Information report for Potri.002G180800.1
Gene Details
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Functional Annotation
- Refseq: XP_006386664.1 — protein LHY
- Refseq: XP_024451481.1 — protein LHY
- TrEMBL: B9GRS2 — B9GRS2_POPTR; Uncharacterized protein
- STRING: POPTR_0002s18190.1 — (Populus trichocarpa)
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >Potri.002G180800.1|Populus_trichocarpa|MYB_related|Potri.002G180800.1
ATGGATACATACTCCGCAGGAGAAGACTTGGTTATTAAGACGAGGAAACCATATACAATTACCAAGCAACGAGAAAGATGGACAGAGGAGGAGCATAACAGGTTCCTAGAGGCCTTGAAGCTCTATGGACGAGCTTGGCAGCGAATCGAAGAACATATTGGTACAAAGACTGCCGTGCAAATCAGAAGTCATGCACAGAAGTTCTTTTCGAAGTTGGAGAAGGAGGCTGTTGCTAAAGGTGTTCCGATAGGAAAAGCACTTGAAATAGACATTCCACCACCACGTCCCAAAAGGAAACCAAGCAATCCTTATCCTCGAAAGACAGGTGTGGGTCCTCCCGCATCACAGGCAGGAGCAAAGGATGGAAAGCTTTTAACTTCAACTTCTTCTCCACATTGTAGGAAAGTTTTAGATTTGGAGAAAGAACCACGTCCTGAGAAACCTAATGGAGATGAGAGGCCAACCAATGCTAAGGAAAATCAGGATGACAATTGCTCAGAAGTATTTACCCTTCTCCAAGAAGCTCATTGTTCCTCTGTAGCTTCAGTCAACAAAAATTGTGTACCAGCACTAGAGGTTCTCAAAAAGACTAGCTCTTTCAGGGAGTTTGTACCTTCACCGAAGAAGGGAAATCATGATGCATGCAATGAATCCTTTATCACTGTCGAGCATGAAGCAAATCAAAAGTTGGACAGCTCTGATGCCAATCAGACAGTTTTGGATAATGGCACTGTTAAAGCTTCAAAATCAGAAAATTCTTGCTCTTTGCATGAGATATTGTTTCAGCAAAAGAAATCAGATGATTTTATTGGATCATTGCCAACAGATGAGATGAAAGCCATGCAGAACTATCCAAGGCATGTCCCTGTACACGTTCTAGATGGGAGCCTGGGAACATGTATGGAAACTCCCTCGGATTTGTCATTTCAGGATTCCATGTTTCATCCAGTAGGAGATATTCCAGCGTGTCCTATTTTATACTCACATCCTACTGGATCCACTACCACTGATCATCCAACTAATTTGCCAAGATCCTCTATGCATCAATCATTTCCATTTTTTCCTCCTCCATTTACCCCAACTCATCATAATCAAGATGACTACAGATCATTTCTCCACATATCCTCCACATTTTCGAGTCCCGTTGTATCTACTCTGCTACAAAACCCGGCAGCCCATGCTGCAGCAAGCTTTGCAGCTACCTTTTGGCCCTATGGAAATGTGGAGAGTTCCGCAGATTCTCCAGCATGTGCCCAAGAAGGTTTCCAATCGGGGCAAATAAACTCTGCTCCCAGTATGGCAGCTATTGCTGCTGCTACAGTGGCAGCAGCAACTGCATGGTGGGCAGCACATGGACTACTTCCCATATGTGCTCCTCTTCACACTGCCTTTGCCTGCCCTCCTGCTTCTGCAACTGCAATTCAGTCTGCGGATACTGATCAAGTTCCTCCAGCCAAGCCAGAAAGGAAGGAAACAACTCCTGATAATCCTCCTTTGCAAGGTCAAATACAGGACCTGGAGCACTCTGAAGCTGTGCAAGCTCAAAACTCTGCATCAAAACCACCAACGTTGTCATCATCAGATTCTGAAGAGAGTGGAGGCACAAAGCTAAACACTGCACCAAAAGTTACTGATCACGAGTTAAATTCAAAAGCTCCTGAGGTCCAGGATTCAGGCAAAACAAAGAGCAGAAAACAGGTTGACCGTTCTTCATGTGGTTCAAATACACCATCTAGCAGTGAAATTGAGACAGATGCATTAGAGAAGAATGAGAAAGGCAAGGAAGAGCCAAAAGAAGCTGATGCAAATCATCCAGCCTCTGAGTTGAACTGTCGCCGCAGCAGAAGTAGCAGCAGCATGAGTGATTCGTGGAAAGAGGTCTCCGAAGAGGGGCGGCTGGCATTTCAAGCACTATTCACCAGAGAGAGATTGCCCCAGAGCTTCTCACCTCCACATGATCTGAAGAGTAAGATGCACCAGAAGGAAGATACTGAAGAAAAGAAAAATCCAGATGAGAAAGATGGAGATGCGTCACTGTTAGATCTCAACAGCAAAACATGGGGTTACTGCTCTGGCTATCAAGAAGGGGAGAAAAATGCTGTAGTGCCTAGATGTGTAAACGATGGGGAGGAAGGGCTGCTGACTATTGGACTTGGACATGGAAATCTGAAGGCTCATCTAACCGGATTTAAACCTTACAAAAGGTGTTCACTGGAGGCCAAAGAAAGCAGGATGGGAACCACTGGTGGCCAGGGCGAGGAGAAAGGCCCCAAGAGGTTACGTTTGGAAAGGGAAGCTTCAGTTTGA
Protein Sequence:
- >Potri.002G180800.1|Populus_trichocarpa|MYB_related|Potri.002G180800.1
MDTYSAGEDLVIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEAVAKGVPIGKALEIDIPPPRPKRKPSNPYPRKTGVGPPASQAGAKDGKLLTSTSSPHCRKVLDLEKEPRPEKPNGDERPTNAKENQDDNCSEVFTLLQEAHCSSVASVNKNCVPALEVLKKTSSFREFVPSPKKGNHDACNESFITVEHEANQKLDSSDANQTVLDNGTVKASKSENSCSLHEILFQQKKSDDFIGSLPTDEMKAMQNYPRHVPVHVLDGSLGTCMETPSDLSFQDSMFHPVGDIPACPILYSHPTGSTTTDHPTNLPRSSMHQSFPFFPPPFTPTHHNQDDYRSFLHISSTFSSPVVSTLLQNPAAHAAASFAATFWPYGNVESSADSPACAQEGFQSGQINSAPSMAAIAAATVAAATAWWAAHGLLPICAPLHTAFACPPASATAIQSADTDQVPPAKPERKETTPDNPPLQGQIQDLEHSEAVQAQNSASKPPTLSSSDSEESGGTKLNTAPKVTDHELNSKAPEVQDSGKTKSRKQVDRSSCGSNTPSSSEIETDALEKNEKGKEEPKEADANHPASELNCRRSRSSSSMSDSWKEVSEEGRLAFQALFTRERLPQSFSPPHDLKSKMHQKEDTEEKKNPDEKDGDASLLDLNSKTWGYCSGYQEGEKNAVVPRCVNDGEEGLLTIGLGHGNLKAHLTGFKPYKRCSLEAKESRMGTTGGQGEEKGPKRLRLEREASV*