Information report for PEQU_07911
Gene Details
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Functional Annotation
- Refseq: XP_020581341.1 — protein CCA1-like
- Refseq: XP_020581342.1 — protein CCA1-like
- TrEMBL: A0A2I0X2B1 — A0A2I0X2B1_9ASPA; Protein LHY
- GO:0009409 — Biological Process — response to cold
- GO:0009651 — Biological Process — response to salt stress
- GO:0009723 — Biological Process — response to ethylene
- GO:0009733 — Biological Process — response to auxin
- GO:0009737 — Biological Process — response to abscisic acid
- GO:0009739 — Biological Process — response to gibberellin
- GO:0009751 — Biological Process — response to salicylic acid
- GO:0009753 — Biological Process — response to jasmonic acid
- GO:0042754 — Biological Process — negative regulation of circadian rhythm
- GO:0043433 — Biological Process — negative regulation of sequence-specific DNA binding transcription factor activity
- GO:0046686 — Biological Process — response to cadmium ion
- GO:0048574 — Biological Process — long-day photoperiodism, flowering
- GO:0003700 — Molecular Function — transcription factor activity, sequence-specific DNA binding
- GO:0044212 — Molecular Function — transcription regulatory region DNA binding
Family Introduction
- A novel myb-like gene (AtmybL2) was isolated from an Arabidopsis thaliana cDNA library. The single copy gene was localised on chromosome I. A gene specific transcript is preferentially found in leaves. The predicted gene product consists of a conservative N-terminal myb-domain known to be involved in DNA-binding and a unique proline-rich C-terminal part. Remarkably, the myb-domain includes only one of the typical two or three tryptophan repeats found in other myb-like proteins.
Literature and News
Gene Resources
Homologs
- Musa acuminata: Ma10_g07650
- Oryza sativa: LOC_Os08g06110, OsCCA1;Nhd1
- Panicum virgatum: Pavir.6KG070500.1.p
- Setaria italica: Seita.6G055700.1.p
- Setaria viridis: SEVIR_6G053100v2, Sevir.6G053100.1.p
- Triticum aestivum: Traes_7DL_310E46F15.3
- Vitis vinifera: VIT_15s0048g02410
Sequences
CDS Sequence:
- >PEQU_07911|Phalaenopsis_equestris|MYB_related|PEQU_07911
