Information report for PH01000356G1090
Gene Details
|
|
Functional Annotation
- Refseq: XP_015625433.1 — telomere-binding protein 1
- Swissprot: Q9LL45 — TBP1_ORYSJ; Telomere-binding protein 1
- TrEMBL: A0A0D9Z060 — A0A0D9Z060_9ORYZ; Uncharacterized protein
- STRING: OGLUM02G38510.4 — (Oryza glumipatula)
- GO:0032204 — Biological Process — regulation of telomere maintenance
- GO:0042162 — Molecular Function — telomeric DNA binding
- GO:0042803 — Molecular Function — protein homodimerization activity
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Brachypodium distachyon: Bradi3g55430.3.p, Bradi3g55430.2.p, Bradi3g55430.5.p, Bradi3g55430.4.p
- Hordeum vulgare: MLOC_53202.1
- Oryza sativa: RTBP1
- Setaria italica: Seita.5G468700.5.p, Seita.5G468700.3.p, Seita.5G468700.1.p, Seita.5G468700.6.p, Seita.5G468700.4.p, Seita.5G468700.2.p, Seita.7G135900.1.p
- Setaria viridis: Sevir.5G474900.5.p, Sevir.5G474900.4.p, Sevir.5G474900.1.p, Sevir.5G474900.8.p, Sevir.5G474900.7.p, Sevir.5G474900.3.p, Sevir.5G474900.2.p, Sevir.7G144300.1.p, Sevir.5G474900.6.p
- Triticum aestivum: Traes_6AL_E94233A40.1, Traes_6DL_5D47DC487.1
Sequences
CDS Sequence:
- >PH01000356G1090|Phyllostachys_heterocycla|MYB_related|PH01000356G1090
ATGGTAACCCAGGTAAAACGCTCCATAAGAAGAAATAAAAATGAGTTGCACGCGCTTGATTTGCTTGCGACAACTGCGGGAACGTTGTCAGCGGACCAGGATAATTCATCTAGCAGACCTAACATAAATGGAACAGCAGCAAGTTATGCTACAAACAGGAAATCAGTGGAAACAGAACAGTTTGATGAAGTCCTGCCGTTCAAGAGCGTAGCTGTGGAGAAAGATGGCTGCAAAGGATGTACAGTGGGTTGTGGTGGTGTCTGTGGCTTTCTTAGACAAATTAACATCTGCTTGGCCGAGAACTCATCAACCCAAAATGTTGCCGATTCAGTATTAGAGTCGGCAACAGCAAAGCCAGATGTGTTGGTTAAGGACTCTATGGTCAGTTGTACAAAATCATGTCGACTGGGTCGTGGTCTTGGCACAATTCCAGAGTATGGAACTATTGGAGTATGCCATCCTTGGTCCAAAAGATCAGCAGAAGTAAAACAAGTGCACCGAGCCAGACCCACAATGATCAGAAGTCAAGTAGATGGTAATGCCAAAGCTCTGCATAGTTTGGTTGGCACTATGGATCTGGATACCAAACTTCCTTCTGTGGTTAGCTCTGAAAGTAGCTCAGGAGTGCACCTGTGTGTCCATGACAGGGGCCATAACTCCTCTACCTTGTGTTGGGGTAAAGTGCAGCATGCTGCAGATAGAGATGATGACGAAAATTCTTACGGGTGCGTTCTTCCAAGCACCTCAGGAAATAAGGGTGGTTCTATGCCACATTATATAGGTGACTGTAGGATAAGGAGATTGTTTGCCACCAGGTTAAGGAAGGCAGCTCGTAATAAGATATGTGGAGAGATGTCCAATAAAGGTAGCAAGCTGAACTTTTGTGGAAAGAAGATATCCACTACACGTCGAAGGGTGCAACGAGCAATGTTGAAGAGGAAAATACTAGCTCAACGTTGCTTTGCAAAAACATCTGATGAAGGGATCCTAACTGAAATCAAGTTAACCATCAAGTCATTGAACATCCCTGAACTGCTAATCGAGATCCCTGAAAATGCAACAGTTGCTTCATTAAAGAGGACTGTAACGGATGCTGTTACTACTATAATTGAAGGCGGCCTCCGTGTCGGTGTTCTTCTTCAAGGAAAGAACATTCAAGATGACAACAAGACACTTCTTCAGGTTGGGATTTGCCACGGGGGAAAACTAGATAACATAGACTTTACGCTGGAATGTGAAGCTGGGCAAGATTCTCACCCTGGAGTAGAAGCACCGGAAGAAATTGATTTCGTTGGTGCAGATGTTGTGGAACCATTAGCTACGATGAAGTGCGAAGAACCTTTTCCTGAAACCAGGGTTGGCGATGACAACCAGCAGCAGCCTATGCAAGCTTTTCCAAACTGCACTCTGAGTGATCCTGCCGATTATCCTGTTGAATGGACCGCACAAGAAATATCAGCAAGCTCCCAAGCCATTATCCCTGTTGCAACTCCAGACGTAGATGCGCTTGTGCCTCTTTCTAGGTCAAAGCGGTTGGATTTGGGGCAAAGACGTACAAGAAGGCCCTTCTCTGTTGCTGAGGTGGAGGCTCTGGTAGAAGCCGTCGAACAGCTCGGAACTGGAAGGTGGAAAGACGTTAAATTCCACGGATTTGGCAATGCTGATCACAGGACCTATGTTGACCTGAAGGACAAGTGGAAGACCCTTGTGCGCACTGCAAGCATATCCCCACAACAAAGAAGAGGCAAGGCAATTCCGCAGGAGCTCCTTGACCGTGTGCTCGCAGCGCAGGCCTACTGGTCCCAGCAGCAGGCAAAGCTTCAGGGCAACCCTCCATTTCCTGAAATTTGCCCTGCCTAA
Protein Sequence:
- >PH01000356G1090|Phyllostachys_heterocycla|MYB_related|PH01000356G1090
MVTQVKRSIRRNKNELHALDLLATTAGTLSADQDNSSSRPNINGTAASYATNRKSVETEQFDEVLPFKSVAVEKDGCKGCTVGCGGVCGFLRQINICLAENSSTQNVADSVLESATAKPDVLVKDSMVSCTKSCRLGRGLGTIPEYGTIGVCHPWSKRSAEVKQVHRARPTMIRSQVDGNAKALHSLVGTMDLDTKLPSVVSSESSSGVHLCVHDRGHNSSTLCWGKVQHAADRDDDENSYGCVLPSTSGNKGGSMPHYIGDCRIRRLFATRLRKAARNKICGEMSNKGSKLNFCGKKISTTRRRVQRAMLKRKILAQRCFAKTSDEGILTEIKLTIKSLNIPELLIEIPENATVASLKRTVTDAVTTIIEGGLRVGVLLQGKNIQDDNKTLLQVGICHGGKLDNIDFTLECEAGQDSHPGVEAPEEIDFVGADVVEPLATMKCEEPFPETRVGDDNQQQPMQAFPNCTLSDPADYPVEWTAQEISASSQAIIPVATPDVDALVPLSRSKRLDLGQRRTRRPFSVAEVEALVEAVEQLGTGRWKDVKFHGFGNADHRTYVDLKDKWKTLVRTASISPQQRRGKAIPQELLDRVLAAQAYWSQQQAKLQGNPPFPEICPA*