Information report for PGSC0003DMP400011203
Gene Details
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Functional Annotation
- Refseq: XP_006359167.1 — PREDICTED: ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800
- TrEMBL: M1A773 — M1A773_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400016155 — (Solanum tuberosum)
- GO:0003677 — Molecular Function — DNA binding
- GO:0005515 — Molecular Function — protein binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Actinidia chinensis: Achn286431, Achn190451
- Citrullus lanatus: Cla015275
- Cucumis melo: MELO3C023515P1
- Cucumis sativus: Cucsa.050010.1
- Daucus carota: DCAR_029605
- Juglans regia: WALNUT_00013974-RA
- Manihot esculenta: Manes.10G150800.1.p
- Nicotiana benthamiana: Niben101Scf17137g00006.1, Niben101Scf04071g00009.1
- Nicotiana tabacum: XP_016456285.1, XP_016500778.1
- Petunia inflata: Peinf101Scf00152g02017.1
- Ricinus communis: 30226.m001997
- Solanum lycopersicum: Solyc01g073950.2.1
- Solanum melongena: Sme2.5_01173.1_g00003.1
- Vitis vinifera: GSVIVT01001371001
Sequences
CDS Sequence:
- >PGSC0003DMP400011203|Solanum_tuberosum|MYB_related|PGSC0003DMP400011203
ATGGAAAAAGACTCAGCAGCAGCTACAACGACGACGAAGAAGACGATATGGAGTACATGGGAAGAACTTTTGTTAGCGTTTGCTGTGAAAAGGCATGGGCTAAAGGACTGGGAATCTGTAGCCATGGAACTCCAAAACCGTATATCGTTACCTGCTTTATTGACCGCTCAAATTTGTAAGGAGAAATACAGGGACCTCCGCCGCCGCTTCATGAATAGCTATAACAATAGTTATGATGAAAAAATCATAGAACAGGATGTAGATGGAAATGGAGATGTAACGATTCCTTGGATTGAGGAGTTGAGACAACTACGGGTTGCTGAGCTTCAACAAGAGGTTCAACGCTACGATCTTTCGATCCAGTCGTTGGAGTTGAAAGTGAAAAAGATGGAGGAAGAGAGAGAACAGAGTTTGAAGGAGCAGAGTTTAGACGATGGCCAGAAACCAGATCTGGAGGATGTGAAGGAAGAGAGATCGCAAAACGACAAAAACAGCGGTGCTGATGTTAAGCCGGAGGATTCCACCGGAAAGCCCGTTTCGAGCGAGGAGTCAGACCGCGAAAACCGGTCGTTTAACGAGTCTAATTCGACGGAGAACAGAGAAACCGGTGTTAAAAATGAACCGGAACCGGTCGAGATCGGTGAAGACAAACCGGTTCAGGAGGTTAAACCGGTCAGTGAAGAGGACTCGTATAACGATAGCAGTTCAGATAGACAGGAGGAAAAGAAAGCCCGTCGCGACTCAGGCGATTTACGTGATACAGTGAGCGGGTCTAAGGAAGAGACTAAGGAAAACAGTGACGTGCAAAGCACGGCGACTTTAACGAAGAGAAAGCGGCAGCGCGGTGGCGATGGAGGTAGAAGCGGCGGAGATGCGGCAGAGATGGGTTCTCCAGCCGTTGGAATTAAAGGGGATGGTGCGGCGAAATCAGAGCCGTTAATTGAGTTTTTAGATATTATCAGGTCGCATAAGCGCGGCTCTGTATTCAAGCGCCGGCTAGACAGCCAGAAAACGGACAAGTACAAGAGTATGATCCGACAACACATGGATCTTGAAACGGTTCAAGCCCGGATTGATGACGGATCCTATTGCTCTTGCCCATCCAAATTATACTTGGACCTCCTACTCATCTTCAACAATGCCATCGTCTACTTCGCTAAGTCATCCTCAGAGTCAAGTGCAGCGAACGAACTCCGTGGCATTGTAATGGAAGAATTAAAAAAGACCAGAACCCAGTTGAAGGATGTATCACCATTAAAGATCCAACCCAAGCCCGAATTGGAGAGATCCGATTCTTTGCTTGCAAAACACAAGTCTACCGTTCCTATAGTAGTCTGTCGCAAGAGGAGCTCCATTTCAGCAAAAGCAGCAGCTTCTTCTGGTAATAACAAGCCAGAAAAACCAGCTGATAGTAAACCTCCTCTGAACCCAAAGCCACCTGCGATAAAATCTTCTTCAAATGAAGAAGAGAGTTCAATCAAGCTTGGGGTGAAAGAAAAGCCAGTGACTGGGGTAAGAAGTATGAGGAGGAGCAGCAAAGGCCGTTCGACTAATAATAATAATAATAATAATGCTTCACAATCCAACAGCAACCAAAACACGAATGCTAAGCAAAGCAATAGCAGCGGGGACAAAAAGGAAGAGGCGAAACCGGAGAAGAAGAAAGAAGAAAGTAAAAAACGAGGAGCTGCAGCGGACTTTTTGAAGAGGATAAAGAAGAATTCTCCTACTAAAGGAACGTTGGTGGAAGCGTTGAAGAATAATCCTCCAGAGGATGATGTTGTTGTTAAAGGTAACAAAAGAGATCAGCAAAAGAAAAAAGTTGATGAACGGAGAGAAGCTCCAGTGAGGCGAAGTGGTGCTAGCAAGGATGAAGGTAGTCCATCGAAAAGGAGCGTAGGTCGCCCACCAAAGAGAGGTGGAGGTGGTAGAGAAGTAGTTGTGCAGGAAAAACGTGGAAGGGAAAATAGTGAAAAAGATGATTCTACGAAACGGCCAAAGAAACGGTCAAGGAGGTAA
Protein Sequence:
- >PGSC0003DMP400011203|Solanum_tuberosum|MYB_related|PGSC0003DMP400011203
MEKDSAAATTTTKKTIWSTWEELLLAFAVKRHGLKDWESVAMELQNRISLPALLTAQICKEKYRDLRRRFMNSYNNSYDEKIIEQDVDGNGDVTIPWIEELRQLRVAELQQEVQRYDLSIQSLELKVKKMEEEREQSLKEQSLDDGQKPDLEDVKEERSQNDKNSGADVKPEDSTGKPVSSEESDRENRSFNESNSTENRETGVKNEPEPVEIGEDKPVQEVKPVSEEDSYNDSSSDRQEEKKARRDSGDLRDTVSGSKEETKENSDVQSTATLTKRKRQRGGDGGRSGGDAAEMGSPAVGIKGDGAAKSEPLIEFLDIIRSHKRGSVFKRRLDSQKTDKYKSMIRQHMDLETVQARIDDGSYCSCPSKLYLDLLLIFNNAIVYFAKSSSESSAANELRGIVMEELKKTRTQLKDVSPLKIQPKPELERSDSLLAKHKSTVPIVVCRKRSSISAKAAASSGNNKPEKPADSKPPLNPKPPAIKSSSNEEESSIKLGVKEKPVTGVRSMRRSSKGRSTNNNNNNNASQSNSNQNTNAKQSNSSGDKKEEAKPEKKKEESKKRGAAADFLKRIKKNSPTKGTLVEALKNNPPEDDVVVKGNKRDQQKKKVDERREAPVRRSGASKDEGSPSKRSVGRPPKRGGGGREVVVQEKRGRENSEKDDSTKRPKKRSRR*