Gene Details:
- Gene ID: PGSC0003DMP400000411
- Gene Family: MYB_related Family
- Description: MYB_related Family protein
- Species: Solanum tuberosum
- Source: MYB_related family gene from PlantTFDB
Protein Features:
- Gene3D: G3DSA:4.10.60.10
- PROSITE profile: PS51294
- SuperFamily: SSF46689
- TIGRFAMs: TIGR01557
- SMART: SM00717
- Gene3D: G3DSA:1.10.10.60
- Pfam: PF00249
- InterPro: IPR001878 IPR017930 IPR009057 IPR006447 IPR001005
Annotation Proteins:
- Refseq: XP_006339625.1 — PREDICTED: protein REVEILLE 6 isoform X1
- Swissprot: Q8H0W3 — RVE6_ARATH; Protein REVEILLE 6
- TrEMBL: M0ZGW9 — M0ZGW9_SOLTU; Uncharacterized protein
- STRING: PGSC0003DMT400000546 — (Solanum tuberosum)
Gene Ontology:
- GO:0006355 — Biological Process — regulation of transcription, DNA-templated
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0005634 — Cellular Component — nucleus
- GO:0003677 — Molecular Function — DNA binding
Family Introduction:
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature:
- A novel leaf-specific myb-related protein with a single binding repeat. DOI: 10.1016/s0378-1119(96)00521-5 ; PMID: 8996094
Sequences:
CDS Sequence:
- >PGSC0003DMP400000411|Solanum_tuberosum|MYB_related|PGSC0003DMP400000411
ATGGGGGATCCGATGAAAACGGGTCTTATGGGTTTGCATCCGGTACAATCGGGTACTAGTATACATGGGAATTTGAATTTGGATTCGAATACAGGCTTGGGAGTGGTGGTGTCCGATGATCACAGCAAGAAGACACGGAAGCCCTATACGATTACTAAGTCTAGAGAGAGCTGGACTGAGCAGGAGCATGACAAGTTTCTTGAAGCTCTTCAATTGTTCGACCGTGATTGGAAAAAGATTGAAGCATTTGTTGGGTCGAAGTCTGTTATCCAGATACGTAGCCATGCACAGAAATATTTTCTGAAGGTCCAGAAGAGTGGAACTAGTGAACATGTACCTCCCCCACGCCCAAAGAGAAAAGCTGCTCATCCTTATCCACAAAAAGCTCCTAAAAAGGTTATGTCCCAAGTTGGCAGCATCCAATTTCAACCTCCTGGTGCTTTGCCTGAACCAGGATTTGGTATCGGGCCTGATCCTTTATCTGTATCTGGAAATACAATTAATTTTTCTCCCTGGACTTACGACAATGTGCCTGCTATCAGCACGACACAGATGAGAAAAGATGATGCACAATTATCCAGTGGAGGAGTCATGCAAAATTGCAGCAGCAGCAGTAATGAGTACATCCCTAGGATTAATAAGACTAAAGAGAGCAATGACCAAAAGGAGAGCCAGAAGCAAATGAAAGTTATGCCAGACTTTGCTCAAGTTTACAGCTTCATCGGCAGTGTCTTTGATCCAAGTACTAGGGACCACTTACAGAGATTAAAAAAGATGGACCCCATTGATATTCAGACGGCACTGATGTTGATGAAGAATCTATCCTTCAATTTATCGAGCCCTGAATTTGAGGATCATAGGAGGTTGCTTTCATCATACGGCTTGGGTGCTGAAAAAGATAAAATGGGCCTTCCTATAAAAACTGATTTCAGAGGTAACGCAATCCAAGCTGTCTAA
Protein Sequence:
- >PGSC0003DMP400000411|Solanum_tuberosum|MYB_related|PGSC0003DMP400000411
MGDPMKTGLMGLHPVQSGTSIHGNLNLDSNTGLGVVVSDDHSKKTRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKSVIQIRSHAQKYFLKVQKSGTSEHVPPPRPKRKAAHPYPQKAPKKVMSQVGSIQFQPPGALPEPGFGIGPDPLSVSGNTINFSPWTYDNVPAISTTQMRKDDAQLSSGGVMQNCSSSSNEYIPRINKTKESNDQKESQKQMKVMPDFAQVYSFIGSVFDPSTRDHLQRLKKMDPIDIQTALMLMKNLSFNLSSPEFEDHRRLLSSYGLGAEKDKMGLPIKTDFRGNAIQAV*