Gene Details:

  • Gene ID: PGSC0003DMP400000664
  • Gene Name: LOC102587181
  • Gene Family: MYB_related Family
  • Description: MYB_related Family protein
  • Species: Solanum tuberosum
  • Source: MYB_related family gene from PlantTFDB

Protein Features:

Annotation Proteins:

  • Refseq:  XP_006353528.1  — PREDICTED: transcription factor MYB1R1-like
  • Swissprot:  Q7XC57  — MYBS3_ORYSJ; Transcription factor MYBS3
  • TrEMBL:  M0ZHI9  — M0ZHI9_SOLTU; Uncharacterized protein
  • STRING:  PGSC0003DMT400000902  — (Solanum tuberosum)

Gene Ontology:

  • GO:0006355  — Biological Process — regulation of transcription, DNA-templated
  • GO:0005634  — Cellular Component — nucleus
  • GO:0003677  — Molecular Function — DNA binding

Family Introduction:

  • A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.

Literature:

Sequences:

CDS Sequence:
  • >PGSC0003DMP400000664|Solanum_tuberosum|MYB_related|PGSC0003DMP400000664
    ATGGGGAGAAAGTGTTCACATTGTGGCTATATTGGTCATAATTCAAGAACTTGTAGCACTTTGAAATGTGCTATTAGTGATAATAATATTATTGGTGGATTAAGGCTTTTTGGAGTGCAACTTGATATTTCTAATTCTTGTTTTTCTAGTCATAATAATAATTTGAAGAAAAGTTTTAGTTTGGATTGTTTGTCTTTAACAAATAGCCACTTATTCTCATCATCTTCTTCTCCATCTCTTAATGAAAGTTGGGAAAAAAGTAGTACTACTTCTATTGATAATAATGGTTATATCTCTGATGGTACTCTTGTAGGTTGTGTTGGTGAAAAGAAGAAAGGTGTTCCATGGACAGAAGAGGAACATAGAAGATTCTTAAATGGACTTGAAAAGTTAGGTAAAGGAGATTGGAGAGGAATTTCAAGAAATTTTGTGACAACAAGGACTCCAACTCAAGTTGCAAGTCATGCTCAAAAATATTTTCTAAGACAATCAAGTCTCAACAAAAAGAAAAGACGTTCAAGTCTTTTTGATATGGCAAGGAGCAACAACAAATATGTAGATTTTGGTCATAATTGCCAAGAAGATGGTCAAGAAATTACAAGATCATCTCCATTAGATCTAAATTCATTTGGAGAAAAGTGTGAAAATTCTATTTGGAGTTATGGATCACAAAATTCTCATCACAATAAAGTTCCAAATAAGTCCATTTCTTCAAATGGAACTCTTGATTTGGAGCTAAGTCTTTCATCTCCAAGAAATAATATTGTGGAAAAAAATAATTCATCATCCTCCAAAACTACTTTCATGAATATTGGACCAATTAGAGTTACCTAA
Protein Sequence:
  • >PGSC0003DMP400000664|Solanum_tuberosum|MYB_related|PGSC0003DMP400000664
    MGRKCSHCGYIGHNSRTCSTLKCAISDNNIIGGLRLFGVQLDISNSCFSSHNNNLKKSFSLDCLSLTNSHLFSSSSSPSLNESWEKSSTTSIDNNGYISDGTLVGCVGEKKKGVPWTEEEHRRFLNGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRQSSLNKKKRRSSLFDMARSNNKYVDFGHNCQEDGQEITRSSPLDLNSFGEKCENSIWSYGSQNSHHNKVPNKSISSNGTLDLELSLSSPRNNIVEKNNSSSSKTTFMNIGPIRVT*