Information report for PK00291.3
Gene Details
Functional Annotation
- Refseq: XP_010096186.1 — SWI/SNF complex subunit SWI3D
- TrEMBL: W9R169 — W9R169_9ROSA; SWI/SNF complex subunit SWI3D
- STRING: XP_010096186.1 — (Morus notabilis)
- GO:0003677 — Molecular Function — DNA binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Sequences
CDS Sequence:
- >PK00291.3|Cannabis_sativa|MYB_related|PK00291.3
NNTTTCCACCCATTCCCACCAACTGGTCCTGCCACTGGTGGTGCTGATGATAATGTTGCTTCAGAAAAGGGTTCATTGGCTGATAAGTTGTATCACTTTGAAACCCTGCAATCTTCTAAGCCTGTTATTCCCAAAAATAATATATCAGCTCCAGCTGTGTCATCAAGACTGTTTCCCGAATCATCAATTGCTGAAGAGTTAATAAGGCCTGAGGGTCCAGCTGTCGAGTACCATTGCAATTCTTGTTCAGCTGATTGCTCACGCAAGCGCTACCATTGCCAGAAGCAGGCAGATTTTGATCTATGTACTGATTGCTTTAACAATGGGAAGTTTGACTCTGGTATGTCATCTTCGGATTTTATTCTCATGGAGCCTGGTGAGATGCAGGGTCTCAGTGGGGGAAAGTGGACCGATCAGGAGACTCTCCTCCTCCTTGAGGCATTAGAACTTTATAAAGAAAACTGGAATGAGATTGCTGAACATGTCGCTACGAAAACAAAAGCTCAATGCATATTACATTTTGTTCAAATGCCAATTGAGGATAGCTTTTTTGATAGTTGTGATGATATTGAAGCTGTGGATCCAGCTTCTAGTGATAAATTAAACCCCAAGGATGCTCTTGAAACAAATGATAGTGAGACTGCTATTAATGTAAATCAGTCCACTTCTTCCCCAATGGAAACTTCAAAAGAAGAAATGACTGAAGTTCAAGCTAGTCAGGACACTTCAAAACATGAAGATACAGACAAAGGAAAAGTTGACCAGGACACTTCAAAACTGGATGATGGCAGTGAATCTAAAGGTGGCAAGGATGCAGAAGAAAATTGTGCAATGAAGGCTCTCAAGGAAGCATTTGAAGCTGTTGGTTATCCTCTGATACCTGAACGACCATTTTCATTTGCTGAAGTGGGGAATCCTGCCATGGCATTGGCAGCTTTCCTGGCACATTTGGTTGGACCTGATGTTGCTACTGCTTCATCACACAATTCTTTAAAATCCCTATCTGGAAACTCCCCAGGCATTGAGCTGGCTTCAAGACACTGCTTTCTTTTGGAGGATCCACCAAATGACATTAAGGAACCAGCTGGGTTGCCTAGTGTGGTTGCTGAAGCTACTAATGAGAGCTTTGTGAATGAAAAAATCGAAGCAGACCTTCCGAAAGAAGATATACCAACTGATCATTGTGACAAGAAAAGTCAAGATTCTGTTCTTGAAGCGAAAACATTGGATGTCCCAAATGTTGAAACCTCCGAGATATATCACAGTGCGAAAGAACAAGATATTAAAGCTGGTAGTGATGAAGCTTCTGGTAGTGTAAGTACAGCAAACAAATCAAGCACTCCTGCGATAGTAAAGGATCAACCACTATCTACGGATGATTTACAATCTGAGGCAGAGATTCCGCCAAGTTTTGTGAAGGAGTCAGAAGCGAAAACAGAAGAGCCTCCTGAACCCAGAAAGACGTCAAAGGAAGTAGAAATGTCTGAAACTACCCCTGAAAAGAATGAGCTGCAAGAAACAGTTCCATCAGATGTATTAAAGGAACCTACCAATTCAGTAGATGCGCAAGTAGATGAACCTAATGATTCTTTGCATTCAAAAAATAATAAGGATCAGCATGTAACTGCCACTTCAGTTGGAAAACCTTCTTCTGAGGAACCAAGAGACATAGATATGGTGCCTCATTCGGGGAACTCAGAAAAGAATGAACCTTCACAGCCAGCTGAACCAAATGTAACAGGTGAAAAAGTTGTGGATCTTACTAAAGATCGTGACAAAAAGAATGGTATGGGTATAAAAGAAGACACCAAGATTGATAAAATAAAGTGTGCAGCTGTCTCTGCTATCTCTGCAGCAGCAGTGAAGGCCAAACTTCTAGCAGATGAGGAAGAAGACCAAATCCGACAACTTTCCATGTTACTGATAGAGAAGCAGTTGCTAAAACTGGAAACCAAGTTAGGGTTTTTTAATGAGATGGAAAATGTACTAATGAGGGTTAGGGAGCAATTAGATAGATCAAGGCAACGTCTTTACCATGAACGGGCGCAAATAATTGCAGCCAGACTTGGCTTACCCGCTTCCTCATCTCGAGGGGCGTCTTCATCTTTGCCTGCGAATAGGGTGAACATCAACGTTACTAACTCAGTTCAAAGGCCTCCATTTAGCATGGTTTCTCAGAGGCCTCCCTTGTCAAGACCCATGGGGACAGTGGCGCCTACCCCTTCAATACCATTGTCCACAACAACAGCAGGTAGCTCAATTGGACCTCCGAGCCAGGAAAAGCTTTCCTCTGTTTGA
Protein Sequence:
- >PK00291.3|Cannabis_sativa|MYB_related|PK00291.3
XFHPFPPTGPATGGADDNVASEKGSLADKLYHFETLQSSKPVIPKNNISAPAVSSRLFPESSIAEELIRPEGPAVEYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSSDFILMEPGEMQGLSGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIEDSFFDSCDDIEAVDPASSDKLNPKDALETNDSETAINVNQSTSSPMETSKEEMTEVQASQDTSKHEDTDKGKVDQDTSKLDDGSESKGGKDAEENCAMKALKEAFEAVGYPLIPERPFSFAEVGNPAMALAAFLAHLVGPDVATASSHNSLKSLSGNSPGIELASRHCFLLEDPPNDIKEPAGLPSVVAEATNESFVNEKIEADLPKEDIPTDHCDKKSQDSVLEAKTLDVPNVETSEIYHSAKEQDIKAGSDEASGSVSTANKSSTPAIVKDQPLSTDDLQSEAEIPPSFVKESEAKTEEPPEPRKTSKEVEMSETTPEKNELQETVPSDVLKEPTNSVDAQVDEPNDSLHSKNNKDQHVTATSVGKPSSEEPRDIDMVPHSGNSEKNEPSQPAEPNVTGEKVVDLTKDRDKKNGMGIKEDTKIDKIKCAAVSAISAAAVKAKLLADEEEDQIRQLSMLLIEKQLLKLETKLGFFNEMENVLMRVREQLDRSRQRLYHERAQIIAARLGLPASSSRGASSSLPANRVNINVTNSVQRPPFSMVSQRPPLSRPMGTVAPTPSIPLSTTTAGSSIGPPSQEKLSSV