Gene Details:
- Gene ID: PGSC0003DMP400000454
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Solanum tuberosum
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_006339799.1 — PREDICTED: MYB-like transcription factor ETC3
- Refseq: XP_015067517.1 — MYB-like transcription factor ETC3
- Swissprot: Q8GV05 — TRY_ARATH; Transcription factor TRY
- TrEMBL: K4AZV3 — K4AZV3_SOLLC; MYB-like transcriptional factor TRY
- TrEMBL: M0ZH05 — M0ZH05_SOLTU; Uncharacterized protein
- STRING: Solyc01g095640.1.1 — (Solanum lycopersicum)
- STRING: PGSC0003DMT400000600 — (Solanum tuberosum)
Gene Ontology:
- GO:0010091 — Biological Process — trichome branching
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >PGSC0003DMP400000454|Solanum_tuberosum|MYB_related|PGSC0003DMP400000454
ATGAGCAAGCAAGAAGAAGATCTTATTTACAGGATGCACAAACTTGTTGGAGACAGGTGGGGGCTTATAGCAGGTAGAATACCAGGAAGAACAGCAGAAGAAATAGAAAGGTTTTGGATAATGAGACACAGTGATGGGTTTGCACACAAGAGAAGACAAACAATTAAGAAAAGTCTACCACCTACATAA
Protein Sequence:
- >PGSC0003DMP400000454|Solanum_tuberosum|MYB_related|PGSC0003DMP400000454
MSKQEEDLIYRMHKLVGDRWGLIAGRIPGRTAEEIERFWIMRHSDGFAHKRRQTIKKSLPPT*