Information report for Potri.016G053300.2
Gene Details
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Functional Annotation
- Refseq: XP_024443805.1 — uncharacterized protein LOC7484006 isoform X1
- TrEMBL: B9II56 — B9II56_POPTR; Uncharacterized protein
- STRING: POPTR_0016s05370.1 — (Populus trichocarpa)
- GO:0031627 — Biological Process — telomeric loop formation
- GO:0000783 — Cellular Component — nuclear telomere cap complex
- GO:0003691 — Molecular Function — double-stranded telomeric DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Potri.016G053300.2|Populus_trichocarpa|MYB_related|Potri.016G053300.2
ATGGTTGCTTTGAGATGCTTAGAGGATTTGTTTTGTCGTAGTGATAATGGAATTGCGAATGATGTTACTTCTAAAGAACTGAAAGTCACGTTTGATTTGTCGGAGAGTTGTGAGGATGTGCTCCAGTCCATACTGCAAGAGACATCAGTATCGGATTTGAATAGGGGTGGACCGGAGCTATTGAAATGGGATATTCACCCTTTCATTATGCATAAAAGAGCTTGCATGCCTAAATGTGCTTTGGAGAAGGTGAAAGATGCAATTCTTGAGGGTATTCATCCATATGCTTCATTGAAGGAATATAGTGAACTGGTGAATGCAAATGATAGGGGTAATAGAATCACTACAGATTATGGGGACGATGGTGCACCTGTGGGGAGGATAGGTGGGAGTGATACTGATGGACAAATTAACCCTCCTGAAGAAAGTTCCATTCCTTTGCTGCATGAAAATGAGAATGTAGTGGAAGACAATTCATATAACAGGAACTTGTTACACTTTGAGAGAGAGAGAAGTGGTTCGGCTAGTCAAAATCTGGCTGGAGACCATGAAGATCAAGGTTGTGTTGATGGTGACCATCTTCAGCCACAAGCCAAGAGGTTCAAGGAAGATGCCTTGCATGACAATCTGTCCATGGGACAAATTTCTTCGACTCCTCCACAGCACAAGGACATGGTAGAAGATTCATTTGAGATGGTGGTTGAGGATTCTGAAAACAGAGATTTTCACTTGGAAAAAGAATCTTCACAGGGAGGACTGGAAGGAAGCATACCTGTAGAGAACGATCATGATGAAGATGTTGGTATAGATAGGCATGGGCATAGTCTTGATGCTGACAATGCATTCCAGCACAATCAGCATGAAATTGCTCATAATGCCAACAAAATGCCACTATCTGGGGATGGACTCCATCAGTATAGCTTTGTGGATGAAATCAACCGTGCTGAACCTAGAAAATCAAATGCTGCACCATCTGTGGGAACCTCGGACAGATTATTTGTTAATGGAAACAAAGGCAAATCTGATCATAGTGGTCAACAAAAACCATCAAATAGTGTATCCTCAAATGGATTTCACAGGAATACTGATGCTGATGAAAGAGAAGCTGGCACAGACCATCTATCTGAAGAAGATGAGTCAAATGAGAGTGACGAGTATGAGCAGGAGAGGGTTGATGTTGGTTTGAGGAAGAGTCATTTTCTGAGTTCTCAATACATGTTAAGTCATGATTCTCTGGCAGAAGCTAACTGGACAGATCAAAATCTTTGCATAAAATGCTGTAAAGATGGTCAGTTGTTGGTTTGTGGTGCTGGTAGTTGCTCATTGGTGATTCATGAGAACTGTTTAGTTTTCTCACCACATTTTGATGAGAGGGGAGACTTTTACTGTCCTTTCTGTGCATATTCTCTTGCTATTTCAGAGTACCTTGAAGCTAAGAAAAAAGCCTATTCAGCGAGGAAGGAACTGAAGTTATTTATTGAAACGAGACAGGAGTATCGGTCAAACAAACATACTCAAAGACTACTTAGCAAAAGACATGGCAGCTCAAGACAGAATGAAGATAAGGATCTGCTTAATAAATTTCTTGATTATGAGAATTTGGTTGGAGAAAAACGCAAACAATCAAATAATCGAGGTCAGATATCTGAAGGTAATGACCATCAATTTCAGAAAGGAAAAGGGAAGAAGAAGCAAGTAGAGCCTTTGGCATCATGCATTGGTGTTAATTCGCTGTGTAGAGAAGAAGAGCCTGATGTAAATGTTAGGACTAATCATATATCTACGGTAGAAAAGGAAGGGGAGGAGGTGGTTCAAGAGAATTCATCTGGAACCGAACTTGACATAAATCAACACCAAGTTAGTGTTGATCCTAAATACAGTGTTGATAATCATTTGTGTAAAGAAAAAGAGATTGTCTCTGGAAGCCAGAGAACAGATGGTCGAAGACAGAAAGCTGTTTGTGCCATCAGCAGCGATGGAGGAGAAACCTCTGGTGACGAAGATGACAAGTCAATAAGTACTAATTACTTCATAAGATTCCGAAAGAGAGAGAGACAATATACCCCTGCAATGCCTCAGTCGAGGCGAAAAAAGGTTCCGTGGACAGCCCATGAGGAGGAGATACTCAAGGAGGGAGTGCAGAAATTTGCAAGTGACGGGAAATATCCCTGGAAGGACATTTTGGAGTATGGTAGTTCTGTATTTTCGAATGGCCGAACAACAATAGACCTCAAGGATAAATGGCGGAACATGTGCAAATTAAGCCCTAAATCCAAGTAG
Protein Sequence:
- >Potri.016G053300.2|Populus_trichocarpa|MYB_related|Potri.016G053300.2
MVALRCLEDLFCRSDNGIANDVTSKELKVTFDLSESCEDVLQSILQETSVSDLNRGGPELLKWDIHPFIMHKRACMPKCALEKVKDAILEGIHPYASLKEYSELVNANDRGNRITTDYGDDGAPVGRIGGSDTDGQINPPEESSIPLLHENENVVEDNSYNRNLLHFERERSGSASQNLAGDHEDQGCVDGDHLQPQAKRFKEDALHDNLSMGQISSTPPQHKDMVEDSFEMVVEDSENRDFHLEKESSQGGLEGSIPVENDHDEDVGIDRHGHSLDADNAFQHNQHEIAHNANKMPLSGDGLHQYSFVDEINRAEPRKSNAAPSVGTSDRLFVNGNKGKSDHSGQQKPSNSVSSNGFHRNTDADEREAGTDHLSEEDESNESDEYEQERVDVGLRKSHFLSSQYMLSHDSLAEANWTDQNLCIKCCKDGQLLVCGAGSCSLVIHENCLVFSPHFDERGDFYCPFCAYSLAISEYLEAKKKAYSARKELKLFIETRQEYRSNKHTQRLLSKRHGSSRQNEDKDLLNKFLDYENLVGEKRKQSNNRGQISEGNDHQFQKGKGKKKQVEPLASCIGVNSLCREEEPDVNVRTNHISTVEKEGEEVVQENSSGTELDINQHQVSVDPKYSVDNHLCKEKEIVSGSQRTDGRRQKAVCAISSDGGETSGDEDDKSISTNYFIRFRKRERQYTPAMPQSRRKKVPWTAHEEEILKEGVQKFASDGKYPWKDILEYGSSVFSNGRTTIDLKDKWRNMCKLSPKSK*