Information report for Pp3c7_20880V3.2.p
Gene Details
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Functional Annotation
- Refseq: XP_024380572.1 — uncharacterized protein LOC112284704 isoform X1
- TrEMBL: A9RCZ8 — A9RCZ8_PHYPA; Predicted protein
- STRING: PP1S2_311V6.1 — (Physcomitrella patens)
- GO:0031627 — Biological Process — telomeric loop formation
- GO:0000783 — Cellular Component — nuclear telomere cap complex
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_24231
- Glycine max: Glyma.04G004700.1.p
- Manihot esculenta: Manes.09G026400.1.p
- Populus trichocarpa: Potri.016G053300.1, Potri.016G053300.2
- Solanum tuberosum: PGSC0003DMP400041042, PGSC0003DMP400041041, PGSC0003DMP400041040
Sequences
CDS Sequence:
- >Pp3c7_20880V3.2.p|Physcomitrella_patens|MYB_related|Pp3c7_20880V3.2.p
ATGGACGCTCGTGTTAGCTCGACACAGTCGCAGGTAGAGGCCTCGACGCCCGGGCTTGCGTGGAAATGGATTTTGCAGAAGCTTGCGGACGTTCCGGAGTTTGGAGTGGCGTTTCTCAACGAGCTGATTACCACTCATGTGAAAGACACAGAGGAGGCGCATTGTTGGCCTTTTCTGGAGAGAGTAGCTTTACGGAACCTTGAGGAGCTGGTTGTTTCGAATCAAATCGACTCCGATGTTATTCCTCTCCTCAAGGCACTCATTGGGCAAGACATCAGTTCAGTTACAAAAGGTTCCTCTGTCAAGCAACGGTTCAACAAAGAATTGGTTCTTCGTGTTCAAACCGAGGTAGTTCTTTCTGTATTAAGAGAAGATGTGAACAAGGGGGAGAGAGATTGGTCATCTTTCGCATCGGAACTGGAAAGAGTTTTTACAGAAGAAGCAGACAATGGTGTCTTAGATCGTAAAAGAGAGCTTAGTGCACTACTTAAGCCAAAGAACCAAACGGAAGCTGTTGTTGCAGCTTATTTCAACAAGTATTGTCTCAAAAAATTAAAGGATGACTTGTACACGTTCATTGATGAGAAGAAAAAATCATTCAAGCCAATGTTCTTAGACCAGTTGTTGCGTGACTTTCTTAGTTCCAACGGGACTCCATTTCCTGAGGAGCTCGGTGACGTGAAGAAGTTTAGAAAGGTGGACACACATGCTAATCAAGCGCATGTGGACACCGTCAACCTCGAGAGCTTACCAATATTGACGGGCGCACTCACAAATGCGAATATGAACCCTCAAAATGTGGAACATGAAGCTGGAAATGGGCTTGAATTTGATAAAACTGGAGATGAAAATATTGTGCATGGTCGCCGTGGTAGGAAAAGGCTGAGGCGGAAGGTGCTATCTGCTAATCATGATATTGGTGACGATGAACCCGAAGAAATGCAAGAGCACAATCCACGGATTAAAAAACCAAGAAGAATGATATCAACGTCCCCTGTTCATTCCGAGACTGTTCTCCATCAGGATGTTTCTGAATTGGCGTTATCAAAATCTATTTCTCTGAAAGATAACTCCCCTGCAAAGCATAGAGCCGAATCGTTAGAGCAGCGTTCATCATTGAAAAGAGGCAAGGAGGGTATGAGTGCATCTGGGAATTTTGGATTAAAATCAATGAGATGCTGCACACCACATGTAAGTGCTAGCATGGAAAAGTCAGAAGCGTATGTAGGGGAGCCAGGCCGTACAAATAAATGTCTTTCAGTCGCAGATGTCGAATCTGATGCTGAGACACAGGTAATGAAGGGGTTAAGCACCGATGGTGAGGAAGGAAACCTCATTAAAAGAAGTAACGGTGACGATCACCTCAAGGAAATGGCTGAGTCTTCATCTCATTCAGAGAGTGGATCAGACCAGGGAGATTCTCAAAAGATTGTGGCAACTGGGGTCGTAAAGAAGAAAACCTTAGGTTCACCAAGTCAAAGGAGTATATCGGTGGATAGAAGAAAAAAAGCCCCGGTTTTACCATCTGAAGATAAAATAGCTCAACAGAGGGATATTGAAAAGTTCTTGATAAAGAATGAATTCATACCTTTGGATGCTCAAGACATCTACAAGTTCGAATTTCTCGACGTTGGTGATGATGGTCATGAAGACGTATGCCACATGTGTGGCTTGCATGGGAAACTAGTTTGTTGTGATAGATGCCCCATCTCTATGCACTTTACGTGTACTGAGGTTCTTGATCTAAGATTGCCCAAGGACGAGGAGGAGTGGTATTGTCCTATTTGCGTTTTCACTAAGGCAGCTCAAGTGGCAGCAGAGGCCAATAAGGTAGCAGCTGCAGCCAAGGAGAAGCTGAAAACCTTCATGAAAGAAAGCATAAAGAAACAAAGTTCTTCTGAAGGCGATGCATTGCATCAGCTTAGGCAGAAGAAGACACAAAGTGAAAATATCGAGCAGGAGAGGACAGGAAATGAAAATATCAGGCAGAAGAAGTCAAAATCGTTGAGGAAGAACGGAGCTGGAAGTGTCTGGGAGTCGTCTGTAAAATGTCTGCTTTTTAACGAAGACGCGAAGAAAACTGAGAGGGCACCGAATACCCCTGATCAAAATATTTCAAGGAGACGGCTGCTTGCGGAGAGCACAAGTGGACAGAAAACGAAGGAGAAGGAAATTTCCGCACGCCCCTCGAAGAGTAGCGGACCTAAAGATGACAGTGGCGAGGAGCGTGTGGTACAGGAAGCTGGAGTCCAGGAATTAGGAAGTGGAGCTGGTGACTCCAGAAAGGTTGGAGGTGATAAACATGATGGAGACCTGGATGAAGACGGGGGTGAGAAGTTACAAAATTTGGATTGGGACAGATTCCTCAGTGGTCGTCGGAAATTACCAGGTTTCCGCAGGAGGCCCTTACCTTGGACGAGAGAGGAAGAGGACGCCCTCATGGAGGGTGTACGACGAATTTCAAATAATGGAGAGTGGGGTTTCCATTGGAAACGAATTCTGCAGTTTGGGAAGGGTAGGTTTGATCCTAGCCGTACTTATGGTGACCTGAAGGACAAATGGCGAAATCTTAGTAAAGGTGTTTCATAA
Protein Sequence:
- >Pp3c7_20880V3.2.p|Physcomitrella_patens|MYB_related|Pp3c7_20880V3.2.p
MDARVSSTQSQVEASTPGLAWKWILQKLADVPEFGVAFLNELITTHVKDTEEAHCWPFLERVALRNLEELVVSNQIDSDVIPLLKALIGQDISSVTKGSSVKQRFNKELVLRVQTEVVLSVLREDVNKGERDWSSFASELERVFTEEADNGVLDRKRELSALLKPKNQTEAVVAAYFNKYCLKKLKDDLYTFIDEKKKSFKPMFLDQLLRDFLSSNGTPFPEELGDVKKFRKVDTHANQAHVDTVNLESLPILTGALTNANMNPQNVEHEAGNGLEFDKTGDENIVHGRRGRKRLRRKVLSANHDIGDDEPEEMQEHNPRIKKPRRMISTSPVHSETVLHQDVSELALSKSISLKDNSPAKHRAESLEQRSSLKRGKEGMSASGNFGLKSMRCCTPHVSASMEKSEAYVGEPGRTNKCLSVADVESDAETQVMKGLSTDGEEGNLIKRSNGDDHLKEMAESSSHSESGSDQGDSQKIVATGVVKKKTLGSPSQRSISVDRRKKAPVLPSEDKIAQQRDIEKFLIKNEFIPLDAQDIYKFEFLDVGDDGHEDVCHMCGLHGKLVCCDRCPISMHFTCTEVLDLRLPKDEEEWYCPICVFTKAAQVAAEANKVAAAAKEKLKTFMKESIKKQSSSEGDALHQLRQKKTQSENIEQERTGNENIRQKKSKSLRKNGAGSVWESSVKCLLFNEDAKKTERAPNTPDQNISRRRLLAESTSGQKTKEKEISARPSKSSGPKDDSGEERVVQEAGVQELGSGAGDSRKVGGDKHDGDLDEDGGEKLQNLDWDRFLSGRRKLPGFRRRPLPWTREEEDALMEGVRRISNNGEWGFHWKRILQFGKGRFDPSRTYGDLKDKWRNLSKGVS*