ATGGAGATGAACTCGTTCGGAGAAGATCTGGTGGTGAAGGCGAGAAAGCCTTACACGATCACGAAACAGCGGGAGAGGTGGACTGAGGAAGAGCACGGCCGGTTCCTGGAAGCTTTGAAACTGTATGGTAGGGCATGGCAACGCATAGAAGAGCATATTGGTACTAAGACAGCTATCCAAATCAGGAGCCATGCTCAAAAATTCTTCACTAAGTTGGAGAAAGAAGCTGTTGCGACAGGTATTCCTCTAGGGCGAGTTCATGATATAGATATACCTCCCCCGCGGCCTAAGAAAAAGCCAAACTATCCATACCCTCGAAAAATCGGTTCCTGTTCTGCCCCTTCTCTCATTGAAGCAGCTGATGAGAAAACCTTAAAAACTGTGAATCCCATCCCCCAGGAAATAAACAAACAAGAGGCCTCTGTTGTAGCTAAATCACCGCATCAAACAAAAGAATACTGTGATGAGGCTCGTTGTTCAGTAGTTCTAAATCTTTTTCAAGAGGCTCCGTCAGCTTCCATCGCCTCCAGAGACAAGGCCTCCAAAAGCCAATTAAGCTTCAGAGAGTATGTTCCCACGGCCATGCCGTTAAAGGAACCACCCTCTTTGAAAAGATCTTCACTGACGATCGAAGTAAACATGGAATCAACCTCGAATGGAATGACTGAATGTGATCAGGATCTACGAAGGACAAGCGGAATCAACATGGAACTGCATGCCTTATCAGCAAGTTCTGGTAATGGGGAAACATCTGGTGCTCAGAAGCAACCGAAGAATCAATCAGACACTAACCGTGAAGCTAAGGCGATGCACATAAAGTGTGTTGATGGATGTAACCTTAAAACAACGCTTGAGAATGGATATTCCTCCTCTAGTGCTAACCCATTAATGAACCACACAATTCCAGCAGCTCCTGCTTTCCATTCCTGTTCAGCAACGTCCTATATTTCTCATCCATTTCCAACCTTTCCATCACTGTCACCGGCTCAGTTACAAACCTCTCATGATTTCTACAGATCTTTCCTTGGCATGTCATCAACGTTTTCTAGCGAAATCGTTTCAGCCTTGCTGCGATATTCGGCCGGTCATGCAGCAGCATGTATGTCAGCAGCATCACACTGGCATTCTGATGAAATGGATTCTTCCAAGGTGGAAGCTATTGCGGCTGCTACCGTTGCTGCTGCATCAGCATGGTGGACAACTAACGGGCTCATCCCATTTTTTTCTCCTATCCATGCTTCAGGCTTTGCATTTTCTCCACCAGCCACATCATTTCCTGTGATGAACACAGATCAGACTCCACAAGAAAAAATGGAGCGGCATGAAACATACCAAAACTCAAGCCTTGATCAAACAGCTGTTGTATCATCACCATCATTGTCATCATCATCAAACTTGGAGGAAAATGAAAAAAATTTCTCAAATTTCAACAATTTCAAACCATTATCTGATACTGCATATCATGATTCAGACAGGGCAAAGATCAACAAACACGAACGTTCTTCTTGTGGCTCCAACACAACTTCCAGCAGCGAAATCGAACGATTCACTTCTATTAAGAAAAATGGTGAAACGAAAGATGCGACTATACAAGCACAGACTGAAAATCTTCAAGATGGGGAAGTCAACACTCGCCGCGGTCGAAGTAGTTCATGCAGTAATGAAACATGGAAAGAGGTCTCCCAAGAGGGTCGACTAGCTTTTCAAGCGCTCTTCACCAGAGATATCCTGCCACAGTCCTTTGCAACTCAACTTGATAAACTTGAATCGGGATTGCATGAGGAGGAGATGGGGAGGACTGGAAGGGATCAAACCACCCAAAACCATTCCCTTCCAATCGAAATTAAACACGGAAACCTTAAGGTGAGGCGAACCGGTTTTAAACCTTACAAAAGGTGCTCGGCGGAGGCTGGGGTTAATAATTATTCAGCTAAAGATGAAACAAATAATAAGAAAATTCGTATGGAAGGATGA
Protein Sequence:
- >PEQU_07911|Phalaenopsis_equestris|MYB_related|PEQU_07911
MEMNSFGEDLVVKARKPYTITKQRERWTEEEHGRFLEALKLYGRAWQRIEEHIGTKTAIQIRSHAQKFFTKLEKEAVATGIPLGRVHDIDIPPPRPKKKPNYPYPRKIGSCSAPSLIEAADEKTLKTVNPIPQEINKQEASVVAKSPHQTKEYCDEARCSVVLNLFQEAPSASIASRDKASKSQLSFREYVPTAMPLKEPPSLKRSSLTIEVNMESTSNGMTECDQDLRRTSGINMELHALSASSGNGETSGAQKQPKNQSDTNREAKAMHIKCVDGCNLKTTLENGYSSSSANPLMNHTIPAAPAFHSCSATSYISHPFPTFPSLSPAQLQTSHDFYRSFLGMSSTFSSEIVSALLRYSAGHAAACMSAASHWHSDEMDSSKVEAIAAATVAAASAWWTTNGLIPFFSPIHASGFAFSPPATSFPVMNTDQTPQEKMERHETYQNSSLDQTAVVSSPSLSSSSNLEENEKNFSNFNNFKPLSDTAYHDSDRAKINKHERSSCGSNTTSSSEIERFTSIKKNGETKDATIQAQTENLQDGEVNTRRGRSSSCSNETWKEVSQEGRLAFQALFTRDILPQSFATQLDKLESGLHEEEMGRTGRDQTTQNHSLPIEIKHGNLKVRRTGFKPYKRCSAEAGVNNYSAKDETNNKKIRMEG