Information report for PGSC0003DMP400041040
Gene Details
|
|
Functional Annotation
- Refseq: XP_006351323.1 — PREDICTED: uncharacterized protein LOC102589560
- Refseq: XP_006351325.1 — PREDICTED: uncharacterized protein LOC102589560
- TrEMBL: M1C6S9 — M1C6S9_SOLTU; Uncharacterized protein
- TrEMBL: M1C6T0 — M1C6T0_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400060973 — (Solanum tuberosum)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
- GO:0008270 — Molecular Function — zinc ion binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Cajanus cajan: C.cajan_24231
- Capsicum annuum: CA10g19550
- Cicer arietinum: XP_012567479.1, XP_004516067.1
- Citrus sinensis: orange1.1g003750m, orange1.1g005228m
- Juglans regia: WALNUT_00021724-RA
- Lotus japonicus: Lj0g3v0324039.1, Lj0g3v0324039.2
- Populus trichocarpa: Potri.016G053300.2, Potri.016G053300.1
- Solanum lycopersicum: Solyc10g080300.1.1
- Vitis vinifera: GSVIVT01033321001
- Ziziphus jujuba: XP_015899006.1
Sequences
CDS Sequence:
- >PGSC0003DMP400041040|Solanum_tuberosum|MYB_related|PGSC0003DMP400041040
ATGGTTTCCTTGAGAGTTTTAGAGAGCTTATTTGTTCAGAAAAACTCAGATGCAAATAGTGTCGCTTCAGTTCCAGGTGACAAAGTTGAACTTGATCCATCAAGGGACTGCGAAGATGTCCTTCGCTGCATATTGTTGGAGGTGTCTGCATCAAATCTAAAAACAGCTACGCCAGATATGTTCAAGTGGGATGTTCTGTCATTCATTATGAAAAAGAGATCTATCTTGCCAAAGTGTCACTTGCAACAATTTAAAGATGCCATTGTGGAATCGACGAATCCTTTTTCCACCTCCTTGAAAGAAAGAAGTGGATTGGAGTTGGGGAACCACTACAGAGACAGTGGTACTGCTGATGCTATTGATTCTGATGGCTTTAAGCAGGGACATGAAATAGGAGGTGTGAATACCCGACATGCTGCACCAACTGAGAACTTGGATACTTCAACACAGGGCAACAAGAATGGCCTGCAAGAAAATCAGCCTGGAAGCACTCTGCTGCCTGTTAAGAGGAGTTTTAATGCCCCTACTGCTTATGAAATAGAAGTTAATAAAACTAAAGCCACACCAGAGAAAAGTTCTGATCCATGTGCGAAGGCTGCCAAAAAGTTTAAGCAGGATGTTGCTGGTCCCATTCAGAACACTGTTCCTGATTTGATATCGTCTCAAAGAGATGGAGTCCCAGCAGAATCATGTGGAGGAAGTCAATCTATTGTTCAAAAAAGGAACTCGGAAGATGATGGTACCCTCAAAGCAAATGGATGCCTGAAGGATGGTAAAGCAAAGCATGCTGCATCAGCAAGTGTTTTATGTGGCATTGACTCTAGTATCAAGGATCTGTTGCCTCAAAGAATGAGTTCAGACAAGAAGTTCCAAAATATTGGAAGTAGCAGCAATTGTTGTGCTGAACTGGGAACATCAAGTGACTCATCCCTGCGTGTGATTCAGCAGGATTCTCGCACTTGTGGCTCCAAAGGTGACCTGGATTATAATCTTCCACGAGATCTGCAAAATGGCGAACCTTCTAATGCAGACAAAGAGAATATTGAGCAAAGTCGTGAATCTGAGTTCTCTGGTGATACTGATGAGTGTCACAATGAGAGTACTGATCTTGCTTCACAGAAAAATGATTTCTTGAACTTGCAATACACTCAGGGTGAAGATTCTTTGGCAACTGTTGATTGTACAGAACTTAATCTTTGTGTGAAGTGTAACGAGGGGGAAAACTTATTAGTTTGTAGTTCTGATACTTGCTCTTTGGTGGTTCATGAAAGTTGCTTGGGTTCTGTACCCAACTTTGATTACAAAGGAAGCTTCTATTGCCCCTTTTGTGCATATTCTCGAGCCATTTCTGAGTACCTGGAAGGTAAGAAGAAGGCCTCACTTGCTAGGAATGATTTGGCTGCATTTATTCGCTTTGGGGCTGGACAACAATCAAAGAAGTCACTACCTAGGTCACAAGGAATGAAGAAGCATCAATCTCAAGAGGATACAATTGTACAGTTGTGCCACAATGTAAAGGGTAAGAATTCATTGAATGAGGTCACAGAAGCAGGAAGTGCTCCAGCCGACAGGAGTTCTGTCGGAGCTCAAGTCATGCAAACCAGTGCACCTCAACCAGAGCCTTCTCTACCCCGCAATGAAAATGAGAGGAATTCATTGAATGAGATCACAGAAGCAGGAAGTGCTCCAGCCGACAGGAGTTCTGTCAGAGCTCAAGTCATGCAAACTGGTGCACCTCAACCAGAAACTTCTCTACCCCGCAATGAAAGTGGGAGGAATTCGTTGAATGAGGTCAGAGAAGCAGGAAGTGCTCCAGCCGACAGGAGTTCTGTCGGAGCTCAAGTCATGCAAACCGGTTCACCTCAACCAGAGGCTTCTCTACCTAAACAATGCTTAGTAGTTGGTCAACAACCCGACAAATCACCTCTTGGATGTCATAGATCAAGACAGAATCAGTCCAGAGAGGAAGAAGAATTGTGTCATGATGAGAATAGAAACAAAAATTCTTTGGAGAAGGCTGAACCAGGAAGTCGTTCAGTCACTAGAAATTCAATGCGTGCCGAGGTCACGCAGATCCATCCACCTCAACCACATGTTCCTCATGAACATGTGTGCCAAGAAAGTTCTTCTATAGAAGTAAGTTCTGAAGAAGAACAAGATGAGATAGGTTCCGGATACCATGTACAATTTAGGAATCAAGAAAACAATTCCTGTCCCTGGATTCCTCAACTGAGGAGGAAGAAGCTCCCATGGACAAAAATGGAGGAGGAAACATTAAAGGAGGGATTACTACGATTCTCACATTTTCATGATAGATGGAAGAGAATTTTGGAATTTGGAGGTGATGTTTTCCAGAAAGGTCGGACATCGGGGGACCTCAAAGATAAGTGGAGAAACATTAGCAAAGCAGGCGAGAAAGCAATATAA
Protein Sequence:
- >PGSC0003DMP400041040|Solanum_tuberosum|MYB_related|PGSC0003DMP400041040
MVSLRVLESLFVQKNSDANSVASVPGDKVELDPSRDCEDVLRCILLEVSASNLKTATPDMFKWDVLSFIMKKRSILPKCHLQQFKDAIVESTNPFSTSLKERSGLELGNHYRDSGTADAIDSDGFKQGHEIGGVNTRHAAPTENLDTSTQGNKNGLQENQPGSTLLPVKRSFNAPTAYEIEVNKTKATPEKSSDPCAKAAKKFKQDVAGPIQNTVPDLISSQRDGVPAESCGGSQSIVQKRNSEDDGTLKANGCLKDGKAKHAASASVLCGIDSSIKDLLPQRMSSDKKFQNIGSSSNCCAELGTSSDSSLRVIQQDSRTCGSKGDLDYNLPRDLQNGEPSNADKENIEQSRESEFSGDTDECHNESTDLASQKNDFLNLQYTQGEDSLATVDCTELNLCVKCNEGENLLVCSSDTCSLVVHESCLGSVPNFDYKGSFYCPFCAYSRAISEYLEGKKKASLARNDLAAFIRFGAGQQSKKSLPRSQGMKKHQSQEDTIVQLCHNVKGKNSLNEVTEAGSAPADRSSVGAQVMQTSAPQPEPSLPRNENERNSLNEITEAGSAPADRSSVRAQVMQTGAPQPETSLPRNESGRNSLNEVREAGSAPADRSSVGAQVMQTGSPQPEASLPKQCLVVGQQPDKSPLGCHRSRQNQSREEEELCHDENRNKNSLEKAEPGSRSVTRNSMRAEVTQIHPPQPHVPHEHVCQESSSIEVSSEEEQDEIGSGYHVQFRNQENNSCPWIPQLRRKKLPWTKMEEETLKEGLLRFSHFHDRWKRILEFGGDVFQKGRTSGDLKDKWRNISKAGEKAI*