATGCAGTTACAAGTTTACAACCTTACTCCAGCCAGAATCTTATTATCTATAGAGAAATACAACAATCCATGGGTGTTATTAAGAATCAAATTCTAGCACTGATACCAGCTCACACAAGCATTTCTGTTTCTACAGAGATTCCTGCTGTGCCAAGAAAATAA
Protein Sequence:
- >PSME_00006400-RA|Pseudotsuga_menziesii|MYB_related|PSME_00006400-RA
GGLINITKMASSRKPRIASRRTGKATEGAAEKDDDGTYKNRQRKRKLSDMLGPQWSKEDLQNFYEAYRKYGKDWKKVSAMICNRTMEMVEALYSMNKAYLSLPDGAASAAGLIAMMIDHYNILEGSNSDRDSSDGFGASGLPQKQTRFKKKFTSTNNFDRSYSDLLQCRSGPSNYGCPSPVKKRRSGGSRPRAVGKRTPRFPVSYALEKQNSEAVLSGKQGLVSDDDHDDYDVAKAVALTLAEASQRAASPQVSRTPSRITSQMRLSPVQNGDLKGSYARNESGGSAIKLTGSTMDEGSPEGSQESKEVGNGGITKTDEQIIPGETRMKAAHNLKSRVRKPPLKKFKTHGLKQECIDDVKEEFSCTEEGVGVKDEKDELMDTEADYGRKRKKPLPQRSRKRSRQLFSGDENFGLDALATLADLSLNGLLPSPTVESESSAQVKEEKDNTILEKGDRNARQVRVLDLHEEKPRISSNRERGSLYKASVNSVELVTKEKHHEDGKTIVLEGGHVSPVADIKKRRRKPTAPKVQQLEALGETCSGEIQKLEASIGDGAKFRNKPKKASNTHTISKQGRLAKTLPMSAEDPEFTGSGGPVSDPGIQNSTASQVSLPTKLRSRRKMALEKVLASKPVECPEKCENIVCNEQSERQNNVTVFCPHTVTDRASSLKAKFIHCLSSAKLRRWCTYEWFYSAIDWPWFTRNEFVEYLNHAGLGHVPRLTRVEWGVIRSSLGKPRRLSKRFLQEEREKLEQYRESVRKHYNEVRAGICDGLPTDLARPLSVGQRVIACHPKSREVHDGNILTVDRNRCRVQFDRPELGVEFVLDIDCMPLNPLENMPEALRRKSMVLDGLGQTFDDSQLEMKSRGLGVGVSPKTIQNDRVDKSAADSSFGPPSKYSFNTLLKQAKGDTVDSVIQAKAAANEVVVATQQALYNQPCTLAQIQAKEADIRALADLTRALDKKEAILVELRNMNDEVDGHKKNAEAMRNSENFRKQYATVVHQLKDTNEQVTSALVYLRQRNTYQENSIPPWHRVIPLPVAVGGSSSMDPSAPITSETCPQIGEIINNSGRKARMLIDAAIQAMSSLKEGDDKLAMIGGSLDPMTYVHAGVDSGNMGVKSGHQFDSSRCADQETLSLCENSTASLGSELIADNATDVQQKGTLYRKEAPVLSELIASCVAALFTIQTCTERQYPPSDVAQMLDNAVTSLQPYSSQNLIIYREIQQSMGVIKNQILALIPAHTSISVSTEIPAVPRK